Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0592350 Oryza sativa ssp. japonica HOM05D003165 ORTHO05D003589 3.0e-27 124.4 62 100.0
Zm00001eb435330 Zea mays HOM05D003165 ORTHO05D003589 3.7e-25 117.5 62 95.2
Zm00001eb435800 Zea mays HOM05D003165 ORTHO05D003589 3.7e-25 117.5 62 95.2
Zm00001eb436880 Zea mays HOM05D003165 ORTHO05D003589 3.7e-25 117.5 62 95.2
Zm00001eb437300 Zea mays HOM05D003165 ORTHO05D003589 3.7e-25 117.5 62 95.2
Zm00001eb437760 Zea mays HOM05D003165 ORTHO05D003589 3.7e-25 117.5 62 95.2
Zm00001eb438270 Zea mays HOM05D003165 ORTHO05D003589 3.7e-25 117.5 62 95.2
Zm00001eb435610 Zea mays HOM05D003165 ORTHO05D003589 1.1e-24 115.9 62 93.5
CSS0048851 Camellia sinensis var. sinensis HOM05D003165 ORTHO05D003589 3.6e-20 100.9 62 82.3
Gohir.1Z049480 Gossypium hirsutum HOM05D003165 ORTHO05D003589 3.6e-20 100.9 62 80.6
Gohir.A04G039135 Gossypium hirsutum HOM05D003165 ORTHO05D003589 3.6e-20 100.9 62 80.6
Gohir.A01G139684 Gossypium hirsutum HOM05D003165 ORTHO05D003589 4.7e-20 100.5 62 79.0
Medtr4g050880 Medicago truncatula HOM05D003165 ORTHO05D003589 4.7e-20 100.5 62 80.6
Nn020s41494 Nelumbo nucifera HOM05D003165 ORTHO05D003589 8.0e-20 99.8 62 82.3
Hma1.2p1_4210F.1_g338473 Hydrangea macrophylla HOM05D003165 ORTHO05D003589 3.1e-19 97.8 62 79.0
PSO548G0059 Papaver somniferum HOM05D003165 ORTHO05D003589 3.1e-19 97.8 62 79.0
Gorai.009G320900 Gossypium raimondii HOM05D003165 ORTHO05D003589 4.0e-19 97.4 62 75.8
DCAR_032467 Daucus carota HOM05D003165 ORTHO05D003589 1.5e-18 95.5 62 77.4
Potri.013G138100 Populus trichocarpa HOM05D003165 ORTHO05D003589 2.6e-18 94.7 62 75.8
Lalb_Chr07g0192871 Lupinus albus HOM05D003165 ORTHO05D003589 4.4e-18 94.0 62 75.8
HanXRQChr01g0011841 Helianthus annuus HOM05D003165 ORTHO05D003589 5.8e-18 93.6 62 79.0
RcHm_v2.0_CPg0502501 Rosa chinensis HOM05D003165 ORTHO05D003589 9.8e-18 92.8 62 77.4
HanXRQChr00c0126g0571841 Helianthus annuus HOM05D003165 ORTHO05D003589 2.9e-17 91.3 62 77.4
HanXRQCPg0579761 Helianthus annuus HOM05D003165 ORTHO05D003589 2.9e-17 91.3 62 77.4
SalBow1G5840 Salvia bowleyana HOM05D003165 ORTHO05D003589 2.9e-17 91.3 62 79.0
CAN.G210.10 Capsicum annuum HOM05D003165 ORTHO05D003589 4.9e-17 90.5 62 74.2
CAN.G612.7 Capsicum annuum HOM05D003165 ORTHO05D003589 4.9e-17 90.5 62 74.2
CAN.G741.20 Capsicum annuum HOM05D003165 ORTHO05D003589 4.9e-17 90.5 62 74.2
Sed0022707 Sechium edule HOM05D003165 ORTHO05D003589 4.9e-17 90.5 62 75.8
SalBow3G1661 Salvia bowleyana HOM05D003165 ORTHO05D003589 6.4e-17 90.1 62 77.4
SalBow3G1899 Salvia bowleyana HOM05D003165 ORTHO05D003589 6.4e-17 90.1 62 77.4
BolC2t10577H Brassica oleracea HOM05D003165 ORTHO05D003589 1.1e-16 89.4 62 71.0
BolC7t41029H Brassica oleracea HOM05D003165 ORTHO05D003589 1.1e-16 89.4 62 71.0
BolSC37t60775H Brassica oleracea HOM05D003165 ORTHO05D003589 1.1e-16 89.4 62 71.0
BolSC45t60883H Brassica oleracea HOM05D003165 ORTHO05D003589 1.1e-16 89.4 62 71.0
BolSC45t60931H Brassica oleracea HOM05D003165 ORTHO05D003589 1.1e-16 89.4 62 71.0
BolSC46t60980H Brassica oleracea HOM05D003165 ORTHO05D003589 1.1e-16 89.4 62 71.0
BolSC49t61204H Brassica oleracea HOM05D003165 ORTHO05D003589 1.1e-16 89.4 62 71.0
BraA07t28392Z Brassica rapa HOM05D003165 ORTHO05D003589 1.1e-16 89.4 62 71.0
BraSC151t45688Z Brassica rapa HOM05D003165 ORTHO05D003589 1.1e-16 89.4 62 71.0
BraSC59t46517Z Brassica rapa HOM05D003165 ORTHO05D003589 1.1e-16 89.4 62 71.0
Migut.D01333 Erythranthe guttata HOM05D003165 ORTHO05D003589 1.1e-16 89.4 62 75.8
Migut.G00430 Erythranthe guttata HOM05D003165 ORTHO05D003589 1.1e-16 89.4 62 75.8
Gohir.D03G053280 Gossypium hirsutum HOM05D003165 ORTHO05D003589 1.1e-16 89.4 57 77.2
HanXRQChr17g0546761 Helianthus annuus HOM05D003165 ORTHO05D003589 1.9e-16 88.6 61 75.4
PGR111G0090 Punica granatum HOM05D003165 ORTHO05D003589 2.4e-16 88.2 62 75.8
CAN.G43.5 Capsicum annuum HOM05D003165 ORTHO05D003589 5.4e-16 87.0 62 69.4
CARHR281860 Cardamine hirsuta HOM05D003165 ORTHO05D003589 5.4e-16 87.0 62 69.4
BolSC29t60523H Brassica oleracea HOM05D003165 ORTHO05D003589 7.0e-16 86.7 60 70.0
CAN.G612.9 Capsicum annuum HOM05D003165 ORTHO05D003589 9.2e-16 86.3 62 71.0
ATCG00070 Arabidopsis thaliana HOM05D003165 ORTHO05D003589 2.0e-15 85.1 62 69.4
arahy.Tifrunner.gnm1.ann1.IBW0TW Arachis hypogaea HOM05D003165 ORTHO05D003589 2.7e-15 84.7 58 74.1
CAN.G68.4 Capsicum annuum HOM05D003165 ORTHO05D003589 2.7e-15 84.7 62 66.1
Solyc00g500049.1 Solanum lycopersicum HOM05D003165 ORTHO05D003589 2.7e-15 84.7 59 71.2
Solyc00g500132.1 Solanum lycopersicum HOM05D003165 ORTHO05D003589 2.7e-15 84.7 59 71.2
Solyc00g500202.1 Solanum lycopersicum HOM05D003165 ORTHO05D003589 2.7e-15 84.7 59 71.2
Solyc00g500331.1 Solanum lycopersicum HOM05D003165 ORTHO05D003589 2.7e-15 84.7 59 71.2
GSVIVG01037458001 Vitis vinifera HOM05D003165 ORTHO05D003589 4.6e-15 84.0 62 67.7
arahy.Tifrunner.gnm1.ann1.CR1XRQ Arachis hypogaea HOM05D003165 ORTHO05D009557 7.8e-15 83.2 57 73.7
Solyc00g500293.1 Solanum lycopersicum HOM05D003165 ORTHO05D003589 1.3e-14 82.4 57 71.9
Hund07985 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund08203 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund08798 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund11180 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund12720 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund12847 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund19323 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund22544 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund22777 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund26849 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund27475 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund27650 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund27674 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund27695 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund27740 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund27809 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund27837 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund27879 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund27888 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund27933 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund27948 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund28041 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund28062 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund28127 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund28256 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund28320 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund28326 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund28533 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund28601 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund28648 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund28774 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund28899 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund28908 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund28967 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund28986 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund28990 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund28995 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund28999 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund29003 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund29045 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund29066 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund29158 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund29224 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund29236 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund29258 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund29295 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund29298 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund29301 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund29304 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund29322 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund29329 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund29346 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund29658 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund29688 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund30268 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund30351 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund30506 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund31022 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
Hund31232 Selenicereus undatus HOM05D003165 ORTHO05D003589 2.3e-14 81.6 57 75.4
LjContig00318g0024148 Lotus japonicus HOM05D003165 ORTHO05D003589 3.0e-14 81.3 58 72.4
Hund27862 Selenicereus undatus HOM05D003165 ORTHO05D003589 4.3e-13 77.4 48 77.1
Gohir.1Z050692 Gossypium hirsutum HOM05D003165 ORTHO05D003589 2.8e-12 74.7 40 92.5
Hund01831 Selenicereus undatus HOM05D003165 ORTHO05D003589 4.7e-12 73.9 56 69.6
Lsat_1_v5_gn_5_110781 Lactuca sativa HOM05D000743 ORTHO05D003589 8.1e-12 73.2 55 72.7
CAN.G485.2 Capsicum annuum HOM05D003165 ORTHO05D003589 2.3e-11 71.6 60 63.3
Peaxi162Scf00219g00034 Petunia axillaris HOM05D003165 ORTHO05D003589 3.4e-10 67.8 57 63.2
CAN.G364.3 Capsicum annuum HOM05D003165 ORTHO05D003589 5.8e-10 67.0 62 58.1
Hund29292 Selenicereus undatus HOM05D003165 ORTHO05D003589 3.7e-09 64.3 37 83.8
Gohir.A08G117233 Gossypium hirsutum HOM05D003165 ORTHO05D003589 1.9e-08 62.0 52 67.3
arahy.Tifrunner.gnm1.ann1.5MH7M9 Arachis hypogaea HOM05D003165 ORTHO05D003589 1.7e-06 55.5 43 62.8
Glyma.12G095600 Glycine max HOM05D003165 ORTHO05D003589 6.6e-06 53.5 42 64.3
CAN.G1872.7 Capsicum annuum HOM05D003165 ORTHO05D003589 8.6e-06 53.1 42 61.9


User provided reference genes

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