Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0579400 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D012693 2.5e-237 825.1 422 100.0
Os11g0598300 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D012693 7.4e-234 813.5 422 98.8
Os11g0597400 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D012693 1.1e-112 411.0 297 76.4
Os11g0598500 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D012693 2.5e-112 409.8 296 75.0
Zm00001eb406540 Zea mays HOM05D000011 ORTHO05D012693 1.1e-104 384.4 425 55.3
Os06g0276300 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D012693 1.3e-84 317.8 526 42.8
Os11g0645800 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D012693 7.0e-83 312.0 515 43.1
Os11g0647866 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D012693 3.8e-81 306.2 516 43.2
Zm00001eb355100 Zea mays HOM05D000011 ORTHO05D012693 6.8e-78 295.4 436 47.0
Zm00001eb416830 Zea mays HOM05D000011 ORTHO05D012693 2.0e-77 293.9 520 41.5
Os11g0652100 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D012693 9.8e-77 291.6 434 44.7
Os11g0655700 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D012693 5.1e-41 172.9 293 42.3
Os07g0141700 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D012693 7.1e-35 152.5 279 38.4
Os11g0654100 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D012693 3.0e-33 147.1 284 37.0
Os11g0646300 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D012693 3.2e-27 127.1 294 34.7
Os11g0655300 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D012693 6.0e-26 122.9 291 33.3
Os07g0531900 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D012693 1.3e-23 115.2 289 36.3
Os11g0653300 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D037098 2.1e-23 114.4 314 30.9
Zm00001eb339320 Zea mays HOM05D000011 ORTHO05D037098 4.8e-23 113.2 307 31.6
Os11g0579100 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D012693 9.0e-22 109.0 290 36.9
Os11g0654800 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D037098 2.9e-20 104.0 280 34.3
Os06g0158300 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 2.1e-10 71.2 197 29.4
COL.COLO4_26674 Corchorus olitorius HOM05D000011 ORTHO05D000157 2.7e-10 70.9 208 32.7
Aqoxy2G01097 Aquilegia oxysepala HOM05D000011 ORTHO05D000157 2.5e-08 64.3 285 27.4
QL12p000213 Quercus lobata HOM05D000011 ORTHO05D000157 3.3e-08 63.9 218 31.7
QL08p002431 Quercus lobata HOM05D000011 ORTHO05D000157 1.3e-07 62.0 225 28.9
Os09g0517200 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 1.7e-07 61.6 322 28.3
QL08p002477 Quercus lobata HOM05D000011 ORTHO05D000157 2.8e-07 60.8 248 27.4
Os06g0286500 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 6.3e-07 59.7 232 27.2
CSS0033798 Camellia sinensis var. sinensis HOM05D000011 ORTHO05D000157 8.2e-07 59.3 220 26.8
COL.COLO4_29218 Corchorus olitorius HOM05D000011 ORTHO05D000157 1.4e-06 58.5 226 28.8
Potri.003G099000 Populus trichocarpa HOM05D000011 ORTHO05D000157 1.4e-06 58.5 248 31.0
Glyma.20G042400 Glycine max HOM05D000011 ORTHO05D000157 1.8e-06 58.2 292 25.7
QL09p010187 Quercus lobata HOM05D000011 ORTHO05D000157 1.8e-06 58.2 225 28.0
arahy.Tifrunner.gnm1.ann1.2JZ6N1 Arachis hypogaea HOM05D000011 ORTHO05D000157 2.4e-06 57.8 224 27.7
arahy.Tifrunner.gnm1.ann1.K1RG44 Arachis hypogaea HOM05D000011 ORTHO05D000157 2.4e-06 57.8 224 27.7
Zm00001eb200740 Zea mays HOM05D000011 ORTHO05D018062 3.1e-06 57.4 319 25.4
arahy.Tifrunner.gnm1.ann1.6QC6B5 Arachis hypogaea HOM05D000011 ORTHO05D000157 4.1e-06 57.0 224 27.2
arahy.Tifrunner.gnm1.ann1.GU9D1B Arachis hypogaea HOM05D000011 ORTHO05D000157 4.1e-06 57.0 224 27.2
Os12g0198900 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 4.1e-06 57.0 329 26.1
CiPaw.11G100300 Carya illinoinensis HOM05D000011 ORTHO05D000157 6.9e-06 56.2 216 29.2
Nn5g28381 Nelumbo nucifera HOM05D000011 ORTHO05D000157 9.1e-06 55.8 230 28.3


User provided reference genes

Program Settings