Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0557400 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D300655 2.5e-169 598.6 283 100.0
Os02g0492500 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D298169 2.6e-41 173.3 273 36.6
Os09g0567000 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D297207 1.5e-36 157.5 273 37.4
Os02g0113900 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D294256 3.8e-32 142.9 259 34.0
Os02g0113300 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D301167 4.2e-31 139.4 264 34.8
Os02g0113800 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D301000 7.1e-31 138.7 265 36.2
Os02g0793400 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D298023 1.6e-30 137.5 231 34.6
Os09g0558600 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D294796 1.3e-29 134.4 268 34.0
SGA_v2.0_scaffold112G31661 Striga asiatica HOM05D009542 ORTHO05D030322 1.9e-28 130.6 258 34.5
SGA_v2.0_scaffold555G52903 Striga asiatica HOM05D009542 ORTHO05D030322 1.9e-28 130.6 258 34.5
SGA_v2.0_scaffold5524G54649 Striga asiatica HOM05D009542 ORTHO05D030322 2.5e-28 130.2 255 35.3
Os03g0176800 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D294036 1.5e-25 120.9 231 31.2
Os06g0489900 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D297815 2.9e-24 116.7 308 29.9
Os12g0540000 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D293887 6.5e-24 115.5 254 30.3
Os01g0776800 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D030322 3.2e-23 113.2 289 30.1
Os06g0720700 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D299104 3.5e-22 109.8 270 30.0
Os06g0720400 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D294711 3.0e-21 106.7 270 29.6
Os06g0722450 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D293796 3.0e-21 106.7 270 29.6
Os06g0722700 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D297080 3.0e-21 106.7 270 29.6
Os06g0723900 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D301154 3.0e-21 106.7 270 29.6
Os06g0719600 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D295390 6.7e-21 105.5 270 29.6
Os07g0633300 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D296036 1.3e-19 101.3 269 28.3
Os10g0458300 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D297170 1.3e-16 91.3 271 28.0
Os03g0173700 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D301692 1.9e-15 87.4 300 25.3
Os07g0258000 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D301337 1.1e-12 78.2 130 37.7
Os05g0548700 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D295144 5.7e-12 75.9 79 48.1
Os04g0388000 Oryza sativa ssp. japonica HOM05D032120 ORTHO05D300183 3.8e-08 63.2 217 24.0
Os06g0722100 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D293739 8.5e-08 62.0 90 38.9
Os12g0529200 Oryza sativa ssp. japonica HOM05D023125 ORTHO05D295081 8.5e-08 62.0 236 26.7
Os01g0119500 Oryza sativa ssp. japonica HOM05D020165 ORTHO05D025971 1.6e-06 57.8 212 27.4


User provided reference genes

Program Settings