Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0550900 Oryza sativa ssp. japonica HOM05D005370 ORTHO05D006659 1.3e-208 729.6 376 100.0
Zm00001eb201750 Zea mays HOM05D005370 ORTHO05D006659 2.9e-64 250.0 256 57.4
Duzib052G0322 Durio zibethinus HOM05D005370 ORTHO05D006659 5.0e-32 142.9 269 34.6
Potri.002G045500 Populus trichocarpa HOM05D005370 ORTHO05D006659 7.3e-31 139.0 256 37.1
COL.COLO4_15774 Corchorus olitorius HOM05D005370 ORTHO05D006659 3.6e-30 136.7 252 36.1
Sabra02G0036500 Salix brachista HOM05D005370 ORTHO05D006659 2.3e-29 134.0 256 37.5
Gorai.005G046600 Gossypium raimondii HOM05D005370 ORTHO05D006659 5.2e-29 132.9 244 37.3
Gohir.A02G035301 Gossypium hirsutum HOM05D005370 ORTHO05D006659 6.8e-29 132.5 245 38.4
Gohir.D02G042266 Gossypium hirsutum HOM05D005370 ORTHO05D006659 2.0e-28 131.0 244 37.3
GSVIVG01018102001 Vitis vinifera HOM05D005370 ORTHO05D006659 2.6e-28 130.6 252 35.3
Prupe.1G175900 Prunus persica HOM05D005370 ORTHO05D006659 7.5e-28 129.0 252 33.7
PSO210G0029 Papaver somniferum HOM05D005370 ORTHO05D006659 9.8e-28 128.6 246 35.4
Nn3g19501 Nelumbo nucifera HOM05D005370 ORTHO05D006659 1.7e-27 127.9 260 35.0
RcHm_v2.0_Chr4g0389631 Rosa chinensis HOM05D005370 ORTHO05D006659 1.7e-27 127.9 252 32.1
Sed0023556 Sechium edule HOM05D005370 ORTHO05D006659 1.7e-27 127.9 257 35.8
AUR62011949 Chenopodium quinoa HOM05D005370 ORTHO05D006659 2.2e-27 127.5 258 35.7
FvH4_4g02310 Fragaria vesca HOM05D005370 ORTHO05D006659 2.2e-27 127.5 250 32.4
DCAR_023471 Daucus carota HOM05D005370 ORTHO05D006659 2.9e-27 127.1 251 37.1
PSO238G0055 Papaver somniferum HOM05D005370 ORTHO05D006659 2.9e-27 127.1 246 35.4
Ah.11g050020 Amaranthus hybridus HOM05D005370 ORTHO05D006659 4.9e-27 126.3 258 33.3
TWI18G0973 Tripterygium wilfordii HOM05D005370 ORTHO05D006659 6.4e-27 125.9 256 34.0
TAR362G0430 Trochodendron aralioides HOM05D005370 ORTHO05D006659 6.4e-27 125.9 256 35.9
AUR62032263 Chenopodium quinoa HOM05D005370 ORTHO05D006659 8.3e-27 125.6 258 34.9
Phvul.007G177000 Phaseolus vulgaris HOM05D005370 ORTHO05D006659 8.3e-27 125.6 252 36.1
FAN17G2982 Fragaria x ananassa HOM05D005370 ORTHO05D006659 1.4e-26 124.8 252 32.1
FAN22G1699 Fragaria x ananassa HOM05D005370 ORTHO05D006659 1.4e-26 124.8 252 32.1
MBI15_g19756_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 1.4e-26 124.8 249 35.3
Thecc.04G244800 Theobroma cacao HOM05D005370 ORTHO05D006659 1.8e-26 124.4 252 34.5
CSS0021022 Camellia sinensis var. sinensis HOM05D005370 ORTHO05D006659 2.4e-26 124.0 256 34.0
Cc01_g08030 Coffea canephora HOM05D005370 ORTHO05D006659 7.0e-26 122.5 246 33.3
MELO3C005475.2 Cucumis melo HOM05D005370 ORTHO05D006659 9.2e-26 122.1 259 34.4
EL10Ac5g10469 Beta vulgaris HOM05D005370 ORTHO05D006659 1.2e-25 121.7 258 35.3
CiPaw.02G117200 Carya illinoinensis HOM05D005370 ORTHO05D006659 1.6e-25 121.3 254 33.5
Ciclev10006717m.g Citrus clementina HOM05D005370 ORTHO05D006659 1.6e-25 121.3 255 33.3
Manes.01G202000 Manihot esculenta HOM05D005370 ORTHO05D006659 1.6e-25 121.3 258 34.9
ATR0665G285 Amborella trichopoda HOM05D005370 ORTHO05D006659 2.0e-25 120.9 261 32.6
CsaV3_5G004690 Cucumis sativus L. HOM05D005370 ORTHO05D006659 2.7e-25 120.6 259 34.0
Sopen04g034560 Solanum pennellii HOM05D005370 ORTHO05D006659 2.7e-25 120.6 258 34.1
SGA_v2.0_scaffold3169G54286 Striga asiatica HOM05D005370 ORTHO05D006659 2.7e-25 120.6 259 32.8
Aqoxy3G04193 Aquilegia oxysepala HOM05D005370 ORTHO05D006659 1.3e-24 118.2 255 32.9
DCAR_028371 Daucus carota HOM05D005370 ORTHO05D006659 1.3e-24 118.2 263 33.5
Dinv22486 Davidia involucrata HOM05D005370 ORTHO05D006659 1.3e-24 118.2 237 34.2
Solyc04g080950.3 Solanum lycopersicum HOM05D005370 ORTHO05D006659 1.3e-24 118.2 254 33.1
Glyma.10G031500 Glycine max HOM05D005370 ORTHO05D006659 1.7e-24 117.9 246 35.0
Cfa018256 Carpinus fangiana HOM05D005370 ORTHO05D006659 3.0e-24 117.1 273 33.0
QL06p015215 Quercus lobata HOM05D005370 ORTHO05D006659 3.0e-24 117.1 254 32.7
Migut.D00369 Erythranthe guttata HOM05D005370 ORTHO05D006659 3.9e-24 116.7 249 33.3
FAN12G2588 Fragaria x ananassa HOM05D005370 ORTHO05D006659 8.6e-24 115.5 239 31.4
TWI12G0023 Tripterygium wilfordii HOM05D005370 ORTHO05D006659 8.6e-24 115.5 256 33.6
Lj5g0014373 Lotus japonicus HOM05D005370 ORTHO05D006659 1.1e-23 115.2 252 34.1
HPP92_015262 Vanilla planifolia HOM05D005370 ORTHO05D006659 2.5e-23 114.0 256 32.0
arahy.Tifrunner.gnm1.ann1.T9F7M4 Arachis hypogaea HOM05D005370 ORTHO05D006659 3.3e-23 113.6 250 34.4
ECA236G0510 Erigeron canadensis HOM05D005370 ORTHO05D006659 3.3e-23 113.6 245 32.7
Lalb_Chr02g0142451 Lupinus albus HOM05D005370 ORTHO05D006659 3.3e-23 113.6 250 32.8
SGA_v2.0_scaffold580G53040 Striga asiatica HOM05D005370 ORTHO05D006659 3.3e-23 113.6 252 31.3
VMungo0720G0865 Vigna mungo HOM05D005370 ORTHO05D006659 3.3e-23 113.6 250 32.8
HanXRQChr02g0032381 Helianthus annuus HOM05D005370 ORTHO05D006659 4.3e-23 113.2 246 32.9
Peaxi162Scf00434g00622 Petunia axillaris HOM05D005370 ORTHO05D006659 9.5e-23 112.1 266 31.2
SalBow4G0733 Salvia bowleyana HOM05D005370 ORTHO05D006659 1.2e-22 111.7 253 32.4
Sc24g0004270 Simmondsia chinensis HOM05D005370 ORTHO05D006659 1.6e-22 111.3 242 32.2
CANSAT11G0223 Cannabis sativa HOM05D005370 ORTHO05D006659 3.6e-22 110.2 253 31.6
Ca_14753_v3 Cicer arietinum L. HOM05D005370 ORTHO05D006659 4.7e-22 109.8 252 32.5
Ca_24537_v3 Cicer arietinum L. HOM05D005370 ORTHO05D006659 4.7e-22 109.8 252 32.5
Lsat_1_v5_gn_8_94841 Lactuca sativa HOM05D005370 ORTHO05D006659 6.2e-22 109.4 248 32.7
Prupe.2G050700 Prunus persica HOM05D005370 ORTHO05D006659 1.0e-21 108.6 247 32.4
CANSAT11G2293 Cannabis sativa HOM05D005370 ORTHO05D006659 2.3e-21 107.5 253 32.0
Hund02875 Selenicereus undatus HOM05D005370 ORTHO05D006659 6.8e-21 105.9 242 31.4
PGSC0003DMG400003760 Solanum tuberosum HOM05D005370 ORTHO05D006659 2.6e-20 104.0 245 31.4
CAN.G851.23 Capsicum annuum HOM05D005370 ORTHO05D006659 4.4e-20 103.2 256 30.5
Actinidia27521 Actinidia chinensis HOM05D005370 ORTHO05D006659 1.7e-19 101.3 265 32.8
Medtr1g070900 Medicago truncatula HOM05D005370 ORTHO05D006659 4.9e-19 99.8 252 32.1
Haze_11274 Corylus avellana HOM05D005370 ORTHO05D006659 3.2e-18 97.1 235 30.6
MD04G1026200 Malus domestica HOM05D005370 ORTHO05D006659 7.0e-18 95.9 220 29.1
Sp2g08480 Schrenkiella parvula HOM05D005370 ORTHO05D006659 9.2e-18 95.5 247 30.4
arahy.Tifrunner.gnm1.ann1.XNPI4G Arachis hypogaea HOM05D005370 ORTHO05D006659 1.6e-17 94.7 254 32.3
ClCG01G004480 Citrullus lanatus HOM05D005370 ORTHO05D006659 2.7e-17 94.0 252 32.9
Oeu025788.2 Olea europaea HOM05D005370 ORTHO05D006659 2.7e-17 94.0 216 31.0
Cpa.g.sc58.39 Carica papaya HOM05D005370 ORTHO05D006659 3.5e-17 93.6 219 30.6
Nn1g02548 Nelumbo nucifera HOM05D005370 ORTHO05D000069 7.8e-17 92.4 215 30.7
Prupe.1G027700 Prunus persica HOM05D005370 ORTHO05D006659 1.0e-16 92.0 222 32.0
arahy.Tifrunner.gnm1.ann1.7J2YFM Arachis hypogaea HOM05D005370 ORTHO05D006659 2.3e-16 90.9 250 31.2
Thhalv10017901m.g Eutrema salsugineum HOM05D005370 ORTHO05D006659 2.3e-16 90.9 247 29.1
BraA06t27643Z Brassica rapa HOM05D005370 ORTHO05D006659 6.6e-16 89.4 245 30.2
CDE07G1268 Ceratophyllum demersum HOM05D005370 ORTHO05D006659 8.6e-16 89.0 252 29.4
Psat3g119240 Pisum sativum HOM05D005370 ORTHO05D006659 8.6e-16 89.0 250 30.4
CARHR179930 Cardamine hirsuta HOM05D005370 ORTHO05D006659 1.1e-15 88.6 247 29.6
BcaC06g31683 Brassica carinata HOM05D005370 ORTHO05D006659 1.5e-15 88.2 249 31.3
BcaC06g34636 Brassica carinata HOM05D005370 ORTHO05D006659 1.9e-15 87.8 249 31.3
C07p26250 Brassica napus HOM05D005370 ORTHO05D006659 1.9e-15 87.8 249 31.3
BolC7t43153H Brassica oleracea HOM05D005370 ORTHO05D006659 1.9e-15 87.8 249 31.3
A06p47750 Brassica napus HOM05D005370 ORTHO05D006659 4.3e-15 86.7 245 30.2
AL8G16570 Arabidopsis lyrata HOM05D005370 ORTHO05D006659 5.6e-15 86.3 245 28.2
Eucgr.G02606 Eucalyptus grandis HOM05D005370 ORTHO05D006659 2.8e-14 84.0 219 31.1
AT5G43680 Arabidopsis thaliana HOM05D005370 ORTHO05D006659 8.1e-14 82.4 245 27.3
Carub.0008s0497 Capsella rubella HOM05D005370 ORTHO05D006659 1.8e-13 81.3 245 27.8
Actinidia19979 Actinidia chinensis HOM05D005370 ORTHO05D006659 3.1e-13 80.5 113 42.5
CBR_g32014 Chara braunii HOM05D005370 ORTHO05D006659 1.5e-12 78.2 249 29.3
Nitab4.5_0001423g0070 Nicotiana tabacum HOM05D005370 ORTHO05D006659 4.4e-12 76.6 299 25.8
Aa31LG5G3560 Aethionema arabicum HOM05D005370 ORTHO05D006659 9.8e-12 75.5 241 28.2
Os11g0551350 Oryza sativa ssp. japonica HOM05D005370 ORTHO05D006659 9.8e-12 75.5 44 88.6
TPR.G39035 Trifolium pratense HOM05D005370 ORTHO05D000069 2.2e-11 74.3 73 47.9
Haze_21184 Corylus avellana HOM05D005370 ORTHO05D006659 4.9e-11 73.2 271 29.2
Sopen01g042090 Solanum pennellii HOM05D005370 ORTHO05D006659 4.9e-11 73.2 209 28.7
Pp3c17_23420 Physcomitrium patens HOM05D005370 ORTHO05D006659 6.4e-11 72.8 248 26.2
Psat1g083920 Pisum sativum HOM05D005370 ORTHO05D006659 1.4e-10 71.6 212 28.3
Psat0s8363g0040 Pisum sativum HOM05D005370 ORTHO05D006659 1.9e-10 71.2 212 28.3
Mapoly0029s0143 Marchantia polymorpha HOM05D005370 ORTHO05D006659 3.2e-10 70.5 243 27.2
MSTRG.18281 Avicennia marina HOM05D005370 ORTHO05D006659 5.4e-10 69.7 66 48.5
SGA_v2.0_scaffold1G00551 Striga asiatica HOM05D006471 ORTHO05D008157 1.6e-09 68.2 66 45.5
Cc01_g05520 Coffea canephora HOM05D005370 ORTHO05D006659 2.7e-09 67.4 123 37.4
SGA_v2.0_scaffold138G35287 Striga asiatica HOM05D005370 ORTHO05D006659 4.6e-09 66.6 66 43.9
Nitab4.5_0002156g0030 Nicotiana tabacum HOM05D005370 ORTHO05D006659 7.8e-09 65.9 66 45.5
Nitab4.5_0001840g0120 Nicotiana tabacum HOM05D005370 ORTHO05D006659 1.3e-08 65.1 66 45.5
Nitab4.5_0001903g0040 Nicotiana tabacum HOM05D005370 ORTHO05D006659 1.3e-08 65.1 66 43.9
Glyma.02G142900 Glycine max HOM05D005370 ORTHO05D006659 2.3e-08 64.3 71 42.3
Psat5g092160 Pisum sativum HOM05D009633 ORTHO05D011907 2.3e-08 64.3 71 42.3
MBI11_g15920_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 3.0e-08 63.9 176 30.7
Nn8g40523 Nelumbo nucifera HOM05D005370 ORTHO05D006659 1.9e-07 61.2 65 44.6
PGSC0003DMG400017885 Solanum tuberosum HOM05D005370 ORTHO05D006659 2.5e-07 60.8 66 40.9
CDE03G0266 Ceratophyllum demersum HOM05D005370 ORTHO05D006659 2.1e-06 57.8 214 26.2
AagrBONN_evm.TU.Sc2ySwM_228.5248 Anthoceros agrestis HOM05D005370 ORTHO05D006659 8.1e-06 55.8 72 38.9
Psat1g084080 Pisum sativum HOM05D005370 ORTHO05D006659 8.1e-06 55.8 119 34.5


User provided reference genes

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