Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0539000 Oryza sativa ssp. japonica HOM05D021840 ORTHO05D298518 0.0e+00 1185.6 618 100.0
Os11g0538400 Oryza sativa ssp. japonica HOM05D021840 ORTHO05D294522 2.9e-130 469.9 629 50.6
Os11g0642100 Oryza sativa ssp. japonica HOM05D021840 ORTHO05D294477 5.7e-49 199.9 391 41.7
Os08g0328600 Oryza sativa ssp. japonica HOM05D021840 ORTHO05D296276 5.5e-36 156.8 621 29.1
Os08g0330900 Oryza sativa ssp. japonica HOM05D021840 ORTHO05D293764 5.0e-13 80.5 260 29.6
Lj1g0006189 Lotus japonicus HOM05D000051 ORTHO05D000015 1.7e-08 65.5 58 56.9
Os04g0208500 Oryza sativa ssp. japonica HOM05D000312 ORTHO05D000221 3.2e-07 61.2 57 52.6
Os06g0556300 Oryza sativa ssp. japonica HOM05D000051 ORTHO05D000015 3.2e-07 61.2 57 49.1
Os02g0178200 Oryza sativa ssp. japonica HOM05D000312 ORTHO05D000221 3.5e-06 57.8 130 37.7
Cc10_g09940 Coffea canephora HOM05D000051 ORTHO05D000015 4.6e-06 57.4 58 50.0
arahy.Tifrunner.gnm1.ann1.8IRE12 Arachis hypogaea HOM05D000051 ORTHO05D000015 6.0e-06 57.0 48 50.0
Carub.0004s0321 Capsella rubella HOM05D002909 ORTHO05D000493 6.0e-06 57.0 53 49.1
Os04g0208600 Oryza sativa ssp. japonica HOM05D000312 ORTHO05D000221 6.0e-06 57.0 48 56.2
arahy.Tifrunner.gnm1.ann1.4LPH3Z Arachis hypogaea HOM05D000051 ORTHO05D000015 7.8e-06 56.6 48 50.0


User provided reference genes

Program Settings