Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0538400 Oryza sativa ssp. japonica HOM05D021840 ORTHO05D294522 0.0e+00 1288.1 654 100.0
Os11g0539000 Oryza sativa ssp. japonica HOM05D021840 ORTHO05D298518 1.5e-132 477.6 629 50.6
Os11g0642100 Oryza sativa ssp. japonica HOM05D021840 ORTHO05D294477 3.0e-56 224.2 375 44.0
Os08g0328600 Oryza sativa ssp. japonica HOM05D021840 ORTHO05D296276 5.5e-34 150.2 580 28.8
Os08g0330900 Oryza sativa ssp. japonica HOM05D021840 ORTHO05D293764 1.4e-13 82.4 235 31.5
QL05p062700 Quercus lobata HOM05D000051 ORTHO05D000015 2.4e-13 81.6 352 26.1
Thecc.07G045800 Theobroma cacao HOM05D000051 ORTHO05D000015 2.9e-11 74.7 404 26.2
Nn1g07075 Nelumbo nucifera HOM05D000051 ORTHO05D000015 1.6e-09 68.9 409 23.2
PSO210G0477 Papaver somniferum HOM05D000051 ORTHO05D000015 6.7e-08 63.5 429 22.6
Os07g0503300 Oryza sativa ssp. japonica HOM05D000100 ORTHO05D000052 1.5e-07 62.4 44 72.7
PSO173G0112 Papaver somniferum HOM05D000051 ORTHO05D000015 2.0e-07 62.0 436 22.9
TWI53G0503 Tripterygium wilfordii HOM05D000051 ORTHO05D000015 2.0e-07 62.0 421 24.5
QL08p020672 Quercus lobata HOM05D000051 ORTHO05D000015 2.6e-07 61.6 366 25.1
SGA_v2.0_scaffold147G36349 Striga asiatica HOM05D005918 ORTHO05D008619 2.6e-07 61.6 464 23.3
Eucgr.L03287 Eucalyptus grandis HOM05D003087 ORTHO05D003312 3.3e-07 61.2 416 24.8
Os11g0208000 Oryza sativa ssp. japonica HOM05D000051 ORTHO05D000015 3.3e-07 61.2 79 43.0
QL08p020709 Quercus lobata HOM05D000051 ORTHO05D000015 7.4e-07 60.1 363 24.8
Zm00001eb207690 Zea mays HOM05D014114 ORTHO05D003593 7.4e-07 60.1 434 26.0
Eucgr.F00967 Eucalyptus grandis HOM05D003087 ORTHO05D003312 1.3e-06 59.3 425 24.7
HanXRQChr17g0537071 Helianthus annuus HOM05D001243 ORTHO05D000843 2.2e-06 58.5 333 25.2
Thecc.10G178300 Theobroma cacao HOM05D000051 ORTHO05D000843 2.8e-06 58.2 369 23.3
Carub.0008s1389 Capsella rubella HOM05D000051 ORTHO05D000015 3.7e-06 57.8 81 39.5
Thecc.10G178600 Theobroma cacao HOM05D000051 ORTHO05D000843 3.7e-06 57.8 369 23.3
HanXRQChr17g0536671 Helianthus annuus HOM05D001243 ORTHO05D000843 4.8e-06 57.4 311 25.7
arahy.Tifrunner.gnm1.ann1.SIBV1X Arachis hypogaea HOM05D000051 ORTHO05D000015 8.2e-06 56.6 73 42.5
COL.COLO4_05213 Corchorus olitorius HOM05D021840 ORTHO05D013024 8.2e-06 56.6 39 59.0
Eucgr.F00966 Eucalyptus grandis HOM05D003087 ORTHO05D003312 8.2e-06 56.6 311 26.0
Hma1.2p1_2457F.1_g322490 Hydrangea macrophylla HOM05D000051 ORTHO05D000015 8.2e-06 56.6 410 22.4


User provided reference genes

Program Settings