Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0528200 Oryza sativa ssp. japonica HOM05D005483 ORTHO05D006924 8.6e-188 660.2 344 100.0
TAR622G1101 Trochodendron aralioides HOM05D005483 ORTHO05D006924 7.6e-136 487.6 353 68.0
HPP92_020112 Vanilla planifolia HOM05D005483 ORTHO05D006924 1.3e-132 476.9 344 69.5
Nn3g16247 Nelumbo nucifera HOM05D005483 ORTHO05D006924 2.5e-131 472.6 350 66.9
Thecc.02G190700 Theobroma cacao HOM05D005483 ORTHO05D006924 1.3e-130 470.3 354 65.8
GSVIVG01001111001 Vitis vinifera HOM05D005483 ORTHO05D006924 6.2e-130 468.0 353 67.7
Duzib052G0599 Durio zibethinus HOM05D005483 ORTHO05D006924 2.6e-128 462.6 354 65.5
Nn4g22102 Nelumbo nucifera HOM05D005483 ORTHO05D006924 2.6e-128 462.6 350 65.1
Peaxi162Scf00842g00430 Petunia axillaris HOM05D005483 ORTHO05D006924 1.0e-127 460.7 356 65.4
Gohir.A01G020200 Gossypium hirsutum HOM05D005483 ORTHO05D006924 1.7e-127 459.9 354 63.8
CANSAT01G1825 Cannabis sativa HOM05D005483 ORTHO05D006924 2.2e-127 459.5 355 65.1
CSS0020507 Camellia sinensis var. sinensis HOM05D005483 ORTHO05D006924 6.5e-127 458.0 350 65.4
QL03p048748 Quercus lobata HOM05D005483 ORTHO05D006924 6.5e-127 458.0 353 65.2
TWI18G1022 Tripterygium wilfordii HOM05D005483 ORTHO05D006924 6.5e-127 458.0 354 65.3
Gohir.D01G018800 Gossypium hirsutum HOM05D005483 ORTHO05D006924 1.4e-126 456.8 354 63.8
Gorai.002G021000 Gossypium raimondii HOM05D005483 ORTHO05D006924 1.4e-126 456.8 354 63.8
Dinv17529 Davidia involucrata HOM05D005483 ORTHO05D006924 1.9e-126 456.4 354 65.3
Actinidia30577 Actinidia chinensis HOM05D005483 ORTHO05D006924 3.2e-126 455.7 353 63.7
DCAR_026441 Daucus carota HOM05D005483 ORTHO05D006924 3.2e-126 455.7 354 64.7
Ciclev10004203m.g Citrus clementina HOM05D005483 ORTHO05D006924 4.2e-126 455.3 355 63.4
PSO478G1749 Papaver somniferum HOM05D005483 ORTHO05D006924 5.5e-126 454.9 355 63.9
PSO017G1761 Papaver somniferum HOM05D005483 ORTHO05D006924 7.1e-126 454.5 355 63.9
Cfa009459 Carpinus fangiana HOM05D005483 ORTHO05D006924 1.6e-125 453.4 354 65.5
Migut.K01044 Erythranthe guttata HOM05D005483 ORTHO05D006924 2.7e-125 452.6 356 64.0
Haze_12514 Corylus avellana HOM05D005483 ORTHO05D006924 6.0e-125 451.4 354 64.7
Hma1.2p1_1494F.1_g286890 Hydrangea macrophylla HOM05D005483 ORTHO05D006924 7.9e-125 451.1 354 62.7
Manes.08G100200 Manihot esculenta HOM05D005483 ORTHO05D006924 7.9e-125 451.1 354 63.3
Potri.001G068900 Populus trichocarpa HOM05D005483 ORTHO05D006924 7.9e-125 451.1 353 63.7
Eucgr.G01983 Eucalyptus grandis HOM05D005483 ORTHO05D006924 1.0e-124 450.7 355 65.1
MBI11_g02503_MAGBIO Magnolia biondii HOM05D005483 ORTHO05D006924 1.3e-124 450.3 317 70.0
ATR0582G070 Amborella trichopoda HOM05D005483 ORTHO05D006924 3.9e-124 448.7 348 67.0
CiPaw.06G110300 Carya illinoinensis HOM05D005483 ORTHO05D006924 3.9e-124 448.7 354 64.1
Aqoxy5G03055 Aquilegia oxysepala HOM05D005483 ORTHO05D006924 6.7e-124 448.0 353 64.3
Potri.003G161400 Populus trichocarpa HOM05D005483 ORTHO05D006924 6.7e-124 448.0 353 62.0
TAR374G0614 Trochodendron aralioides HOM05D005483 ORTHO05D006924 6.7e-124 448.0 347 62.8
Duzib248G1306 Durio zibethinus HOM05D005483 ORTHO05D006924 8.7e-124 447.6 354 64.1
Solyc11g033282.1 Solanum lycopersicum HOM05D005483 ORTHO05D006924 8.7e-124 447.6 355 63.1
EL10Ac2g02397 Beta vulgaris HOM05D005483 ORTHO05D006924 1.1e-123 447.2 351 64.4
MD16G1142500 Malus domestica HOM05D005483 ORTHO05D006924 1.1e-123 447.2 354 63.0
AUR62028835 Chenopodium quinoa HOM05D005483 ORTHO05D006924 3.3e-123 445.7 351 65.5
Lj6C839G6 Lonicera japonica HOM05D005483 ORTHO05D006924 3.3e-123 445.7 359 62.7
RcHm_v2.0_Chr4g0428701 Rosa chinensis HOM05D005483 ORTHO05D006924 4.3e-123 445.3 354 62.4
Sopen11g017110 Solanum pennellii HOM05D005483 ORTHO05D006924 4.3e-123 445.3 355 62.8
TWI36G1286 Tripterygium wilfordii HOM05D005483 ORTHO05D006924 4.3e-123 445.3 354 64.1
FvH4_4g22440 Fragaria vesca HOM05D005483 ORTHO05D006924 7.4e-123 444.5 354 61.9
Sabra03G0117300 Salix brachista HOM05D005483 ORTHO05D006924 7.4e-123 444.5 353 62.3
MSTRG.8060 Avicennia marina HOM05D005483 ORTHO05D006924 9.6e-123 444.1 353 63.7
FAN07G1779 Fragaria x ananassa HOM05D005483 ORTHO05D006924 9.6e-123 444.1 354 61.9
SalBow2G2141 Salvia bowleyana HOM05D005483 ORTHO05D006924 2.1e-122 443.0 355 62.5
Lsat_1_v5_gn_3_32540 Lactuca sativa HOM05D005483 ORTHO05D006924 2.8e-122 442.6 354 62.4
Sabra01G0048200 Salix brachista HOM05D005483 ORTHO05D006924 2.8e-122 442.6 351 63.0
FAN12G1583 Fragaria x ananassa HOM05D005483 ORTHO05D006924 3.7e-122 442.2 354 61.6
MSTRG.445 Avicennia marina HOM05D005483 ORTHO05D006924 4.8e-122 441.8 355 63.1
Cc11_g14910 Coffea canephora HOM05D005483 ORTHO05D006924 4.8e-122 441.8 355 63.4
Prupe.1G213300 Prunus persica HOM05D005483 ORTHO05D006924 6.2e-122 441.4 354 63.0
Cpa.g.sc38.68 Carica papaya HOM05D005483 ORTHO05D006924 1.1e-121 440.7 354 61.3
FAN17G2071 Fragaria x ananassa HOM05D005483 ORTHO05D006924 1.4e-121 440.3 354 61.3
Sc11g0000050 Simmondsia chinensis HOM05D005483 ORTHO05D006924 1.4e-121 440.3 351 63.0
PGR119G2201 Punica granatum HOM05D005483 ORTHO05D006924 2.4e-121 439.5 356 62.1
AUR62005722 Chenopodium quinoa HOM05D005483 ORTHO05D006924 3.1e-121 439.1 351 64.4
MELO3C017824.2 Cucumis melo HOM05D005483 ORTHO05D006924 4.1e-121 438.7 353 64.0
HanXRQChr17g0540341 Helianthus annuus HOM05D005483 ORTHO05D006924 6.9e-121 438.0 357 61.9
HanXRQChr06g0175451 Helianthus annuus HOM05D005483 ORTHO05D006924 9.0e-121 437.6 357 62.5
SEGI_17725 Sequoiadendron giganteum HOM05D005483 ORTHO05D006924 2.0e-120 436.4 344 64.5
ECA246G4063 Erigeron canadensis HOM05D005483 ORTHO05D006924 3.4e-120 435.6 352 62.8
Sed0020947 Sechium edule HOM05D005483 ORTHO05D006924 5.8e-120 434.9 354 63.3
vmacro01010 Vaccinium macrocarpon HOM05D005483 ORTHO05D006924 7.6e-120 434.5 354 61.0
CsaV3_4G002140 Cucumis sativus L. HOM05D005483 ORTHO05D006924 1.0e-119 434.1 353 62.9
Rhsim12G0016200 Rhododendron simsii HOM05D005483 ORTHO05D006924 1.7e-119 433.3 354 59.9
Sed0017746 Sechium edule HOM05D005483 ORTHO05D006924 2.9e-119 432.6 354 63.0
Phvul.008G003900 Phaseolus vulgaris HOM05D005483 ORTHO05D006924 6.5e-119 431.4 354 61.0
SGA_v2.0_scaffold258G45771 Striga asiatica HOM05D005483 ORTHO05D006924 8.4e-119 431.0 352 62.2
arahy.Tifrunner.gnm1.ann1.H63XD7 Arachis hypogaea HOM05D005483 ORTHO05D006924 1.4e-118 430.3 354 61.0
arahy.Tifrunner.gnm1.ann1.N4LA1V Arachis hypogaea HOM05D005483 ORTHO05D006924 1.4e-118 430.3 354 61.0
Glyma.18G298700 Glycine max HOM05D005483 ORTHO05D006924 1.4e-118 430.3 354 59.9
Glyma.08G363300 Glycine max HOM05D005483 ORTHO05D006924 1.9e-118 429.9 354 60.2
Lj1g0002578 Lotus japonicus HOM05D005483 ORTHO05D006924 2.5e-118 429.5 353 61.8
MD13G1132200 Malus domestica HOM05D005483 ORTHO05D006924 2.5e-118 429.5 340 62.9
Ca_04087_v3 Cicer arietinum L. HOM05D005483 ORTHO05D006924 9.3e-118 427.6 354 60.5
TPR.G9702 Trifolium pratense HOM05D005483 ORTHO05D006924 2.1e-117 426.4 354 60.2
Lalb_Chr10g0091131 Lupinus albus HOM05D005483 ORTHO05D006924 5.1e-116 421.8 355 60.8
Medtr7g006760 Medicago truncatula HOM05D005483 ORTHO05D006924 5.1e-116 421.8 354 59.9
Medtr7g406760 Medicago truncatula HOM05D005483 ORTHO05D006924 5.1e-116 421.8 354 59.9
Psat3g206760 Pisum sativum HOM05D005483 ORTHO05D006924 5.1e-116 421.8 356 59.8
Ah.03g135500 Amaranthus hybridus HOM05D005483 ORTHO05D006924 2.2e-114 416.4 319 65.5
ClCG07G012020 Citrullus lanatus HOM05D005483 ORTHO05D006924 1.9e-110 403.3 323 64.4
BolC9t59209H Brassica oleracea HOM05D005483 ORTHO05D006924 9.4e-110 401.0 357 57.4
C09p63680 Brassica napus HOM05D005483 ORTHO05D006924 1.6e-109 400.2 357 57.4
AT5G13390 Arabidopsis thaliana HOM05D005483 ORTHO05D006924 2.7e-109 399.4 357 57.1
A10p24830 Brassica napus HOM05D005483 ORTHO05D006924 2.7e-109 399.4 357 57.4
BraA10t44547Z Brassica rapa HOM05D005483 ORTHO05D006924 2.7e-109 399.4 357 57.4
AL6G24010 Arabidopsis lyrata HOM05D005483 ORTHO05D006924 3.6e-109 399.1 357 57.1
Carub.0006s1155 Capsella rubella HOM05D005483 ORTHO05D006924 4.6e-109 398.7 359 56.5
BcaNung01159 Brassica carinata HOM05D005483 ORTHO05D006924 1.8e-108 396.7 358 57.0
A02p01880 Brassica napus HOM05D005483 ORTHO05D006924 1.8e-108 396.7 356 57.0
CARHR200040 Cardamine hirsuta HOM05D005483 ORTHO05D006924 2.3e-108 396.4 355 57.7
Sp6g30630 Schrenkiella parvula HOM05D005483 ORTHO05D006924 3.0e-108 396.0 357 56.9
BraA02t05161Z Brassica rapa HOM05D005483 ORTHO05D006924 3.9e-108 395.6 356 57.0
THA.LOC104825454 Tarenaya hassleriana HOM05D005483 ORTHO05D006924 1.1e-107 394.0 355 56.9
BcaNung01880 Brassica carinata HOM05D005483 ORTHO05D006924 1.5e-107 393.7 356 56.7
Aa31LG3G14260 Aethionema arabicum HOM05D005483 ORTHO05D006924 2.0e-107 393.3 359 56.0
C02p06100 Brassica napus HOM05D005483 ORTHO05D006924 5.7e-107 391.7 356 56.2
BolC2t06551H Brassica oleracea HOM05D005483 ORTHO05D006924 5.7e-107 391.7 356 56.2
Thhalv10012499m.g Eutrema salsugineum HOM05D005483 ORTHO05D006924 1.3e-106 390.6 359 56.0
Mapoly0029s0137 Marchantia polymorpha HOM05D005483 ORTHO05D006924 5.3e-105 385.2 348 57.8
unitig_22.g6373 Utricularia gibba HOM05D005483 ORTHO05D006924 4.2e-102 375.6 315 60.6
Pp3c14_23090 Physcomitrium patens HOM05D005483 ORTHO05D006924 2.7e-101 372.9 346 56.6
VMungo1383G1684 Vigna mungo HOM05D005483 ORTHO05D006924 2.7e-101 372.9 296 63.5
AagrBONN_evm.TU.Sc2ySwM_228.3500 Anthoceros agrestis HOM05D005483 ORTHO05D006924 7.4e-99 364.8 348 53.7
BcaC04g19119 Brassica carinata HOM05D005483 ORTHO05D006924 2.9e-95 352.8 356 53.1
SMO116G0229 Selaginella moellendorffii HOM05D005483 ORTHO05D006924 2.2e-90 336.7 347 51.0
COL.COLO4_08434 Corchorus olitorius HOM05D005483 ORTHO05D006924 4.9e-74 282.3 229 64.6
Actinidia22109 Actinidia chinensis HOM05D005483 ORTHO05D006924 1.1e-73 281.2 289 54.3
CBR_g38877 Chara braunii HOM05D005483 ORTHO05D006924 2.4e-73 280.0 363 46.0
SEGI_02355 Sequoiadendron giganteum HOM05D005483 ORTHO05D006924 1.9e-62 243.8 227 58.6
CDE05G1761 Ceratophyllum demersum HOM05D005483 ORTHO05D006924 4.7e-45 186.0 157 63.1
CDE05G0204 Ceratophyllum demersum HOM05D005483 ORTHO05D006924 6.8e-44 182.2 158 60.8
Pp3c1_41760 Physcomitrium patens HOM05D005483 ORTHO05D006924 1.6e-32 144.4 180 46.7
Cre01.g018050 Chlamydomonas reinhardtii HOM05D005483 ORTHO05D006924 4.8e-21 106.3 370 27.6
DCAR_029048 Daucus carota HOM05D005483 ORTHO05D006924 1.4e-20 104.8 110 54.5
MCO16G196 Micromonas commoda HOM05D005483 ORTHO05D006924 1.8e-20 104.4 357 28.0


User provided reference genes

Program Settings