Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0506700 Oryza sativa ssp. japonica HOM05D000435 ORTHO05D293803 2.5e-57 225.3 123 100.0
Zm00001eb201110 Zea mays HOM05D000435 ORTHO05D000430 3.2e-12 75.5 56 69.6
Zm00001eb091420 Zea mays HOM05D000435 ORTHO05D000430 7.2e-12 74.3 56 71.4
Eucgr.F02609 Eucalyptus grandis HOM05D000435 ORTHO05D000430 6.7e-10 67.8 56 62.5
Lalb_Chr21g0305731 Lupinus albus HOM05D000435 ORTHO05D000430 6.7e-10 67.8 56 58.9
arahy.Tifrunner.gnm1.ann1.E55NPH Arachis hypogaea HOM05D000435 ORTHO05D000430 1.1e-09 67.0 56 58.9
arahy.Tifrunner.gnm1.ann1.QC0SSE Arachis hypogaea HOM05D000435 ORTHO05D000430 1.1e-09 67.0 56 58.9
Glyma.10G217300 Glycine max HOM05D000435 ORTHO05D000430 1.5e-09 66.6 56 58.9
Ca_10621_v3 Cicer arietinum L. HOM05D000435 ORTHO05D000430 2.0e-09 66.2 56 57.1
Migut.C01258 Erythranthe guttata HOM05D000435 ORTHO05D000430 2.6e-09 65.9 54 61.1
Lalb_Chr02g0141771 Lupinus albus HOM05D000435 ORTHO05D000430 3.3e-09 65.5 56 57.1
ClCG09G010070 Citrullus lanatus HOM05D000435 ORTHO05D000430 7.4e-09 64.3 56 55.4
Lj5g0003519 Lotus japonicus HOM05D000435 ORTHO05D000430 7.4e-09 64.3 56 58.9
Phvul.007G088800 Phaseolus vulgaris HOM05D000435 ORTHO05D000430 7.4e-09 64.3 56 57.1
SalBow7G3600 Salvia bowleyana HOM05D000435 ORTHO05D000430 7.4e-09 64.3 56 58.9
MELO3C024080.2 Cucumis melo HOM05D000435 ORTHO05D000430 9.7e-09 63.9 56 55.4
CsaV3_7G024720 Cucumis sativus L. HOM05D000435 ORTHO05D000430 9.7e-09 63.9 56 55.4
QL02p033557 Quercus lobata HOM05D000435 ORTHO05D000430 9.7e-09 63.9 54 57.4
PGR042G3441 Punica granatum HOM05D000435 ORTHO05D000430 1.3e-08 63.5 56 55.4
Glyma.20G174800 Glycine max HOM05D000435 ORTHO05D000430 1.7e-08 63.2 56 57.1
Aa31LG4G8660 Aethionema arabicum HOM05D000435 ORTHO05D000430 2.2e-08 62.8 54 57.4
Cfa013845 Carpinus fangiana HOM05D003652 ORTHO05D004190 2.2e-08 62.8 54 55.6
Haze_22518 Corylus avellana HOM05D000435 ORTHO05D000430 2.2e-08 62.8 54 55.6
MD05G1042200 Malus domestica HOM05D000435 ORTHO05D000430 2.8e-08 62.4 56 57.1
Manes.18G101300 Manihot esculenta HOM05D000435 ORTHO05D000430 2.8e-08 62.4 56 55.4
HanXRQChr11g0326211 Helianthus annuus HOM05D000435 ORTHO05D000430 3.7e-08 62.0 56 53.6
Prupe.8G058800 Prunus persica HOM05D000435 ORTHO05D000430 3.7e-08 62.0 56 55.4
CiPaw.07G160200 Carya illinoinensis HOM05D000435 ORTHO05D000430 4.8e-08 61.6 54 53.7
Cc10_g10680 Coffea canephora HOM05D000435 ORTHO05D000430 4.8e-08 61.6 54 53.7
Dinv15083 Davidia involucrata HOM05D000435 ORTHO05D000430 4.8e-08 61.6 56 53.6
Medtr1g096580 Medicago truncatula HOM05D000435 ORTHO05D000430 4.8e-08 61.6 56 53.6
Nitab4.5_0000277g0030 Nicotiana tabacum HOM05D000435 ORTHO05D000430 4.8e-08 61.6 59 50.8
Psat6g187000 Pisum sativum HOM05D000435 ORTHO05D000430 4.8e-08 61.6 56 55.4
Potri.013G111900 Populus trichocarpa HOM05D000435 ORTHO05D000430 4.8e-08 61.6 54 55.6
Sabra13G0095200 Salix brachista HOM05D000435 ORTHO05D000430 4.8e-08 61.6 54 55.6
MSTRG.1525 Avicennia marina HOM05D000435 ORTHO05D000430 6.3e-08 61.2 54 57.4
MD10G1048700 Malus domestica HOM05D000435 ORTHO05D000430 6.3e-08 61.2 56 55.4
Potri.019G083000 Populus trichocarpa HOM05D000435 ORTHO05D000430 6.3e-08 61.2 54 55.6
VMungo0720G2939 Vigna mungo HOM05D000435 ORTHO05D000430 6.3e-08 61.2 56 55.4
Peaxi162Scf00083g00033 Petunia axillaris HOM05D000435 ORTHO05D000430 8.2e-08 60.8 56 53.6
Hund16796 Selenicereus undatus HOM05D000435 ORTHO05D000430 8.2e-08 60.8 56 51.8
Sc01g0001800 Simmondsia chinensis HOM05D000435 ORTHO05D000430 8.2e-08 60.8 56 51.8
TPR.G40811 Trifolium pratense HOM05D000435 ORTHO05D000430 8.2e-08 60.8 56 51.8
BcaB03g14917 Brassica carinata HOM05D000435 ORTHO05D000430 1.1e-07 60.5 54 57.4
BcaB05g24696 Brassica carinata HOM05D000435 ORTHO05D000430 1.1e-07 60.5 54 59.3
COL.COLO4_32966 Corchorus olitorius HOM05D000435 ORTHO05D000430 1.1e-07 60.5 54 53.7
Nitab4.5_0001258g0030 Nicotiana tabacum HOM05D000435 ORTHO05D000430 1.1e-07 60.5 56 51.8
THA.LOC104800115 Tarenaya hassleriana HOM05D000435 ORTHO05D000430 1.1e-07 60.5 54 53.7
Atru.chr13.1747 Acer truncatum HOM05D000435 ORTHO05D000430 1.4e-07 60.1 56 50.0
AL2G31570 Arabidopsis lyrata HOM05D000435 ORTHO05D000430 1.4e-07 60.1 54 57.4
AT1G71960 Arabidopsis thaliana HOM05D000435 ORTHO05D000430 1.4e-07 60.1 54 57.4
CSS0014210 Camellia sinensis var. sinensis HOM05D000435 ORTHO05D000430 1.4e-07 60.1 56 51.8
Carub.0002s1874 Capsella rubella HOM05D000435 ORTHO05D000430 1.4e-07 60.1 54 57.4
Nn5g27682 Nelumbo nucifera HOM05D000435 ORTHO05D000430 1.4e-07 60.1 56 51.8
Oeu038196.1 Olea europaea HOM05D000435 ORTHO05D000430 1.4e-07 60.1 54 51.9
Solyc11g018690.2 Solanum lycopersicum HOM05D000435 ORTHO05D000430 1.4e-07 60.1 56 51.8
Sopen11g009680 Solanum pennellii HOM05D000435 ORTHO05D000430 1.4e-07 60.1 56 51.8
PGSC0003DMG400000879 Solanum tuberosum HOM05D000435 ORTHO05D000430 1.4e-07 60.1 56 51.8
A07p30480 Brassica napus HOM05D000435 ORTHO05D000430 1.8e-07 59.7 54 57.4
BraA07t30684Z Brassica rapa HOM05D000435 ORTHO05D000430 1.8e-07 59.7 54 57.4
Cpa.g.sc66.35 Carica papaya HOM05D000435 ORTHO05D000430 1.8e-07 59.7 54 53.7
CDE06G2824 Ceratophyllum demersum HOM05D000435 ORTHO05D000430 1.8e-07 59.7 56 51.8
Ciclev10003388m.g Citrus clementina HOM05D000435 ORTHO05D000430 1.8e-07 59.7 54 51.9
Gohir.D05G277300 Gossypium hirsutum HOM05D000435 ORTHO05D000430 1.8e-07 59.7 54 51.9
Gorai.009G290300 Gossypium raimondii HOM05D000435 ORTHO05D000430 1.8e-07 59.7 54 51.9
Sed0002414 Sechium edule HOM05D000435 ORTHO05D000430 1.8e-07 59.7 56 50.0
BcaC03g15316 Brassica carinata HOM05D000435 ORTHO05D000430 2.4e-07 59.3 54 57.4
BcaC08g46637 Brassica carinata HOM05D000435 ORTHO05D000430 2.4e-07 59.3 54 57.4
A02p17600 Brassica napus HOM05D000435 ORTHO05D000430 2.4e-07 59.3 54 57.4
A07p38130 Brassica napus HOM05D000435 ORTHO05D000430 2.4e-07 59.3 54 57.4
C02p29250 Brassica napus HOM05D000435 ORTHO05D000430 2.4e-07 59.3 54 57.4
C06p46050 Brassica napus HOM05D000435 ORTHO05D000430 2.4e-07 59.3 54 57.4
BolC2t08975H Brassica oleracea HOM05D000435 ORTHO05D000430 2.4e-07 59.3 54 57.4
BolC6t39658H Brassica oleracea HOM05D000435 ORTHO05D000430 2.4e-07 59.3 54 57.4
BraA02t06806Z Brassica rapa HOM05D000435 ORTHO05D000430 2.4e-07 59.3 54 57.4
BraA07t31378Z Brassica rapa HOM05D000435 ORTHO05D000430 2.4e-07 59.3 54 57.4
CANSAT25G1863 Cannabis sativa HOM05D000435 ORTHO05D000430 2.4e-07 59.3 56 51.8
CAN.G356.2 Capsicum annuum HOM05D000435 ORTHO05D000430 2.4e-07 59.3 57 52.6
HanXRQChr09g0260331 Helianthus annuus HOM05D000435 ORTHO05D000430 2.4e-07 59.3 56 51.8
Lsat_1_v5_gn_4_134601 Lactuca sativa HOM05D000435 ORTHO05D000430 2.4e-07 59.3 56 51.8
Hund27089 Selenicereus undatus HOM05D000435 ORTHO05D000430 2.4e-07 59.3 56 51.8
THA.LOC104810557 Tarenaya hassleriana HOM05D000435 ORTHO05D000430 2.4e-07 59.3 53 54.7
Duzib116G0251 Durio zibethinus HOM05D000435 ORTHO05D000430 3.1e-07 58.9 54 51.9
Thhalv10018591m.g Eutrema salsugineum HOM05D000435 ORTHO05D000430 3.1e-07 58.9 54 55.6
Gohir.D09G113400 Gossypium hirsutum HOM05D000435 ORTHO05D000430 3.1e-07 58.9 54 51.9
Gorai.006G130900 Gossypium raimondii HOM05D000435 ORTHO05D000430 3.1e-07 58.9 54 51.9
Lsat_1_v5_gn_7_69241 Lactuca sativa HOM05D000435 ORTHO05D000430 3.1e-07 58.9 56 51.8
GSVIVG01034463001 Vitis vinifera HOM05D000435 ORTHO05D000430 3.1e-07 58.9 56 48.2
Duzib211G0545 Durio zibethinus HOM05D000435 ORTHO05D000430 4.1e-07 58.5 54 51.9
ECA232G2561 Erigeron canadensis HOM05D000435 ORTHO05D000430 4.1e-07 58.5 56 51.8
Thecc.08G184200 Theobroma cacao HOM05D000435 ORTHO05D000430 4.1e-07 58.5 54 51.9
TAR628G0082 Trochodendron aralioides HOM05D000435 ORTHO05D000430 4.1e-07 58.5 56 50.0
EL10Ac1g00089 Beta vulgaris HOM05D000435 ORTHO05D000430 5.3e-07 58.2 56 50.0
CDE08G0944 Ceratophyllum demersum HOM05D000435 ORTHO05D000430 5.3e-07 58.2 56 50.0
Duzib177G0025 Durio zibethinus HOM05D000435 ORTHO05D000430 5.3e-07 58.2 54 51.9
BcaC08g45745 Brassica carinata HOM05D000435 ORTHO05D000430 7.0e-07 57.8 54 55.6
BolC6t38630H Brassica oleracea HOM05D000435 ORTHO05D000430 7.0e-07 57.8 54 55.6
Gohir.A05G275050 Gossypium hirsutum HOM05D000435 ORTHO05D000430 7.0e-07 57.8 54 50.0
MBI17_g36874_MAGBIO Magnolia biondii HOM05D000435 ORTHO05D000430 7.0e-07 57.8 56 51.8
Manes.02G192400 Manihot esculenta HOM05D000435 ORTHO05D000430 7.0e-07 57.8 56 48.2
Sp5g27030 Schrenkiella parvula HOM05D000435 ORTHO05D000430 7.0e-07 57.8 54 55.6
C06p35250 Brassica napus HOM05D000435 ORTHO05D000430 9.1e-07 57.4 54 55.6
CARHR064780 Cardamine hirsuta HOM05D000435 ORTHO05D000430 9.1e-07 57.4 54 53.7
AUR62004639 Chenopodium quinoa HOM05D000435 ORTHO05D000430 9.1e-07 57.4 56 50.0
AUR62022697 Chenopodium quinoa HOM05D000435 ORTHO05D000430 9.1e-07 57.4 56 50.0
Sabra19G0094400 Salix brachista HOM05D000435 ORTHO05D000430 9.1e-07 57.4 54 51.9
BcaB03g15630 Brassica carinata HOM05D000435 ORTHO05D000430 1.2e-06 57.0 54 55.6
TWI60G0352 Tripterygium wilfordii HOM05D000435 ORTHO05D000430 1.2e-06 57.0 56 50.0
Ah.05g178150 Amaranthus hybridus HOM05D000435 ORTHO05D000430 2.0e-06 56.2 56 46.4
DCAR_001051 Daucus carota HOM05D000435 ORTHO05D000430 2.6e-06 55.8 56 48.2
Lj7P290T10 Lonicera japonica HOM05D000435 ORTHO05D000430 2.6e-06 55.8 56 50.0
ATR0003G015 Amborella trichopoda HOM05D000435 ORTHO05D000430 3.4e-06 55.5 54 53.7
Aqoxy6G00146 Aquilegia oxysepala HOM05D000435 ORTHO05D000430 5.9e-06 54.7 56 44.6
SGA_v2.0_scaffold118G32489 Striga asiatica HOM05D000435 ORTHO05D000430 7.7e-06 54.3 49 61.2


User provided reference genes

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