Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0506150 Oryza sativa ssp. japonica HOM05D026108 ORTHO05D294651 3.9e-94 348.2 185 100.0
Os01g0134900 Oryza sativa ssp. japonica HOM05D000676 ORTHO05D003334 7.7e-10 68.2 49 57.1
Zm00001eb125060 Zea mays HOM05D000676 ORTHO05D003334 6.5e-09 65.1 50 58.0
Os01g0134800 Oryza sativa ssp. japonica HOM05D000676 ORTHO05D003334 1.1e-08 64.3 44 61.4
Zm00001eb367260 Zea mays HOM05D026108 ORTHO05D444077 2.1e-07 60.1 50 64.0
THA.LOC104816770 Tarenaya hassleriana HOM05D000676 ORTHO05D003334 4.7e-07 58.9 46 43.5
Gohir.A05G213200 Gossypium hirsutum HOM05D000676 ORTHO05D003334 8.0e-07 58.2 48 47.9
ClCG05G017670 Citrullus lanatus HOM05D000676 ORTHO05D003334 1.0e-06 57.8 49 46.9
Zm00001eb241670 Zea mays HOM05D000676 ORTHO05D003334 1.0e-06 57.8 49 53.1
Cpa.g.sc160.19 Carica papaya HOM05D000676 ORTHO05D003334 1.4e-06 57.4 48 45.8
MELO3C016851.2 Cucumis melo HOM05D000676 ORTHO05D003334 1.4e-06 57.4 49 44.9
Os07g0660466 Oryza sativa ssp. japonica HOM05D026108 ORTHO05D049575 1.4e-06 57.4 60 55.0
Zm00001eb125100 Zea mays HOM05D000676 ORTHO05D003334 1.4e-06 57.4 43 53.5
Duzib093G1982 Durio zibethinus HOM05D000676 ORTHO05D003334 1.8e-06 57.0 56 44.6
Sed0014059 Sechium edule HOM05D000676 ORTHO05D003334 1.8e-06 57.0 49 44.9
Thecc.08G081700 Theobroma cacao HOM05D000676 ORTHO05D003334 1.8e-06 57.0 50 44.0
Migut.L00896 Erythranthe guttata HOM05D000676 ORTHO05D003334 2.3e-06 56.6 84 33.3
Gohir.D05G216600 Gossypium hirsutum HOM05D000676 ORTHO05D003334 2.3e-06 56.6 43 51.2
Gorai.009G223500 Gossypium raimondii HOM05D000676 ORTHO05D003334 2.3e-06 56.6 43 51.2
Potri.002G113132 Populus trichocarpa HOM05D000676 ORTHO05D003334 2.3e-06 56.6 51 43.1
Sabra02G0089700 Salix brachista HOM05D000676 ORTHO05D003334 2.3e-06 56.6 51 43.1
AL1G20750 Arabidopsis lyrata HOM05D000676 ORTHO05D003334 3.0e-06 56.2 46 45.7
Duzib116G0909 Durio zibethinus HOM05D000676 ORTHO05D003334 3.0e-06 56.2 50 44.0
MELO3C026811.2 Cucumis melo HOM05D000676 ORTHO05D003334 4.0e-06 55.8 49 42.9
CsaV3_5G011220 Cucumis sativus L. HOM05D000676 ORTHO05D003334 4.0e-06 55.8 49 42.9
Os07g0456700 Oryza sativa ssp. japonica HOM05D000676 ORTHO05D003334 4.0e-06 55.8 43 48.8
AT1G10050 Arabidopsis thaliana HOM05D000676 ORTHO05D003334 5.2e-06 55.5 45 46.7
Sp1g08700 Schrenkiella parvula HOM05D000676 ORTHO05D003334 5.2e-06 55.5 46 45.7
CDE04G2155 Ceratophyllum demersum HOM05D000676 ORTHO05D003334 6.8e-06 55.1 51 45.1
Eucgr.F00108 Eucalyptus grandis HOM05D000676 ORTHO05D003334 6.8e-06 55.1 48 45.8
Nn5g30700 Nelumbo nucifera HOM05D000676 ORTHO05D003334 6.8e-06 55.1 44 50.0
Sed0014249 Sechium edule HOM05D000676 ORTHO05D003334 6.8e-06 55.1 49 42.9
HPP92_023702 Vanilla planifolia HOM05D000676 ORTHO05D003334 6.8e-06 55.1 49 44.9
CARHR010160 Cardamine hirsuta HOM05D000676 ORTHO05D003334 8.8e-06 54.7 62 38.7
Thhalv10006640m.g Eutrema salsugineum HOM05D000676 ORTHO05D003334 8.8e-06 54.7 62 38.7
Gohir.D06G024600 Gossypium hirsutum HOM05D000676 ORTHO05D003334 8.8e-06 54.7 74 31.1
Gorai.010G029100 Gossypium raimondii HOM05D000676 ORTHO05D003334 8.8e-06 54.7 74 31.1
PGR083G2269 Punica granatum HOM05D000676 ORTHO05D003334 8.8e-06 54.7 48 43.8
SalBow1G7212 Salvia bowleyana HOM05D000676 ORTHO05D003334 8.8e-06 54.7 47 42.6


User provided reference genes

Program Settings