Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0458600 Oryza sativa ssp. japonica HOM05D037584 ORTHO05D000536 1.3e-108 396.4 187 100.0
Os07g0297100 Oryza sativa ssp. japonica HOM05D037584 ORTHO05D000536 4.3e-16 89.0 156 37.2
Os10g0423300 Oryza sativa ssp. japonica HOM05D000563 ORTHO05D000536 1.3e-12 77.4 162 32.7
Zm00001eb176820 Zea mays HOM05D000563 ORTHO05D000536 3.7e-12 75.9 193 31.1
Os11g0622600 Oryza sativa ssp. japonica HOM05D000563 ORTHO05D000536 4.1e-11 72.4 136 35.3
Os10g0423800 Oryza sativa ssp. japonica HOM05D000563 ORTHO05D000536 1.2e-10 70.9 152 34.9
Os11g0631600 Oryza sativa ssp. japonica HOM05D037584 ORTHO05D301791 4.6e-10 68.9 166 32.5
PSO478G2840 Papaver somniferum HOM05D000563 ORTHO05D000536 4.6e-10 68.9 167 33.5
Zm00001eb050730 Zea mays HOM05D000563 ORTHO05D000536 6.0e-10 68.6 139 31.7
Hma1.2p1_1644F.1_g295280 Hydrangea macrophylla HOM05D000563 ORTHO05D000536 2.3e-09 66.6 127 35.4
Os10g0427300 Oryza sativa ssp. japonica HOM05D000563 ORTHO05D000536 2.3e-09 66.6 132 29.5
Zm00001eb047620 Zea mays HOM05D000563 ORTHO05D000536 3.0e-09 66.2 127 32.3
TAR362G1116 Trochodendron aralioides HOM05D000563 ORTHO05D000536 3.9e-09 65.9 126 33.3
ECA236G1975 Erigeron canadensis HOM05D000563 ORTHO05D000536 5.1e-09 65.5 126 33.3
Lsat_1_v5_gn_8_109901 Lactuca sativa HOM05D000563 ORTHO05D000536 6.6e-09 65.1 126 34.1
Os02g0309500 Oryza sativa ssp. japonica HOM05D000563 ORTHO05D000536 6.6e-09 65.1 124 33.1
Lj6C663T23 Lonicera japonica HOM05D000563 ORTHO05D000536 8.6e-09 64.7 127 33.1
PSO384G0686 Papaver somniferum HOM05D000563 ORTHO05D000536 8.6e-09 64.7 115 33.0
Zm00001eb047910 Zea mays HOM05D000563 ORTHO05D000536 1.1e-08 64.3 130 31.5
Os10g0435400 Oryza sativa ssp. japonica HOM05D000563 ORTHO05D000536 1.5e-08 63.9 143 33.6
PSO384G0559 Papaver somniferum HOM05D000563 ORTHO05D000536 1.5e-08 63.9 115 34.8
Dinv44471 Davidia involucrata HOM05D000563 ORTHO05D000536 1.9e-08 63.5 126 34.1
Os10g0429300 Oryza sativa ssp. japonica HOM05D000563 ORTHO05D000536 1.9e-08 63.5 116 33.6
Zm00001eb065610 Zea mays HOM05D000563 ORTHO05D000536 1.9e-08 63.5 120 35.0
Os02g0309200 Oryza sativa ssp. japonica HOM05D000563 ORTHO05D000536 3.3e-08 62.8 139 29.5
PSO170G0017 Papaver somniferum HOM05D000563 ORTHO05D000536 3.3e-08 62.8 140 31.4
TWI60G0467 Tripterygium wilfordii HOM05D000563 ORTHO05D000536 3.3e-08 62.8 126 35.7
AL3G17050 Arabidopsis lyrata HOM05D000563 ORTHO05D000536 4.3e-08 62.4 127 35.4
AT3G06190 Arabidopsis thaliana HOM05D000563 ORTHO05D000536 4.3e-08 62.4 127 35.4
DCAR_002421 Daucus carota HOM05D000563 ORTHO05D000536 4.3e-08 62.4 126 33.3
Os10g0434000 Oryza sativa ssp. japonica HOM05D000563 ORTHO05D000536 4.3e-08 62.4 130 33.8
Peaxi162Scf00095g00912 Petunia axillaris HOM05D000563 ORTHO05D000536 4.3e-08 62.4 126 33.3
A03p09250 Brassica napus HOM05D000563 ORTHO05D000536 5.6e-08 62.0 126 34.1
BraA03t10244Z Brassica rapa HOM05D000563 ORTHO05D000536 5.6e-08 62.0 126 34.1
Manes.03G186200 Manihot esculenta HOM05D000563 ORTHO05D000536 5.6e-08 62.0 126 32.5
Nitab4.5_0000732g0190 Nicotiana tabacum HOM05D000563 ORTHO05D000536 5.6e-08 62.0 126 32.5
Os10g0425700 Oryza sativa ssp. japonica HOM05D000563 ORTHO05D000536 7.3e-08 61.6 138 31.9
Os10g0428900 Oryza sativa ssp. japonica HOM05D000563 ORTHO05D000536 7.3e-08 61.6 123 32.5
Solyc01g080250.3 Solanum lycopersicum HOM05D000563 ORTHO05D000536 7.3e-08 61.6 126 33.3
Sopen01g032030 Solanum pennellii HOM05D000563 ORTHO05D000536 7.3e-08 61.6 126 33.3
PGSC0003DMG400004349 Solanum tuberosum HOM05D000563 ORTHO05D000536 7.3e-08 61.6 126 33.3
TWI34G1538 Tripterygium wilfordii HOM05D000563 ORTHO05D000536 7.3e-08 61.6 126 34.9
vmacro14941 Vaccinium macrocarpon HOM05D000563 ORTHO05D000536 7.3e-08 61.6 120 32.5
CAN.G522.3 Capsicum annuum HOM05D000563 ORTHO05D000536 9.6e-08 61.2 126 33.3
CDE01G0701 Ceratophyllum demersum HOM05D000563 ORTHO05D000536 9.6e-08 61.2 126 32.5
Os02g0310500 Oryza sativa ssp. japonica HOM05D000563 ORTHO05D000536 9.6e-08 61.2 129 29.5
BcaC03g13823 Brassica carinata HOM05D000563 ORTHO05D000536 1.2e-07 60.8 126 33.3
BolC2t07091H Brassica oleracea HOM05D000563 ORTHO05D000536 1.2e-07 60.8 126 33.3
DCAR_030589 Daucus carota HOM05D000563 ORTHO05D000536 1.6e-07 60.5 126 31.7
Os10g0429600 Oryza sativa ssp. japonica HOM05D000563 ORTHO05D000536 1.6e-07 60.5 123 37.4
Potri.010G029500 Populus trichocarpa HOM05D000563 ORTHO05D000536 1.6e-07 60.5 126 32.5
Sabra10G0011700 Salix brachista HOM05D000563 ORTHO05D000536 1.6e-07 60.5 126 32.5
Aa31LG11G11640 Aethionema arabicum HOM05D000563 ORTHO05D000536 2.1e-07 60.1 117 33.3
Thhalv10013699m.g Eutrema salsugineum HOM05D000563 ORTHO05D000536 2.1e-07 60.1 126 33.3
PSO414G0002 Papaver somniferum HOM05D000563 ORTHO05D000536 2.1e-07 60.1 139 29.5
PSO478G2779 Papaver somniferum HOM05D000563 ORTHO05D000536 2.1e-07 60.1 119 36.1
PSO714G0002 Papaver somniferum HOM05D000563 ORTHO05D000536 2.1e-07 60.1 139 29.5
BcaB01g05286 Brassica carinata HOM05D000563 ORTHO05D000536 2.8e-07 59.7 126 32.5
C03p10780 Brassica napus HOM05D000563 ORTHO05D000536 2.8e-07 59.7 126 32.5
QL12p022659 Quercus lobata HOM05D000563 ORTHO05D000536 2.8e-07 59.7 119 30.3
CDE12G0448 Ceratophyllum demersum HOM05D000563 ORTHO05D000536 3.6e-07 59.3 126 33.3
Os08g0129300 Oryza sativa ssp. japonica HOM05D000563 ORTHO05D000536 3.6e-07 59.3 142 34.5
Os10g0436100 Oryza sativa ssp. japonica HOM05D000563 ORTHO05D000536 3.6e-07 59.3 131 33.6
PSO384G1891 Papaver somniferum HOM05D000563 ORTHO05D000536 3.6e-07 59.3 118 33.1
Potri.008G200700 Populus trichocarpa HOM05D000563 ORTHO05D000536 3.6e-07 59.3 126 31.7
Prupe.1G149100 Prunus persica HOM05D000563 ORTHO05D000536 3.6e-07 59.3 125 32.8
BolC3t13551H Brassica oleracea HOM05D000563 ORTHO05D000536 4.7e-07 58.9 126 32.5
DCAR_000798 Daucus carota HOM05D000139 ORTHO05D000103 4.7e-07 58.9 133 30.1
PSO170G6118 Papaver somniferum HOM05D000563 ORTHO05D000536 6.2e-07 58.5 120 35.0
Phvul.001G104400 Phaseolus vulgaris HOM05D000563 ORTHO05D000536 6.2e-07 58.5 143 30.1
Zm00001eb049070 Zea mays HOM05D000563 ORTHO05D000536 6.2e-07 58.5 115 33.9
BcaB05g22790 Brassica carinata HOM05D000563 ORTHO05D000536 8.1e-07 58.2 126 32.5
BNapus_Darmor_BZH_scaffold_38p01220 Brassica napus HOM05D000563 ORTHO05D000536 8.1e-07 58.2 126 32.5
C02p10570 Brassica napus HOM05D000563 ORTHO05D000536 8.1e-07 58.2 126 32.5
BraA02t05609Z Brassica rapa HOM05D000563 ORTHO05D000536 8.1e-07 58.2 126 32.5
Os02g0311150 Oryza sativa ssp. japonica HOM05D000563 ORTHO05D000536 8.1e-07 58.2 126 33.3
CAN.G1184.7 Capsicum annuum HOM05D000563 ORTHO05D000536 1.4e-06 57.4 129 31.8
Mapoly0047s0089 Marchantia polymorpha HOM05D000563 ORTHO05D000536 1.4e-06 57.4 126 31.7
VMungo1383G2698 Vigna mungo HOM05D000563 ORTHO05D000536 1.4e-06 57.4 130 30.0
DCAR_002756 Daucus carota HOM05D000563 ORTHO05D000536 1.8e-06 57.0 120 30.0
Os10g0423400 Oryza sativa ssp. japonica HOM05D000563 ORTHO05D000536 1.8e-06 57.0 185 30.8
Os10g0434650 Oryza sativa ssp. japonica HOM05D000563 ORTHO05D000536 1.8e-06 57.0 131 34.4
Glyma.18G034700 Glycine max HOM05D000563 ORTHO05D000536 2.4e-06 56.6 119 31.9
BcaB08g37331 Brassica carinata HOM05D000563 ORTHO05D000536 3.1e-06 56.2 126 32.5
A03p10400 Brassica napus HOM05D000563 ORTHO05D000536 3.1e-06 56.2 126 32.5
C03p11940 Brassica napus HOM05D000563 ORTHO05D000536 3.1e-06 56.2 126 32.5
BolC3t13664H Brassica oleracea HOM05D000563 ORTHO05D000536 3.1e-06 56.2 126 32.5
BraA03t10352Z Brassica rapa HOM05D000563 ORTHO05D000536 3.1e-06 56.2 126 32.5
PSO384G3051 Papaver somniferum HOM05D000563 ORTHO05D000536 3.1e-06 56.2 118 33.1
Nitab4.5_0000647g0180 Nicotiana tabacum HOM05D000563 ORTHO05D000536 4.0e-06 55.8 144 31.2
Nitab4.5_0002592g0020 Nicotiana tabacum HOM05D000563 ORTHO05D000536 4.0e-06 55.8 133 31.6
unitig_61.g26327 Utricularia gibba HOM05D000563 ORTHO05D000536 5.2e-06 55.5 121 32.2
Zm00001eb222950 Zea mays HOM05D000563 ORTHO05D000536 5.2e-06 55.5 142 29.6
arahy.Tifrunner.gnm1.ann1.5RUK5M Arachis hypogaea HOM05D000563 ORTHO05D000536 6.8e-06 55.1 126 31.7
arahy.Tifrunner.gnm1.ann1.877CYK Arachis hypogaea HOM05D000563 ORTHO05D000536 6.8e-06 55.1 126 31.7
Thhalv10017774m.g Eutrema salsugineum HOM05D000563 ORTHO05D000536 6.8e-06 55.1 123 29.3
ClCG03G014380 Citrullus lanatus HOM05D000563 ORTHO05D000536 8.9e-06 54.7 125 32.0
unitig_0.g1199 Utricularia gibba HOM05D000563 ORTHO05D000536 8.9e-06 54.7 138 31.2


User provided reference genes

Program Settings