Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0457000 Oryza sativa ssp. japonica HOM05D000167 ORTHO05D296581 4.6e-116 421.8 310 100.0
Os11g0457300 Oryza sativa ssp. japonica HOM05D000167 ORTHO05D000640 1.8e-11 74.3 58 70.7
Lsat_1_v5_gn_9_17340 Lactuca sativa HOM05D000167 ORTHO05D000640 5.4e-08 62.8 46 56.5
Phvul.007G135800 Phaseolus vulgaris HOM05D000167 ORTHO05D000640 2.1e-07 60.8 48 58.3
Glyma.20G196000 Glycine max HOM05D000167 ORTHO05D000640 3.5e-07 60.1 48 58.3
Glyma.20G196201 Glycine max HOM05D000167 ORTHO05D000640 3.5e-07 60.1 46 63.0
Medtr1g090280 Medicago truncatula HOM05D000167 ORTHO05D048970 3.5e-07 60.1 58 48.3
Glyma.10G194000 Glycine max HOM05D000167 ORTHO05D000640 6.0e-07 59.3 48 58.3
TPR.G13390 Trifolium pratense HOM05D000167 ORTHO05D000640 6.0e-07 59.3 70 41.4
COL.COLO4_16113 Corchorus olitorius HOM05D000167 ORTHO05D000640 7.9e-07 58.9 51 47.1
VMungo0720G2746 Vigna mungo HOM05D000167 ORTHO05D000640 7.9e-07 58.9 46 58.7
arahy.Tifrunner.gnm1.ann1.Q2DHS0 Arachis hypogaea HOM05D000167 ORTHO05D000640 1.0e-06 58.5 50 46.0
HanXRQChr03g0078221 Helianthus annuus HOM05D000167 ORTHO05D000640 1.3e-06 58.2 46 50.0
Potri.006G179700 Populus trichocarpa HOM05D000167 ORTHO05D000640 1.3e-06 58.2 51 52.9
Cc01_g16510 Coffea canephora HOM05D000167 ORTHO05D000640 1.8e-06 57.8 53 49.1
HanXRQChr10g0279621 Helianthus annuus HOM05D000167 ORTHO05D000640 2.3e-06 57.4 46 50.0
Nitab4.5_0000403g0080 Nicotiana tabacum HOM05D000167 ORTHO05D000640 2.3e-06 57.4 57 47.4
Atru.chr10.2195 Acer truncatum HOM05D000167 ORTHO05D000640 3.0e-06 57.0 55 47.3
Atru.chr10.488 Acer truncatum HOM05D000167 ORTHO05D000640 3.0e-06 57.0 55 47.3
arahy.Tifrunner.gnm1.ann1.2U0JEX Arachis hypogaea HOM05D000167 ORTHO05D000640 3.0e-06 57.0 50 44.0
Sabra06G0136800 Salix brachista HOM05D000167 ORTHO05D000640 3.0e-06 57.0 51 49.0
Ca_10417_v3 Cicer arietinum L. HOM05D000167 ORTHO05D000640 3.9e-06 56.6 48 52.1
Manes.13G051300 Manihot esculenta HOM05D000167 ORTHO05D000640 8.7e-06 55.5 53 45.3


User provided reference genes

Program Settings