Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0425600 Oryza sativa ssp. japonica HOM05D005458 ORTHO05D005672 1.6e-19 99.0 71 100.0
Zm00001eb356280 Zea mays HOM05D005458 ORTHO05D005672 3.7e-13 77.8 72 87.5
Zm00001eb287790 Zea mays HOM05D005458 ORTHO05D005672 7.3e-09 63.5 42 78.6
Os05g0407100 Oryza sativa ssp. japonica HOM05D005458 ORTHO05D005672 1.2e-08 62.8 42 78.6
ATR1145G024 Amborella trichopoda HOM05D005458 ORTHO05D005672 2.1e-08 62.0 40 80.0
Pp3c12_4180 Physcomitrium patens HOM05D005458 ORTHO05D005672 8.1e-08 60.1 42 76.2
CiPaw.01G120800 Carya illinoinensis HOM05D005458 ORTHO05D005672 1.8e-07 58.9 43 79.1
Pp3c4_17970 Physcomitrium patens HOM05D005458 ORTHO05D005672 1.8e-07 58.9 42 73.8
CANSAT11G1273 Cannabis sativa HOM05D005458 ORTHO05D005672 2.4e-07 58.5 42 73.8
Peaxi162Scf00047g00517 Petunia axillaris HOM05D005458 ORTHO05D005672 4.0e-07 57.8 44 75.0
Prupe.1G008500 Prunus persica HOM05D005458 ORTHO05D005672 4.0e-07 57.8 42 73.8
Phvul.008G127837 Phaseolus vulgaris HOM05D005458 ORTHO05D005672 5.2e-07 57.4 73 57.5
Lj1g0002931 Lotus japonicus HOM05D005458 ORTHO05D005672 6.8e-07 57.0 44 75.0
Duzib138G0965 Durio zibethinus HOM05D005458 ORTHO05D005672 8.9e-07 56.6 44 75.0
Ciclev10006390m.g Citrus clementina HOM05D005458 ORTHO05D005672 1.2e-06 56.2 42 73.8
Glyma.08G351700 Glycine max HOM05D005458 ORTHO05D005672 1.2e-06 56.2 44 79.5
Manes.15G054000 Manihot esculenta HOM05D005458 ORTHO05D005672 1.2e-06 56.2 45 75.6
GSVIVG01021052001 Vitis vinifera HOM05D005458 ORTHO05D005672 1.2e-06 56.2 44 70.5
Duzib211G0320 Durio zibethinus HOM05D005458 ORTHO05D005672 1.5e-06 55.8 45 77.8
FvH4_4g16450 Fragaria vesca HOM05D005458 ORTHO05D005672 1.5e-06 55.8 42 71.4
Pp3c13_10560 Physcomitrium patens HOM05D005458 ORTHO05D005672 1.5e-06 55.8 42 71.4
Duzib133G0368 Durio zibethinus HOM05D005458 ORTHO05D005672 2.0e-06 55.5 45 77.8
Nn1g07886 Nelumbo nucifera HOM05D005458 ORTHO05D005672 2.0e-06 55.5 43 76.7
Pp3c12_4160 Physcomitrium patens HOM05D005458 ORTHO05D005672 2.6e-06 55.1 42 71.4
Gohir.D07G207100 Gossypium hirsutum HOM05D005458 ORTHO05D005672 3.4e-06 54.7 44 72.7
Gorai.001G233500 Gossypium raimondii HOM05D005458 ORTHO05D005672 3.4e-06 54.7 44 72.7
PSO017G2416 Papaver somniferum HOM05D005458 ORTHO05D005672 3.4e-06 54.7 43 74.4
PSO063G0044 Papaver somniferum HOM05D005458 ORTHO05D005672 3.4e-06 54.7 43 74.4
Ca_17417_v3 Cicer arietinum L. HOM05D005458 ORTHO05D005672 4.4e-06 54.3 74 51.4
arahy.Tifrunner.gnm1.ann1.XWTR79 Arachis hypogaea HOM05D005458 ORTHO05D005672 5.8e-06 53.9 44 70.5
CsaV3_2G011550 Cucumis sativus L. HOM05D005458 ORTHO05D005672 5.8e-06 53.9 43 72.1
Lalb_Chr19g0125681 Lupinus albus HOM05D005458 ORTHO05D005672 5.8e-06 53.9 40 72.5
Mapoly0075s0018 Marchantia polymorpha HOM05D005458 ORTHO05D005672 5.8e-06 53.9 44 72.7
Psat3g147360 Pisum sativum HOM05D005458 ORTHO05D005672 5.8e-06 53.9 74 51.4
Thecc.01G224300 Theobroma cacao HOM05D005458 ORTHO05D005672 5.8e-06 53.9 45 75.6
Migut.D02491 Erythranthe guttata HOM05D005458 ORTHO05D005672 7.6e-06 53.5 71 53.5
Gorai.004G226200 Gossypium raimondii HOM05D005458 ORTHO05D005672 7.6e-06 53.5 44 75.0
Lalb_Chr01g0022281 Lupinus albus HOM05D005458 ORTHO05D005672 7.6e-06 53.5 40 72.5
Potri.001G315400 Populus trichocarpa HOM05D005458 ORTHO05D005672 7.6e-06 53.5 44 72.7
Sc19g0007160 Simmondsia chinensis HOM05D005458 ORTHO05D005672 7.6e-06 53.5 45 73.3
TWI75G0430 Tripterygium wilfordii HOM05D005458 ORTHO05D005672 7.6e-06 53.5 43 72.1
EL10Ac3g07484 Beta vulgaris HOM05D005458 ORTHO05D005672 9.9e-06 53.1 42 69.0
Gohir.A07G157232 Gossypium hirsutum HOM05D005458 ORTHO05D005672 9.9e-06 53.1 45 68.9
Gohir.D07G163401 Gossypium hirsutum HOM05D005458 ORTHO05D005672 9.9e-06 53.1 45 68.9
Gorai.001G187200 Gossypium raimondii HOM05D005458 ORTHO05D005672 9.9e-06 53.1 45 68.9
PGSC0003DMG400031295 Solanum tuberosum HOM05D005458 ORTHO05D005672 9.9e-06 53.1 43 72.1


User provided reference genes

Program Settings