Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0323860 Oryza sativa ssp. japonica HOM05D035858 ORTHO05D007620 2.4e-41 171.8 89 100.0
Os11g0412484 Oryza sativa ssp. japonica HOM05D035858 ORTHO05D007620 2.4e-41 171.8 89 100.0
Zm00001eb112660 Zea mays HOM05D035858 ORTHO05D007620 1.0e-15 86.7 88 53.4
Duzib248G1522 Durio zibethinus HOM05D006691 ORTHO05D007620 1.4e-09 66.2 83 48.2
COL.COLO4_25981 Corchorus olitorius HOM05D006691 ORTHO05D007620 4.1e-09 64.7 89 41.6
SalBow6G5689 Salvia bowleyana HOM05D006691 ORTHO05D007620 3.5e-08 61.6 91 38.5
PSO675G5127 Papaver somniferum HOM05D006691 ORTHO05D007620 7.8e-08 60.5 89 42.7
DCAR_001560 Daucus carota HOM05D006691 ORTHO05D007620 1.0e-07 60.1 78 44.9
Cc00_g15110 Coffea canephora HOM05D006691 ORTHO05D007620 1.3e-07 59.7 84 47.6
Nitab4.5_0001413g0050 Nicotiana tabacum HOM05D006691 ORTHO05D007620 1.7e-07 59.3 82 43.9
Nitab4.5_0007454g0010 Nicotiana tabacum HOM05D006691 ORTHO05D007620 1.7e-07 59.3 81 46.9
PSO591G0314 Papaver somniferum HOM05D006691 ORTHO05D007620 2.9e-07 58.5 96 39.6
Lalb_Chr01g0007961 Lupinus albus HOM05D006691 ORTHO05D007620 3.9e-07 58.2 88 42.0
Nitab4.5_0013456g0010 Nicotiana tabacum HOM05D006691 ORTHO05D007620 3.9e-07 58.2 81 42.0
Hund06253 Selenicereus undatus HOM05D006691 ORTHO05D007620 5.0e-07 57.8 90 43.3
FAN15G0999 Fragaria x ananassa HOM05D006691 ORTHO05D007620 6.6e-07 57.4 90 37.8
Nitab4.5_0003234g0120 Nicotiana tabacum HOM05D006691 ORTHO05D007620 6.6e-07 57.4 82 48.8
CiPaw.06G132900 Carya illinoinensis HOM05D006691 ORTHO05D007620 1.5e-06 56.2 85 40.0
ClCG11G004170 Citrullus lanatus HOM05D006691 ORTHO05D007620 1.5e-06 56.2 82 40.2
Duzib132G0715 Durio zibethinus HOM05D006691 ORTHO05D007620 1.9e-06 55.8 79 41.8
Migut.B00211 Erythranthe guttata HOM05D006691 ORTHO05D007620 1.9e-06 55.8 83 44.6
arahy.Tifrunner.gnm1.ann1.D742FH Arachis hypogaea HOM05D006691 ORTHO05D007620 3.3e-06 55.1 33 69.7
DCAR_004781 Daucus carota HOM05D006691 ORTHO05D007620 3.3e-06 55.1 33 69.7
FvH4_2g09570 Fragaria vesca HOM05D006691 ORTHO05D007620 3.3e-06 55.1 90 36.7
FAN24G2625 Fragaria x ananassa HOM05D006691 ORTHO05D007620 3.3e-06 55.1 90 36.7
TPR.G1848 Trifolium pratense HOM05D006691 ORTHO05D007620 3.3e-06 55.1 33 69.7
arahy.Tifrunner.gnm1.ann1.43WB82 Arachis hypogaea HOM05D006691 ORTHO05D007620 4.3e-06 54.7 84 39.3
FAN27G2049 Fragaria x ananassa HOM05D006691 ORTHO05D007620 4.3e-06 54.7 90 36.7
PGSC0003DMG400030948 Solanum tuberosum HOM05D006691 ORTHO05D007620 4.3e-06 54.7 84 38.1
CsaV3_2G015000 Cucumis sativus L. HOM05D006691 ORTHO05D007620 5.6e-06 54.3 92 41.3
Gohir.D13G030800 Gossypium hirsutum HOM05D006691 ORTHO05D007620 7.3e-06 53.9 83 41.0
Gorai.005G245800 Gossypium raimondii HOM05D006691 ORTHO05D007620 7.3e-06 53.9 88 36.4
Gorai.013G035000 Gossypium raimondii HOM05D006691 ORTHO05D007620 7.3e-06 53.9 83 41.0
RcHm_v2.0_Chr6g0265861 Rosa chinensis HOM05D006691 ORTHO05D007620 7.3e-06 53.9 90 35.6
Sed0023451 Sechium edule HOM05D006691 ORTHO05D007620 7.3e-06 53.9 84 39.3
Sopen01g052090 Solanum pennellii HOM05D006691 ORTHO05D007620 7.3e-06 53.9 84 41.7
Actinidia00546 Actinidia chinensis HOM05D006691 ORTHO05D007620 9.5e-06 53.5 79 46.8
Gohir.A03G196700 Gossypium hirsutum HOM05D006691 ORTHO05D007620 9.5e-06 53.5 88 36.4
MD05G1061400 Malus domestica HOM05D006691 ORTHO05D007620 9.5e-06 53.5 84 39.3
Solyc01g109895.1 Solanum lycopersicum HOM05D006691 ORTHO05D007620 9.5e-06 53.5 84 36.9


User provided reference genes

Program Settings