Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os03g0435900 Oryza sativa ssp. japonica HOM05D004624 ORTHO05D005357 7.5e-44 180.3 100 100.0
Os11g0368172 Oryza sativa ssp. japonica HOM05D004624 ORTHO05D005357 7.5e-44 180.3 100 100.0
Os03g0824000 Oryza sativa ssp. japonica HOM05D004624 ORTHO05D005357 7.8e-33 143.7 93 90.3
Zm00001eb062930 Zea mays HOM05D004624 ORTHO05D005357 3.4e-28 128.3 96 79.2
Cpa.g.sc116.84 Carica papaya HOM05D004624 ORTHO05D005357 1.3e-14 83.2 57 75.4
ECA248G3900 Erigeron canadensis HOM05D004624 ORTHO05D005357 4.8e-14 81.3 77 62.3
Gorai.001G127500 Gossypium raimondii HOM05D004624 ORTHO05D005357 4.8e-14 81.3 71 66.2
arahy.Tifrunner.gnm1.ann1.Q8D3CZ Arachis hypogaea HOM05D004624 ORTHO05D005357 6.2e-14 80.9 68 66.2
arahy.Tifrunner.gnm1.ann1.QE2DSJ Arachis hypogaea HOM05D004624 ORTHO05D005357 6.2e-14 80.9 66 66.7
Duzib205G0906 Durio zibethinus HOM05D004624 ORTHO05D005357 8.1e-14 80.5 66 66.7
Gorai.008G288400 Gossypium raimondii HOM05D004624 ORTHO05D005357 8.1e-14 80.5 69 65.2
TWI74G0338 Tripterygium wilfordii HOM05D004624 ORTHO05D005357 8.1e-14 80.5 72 61.1
AUR62018375 Chenopodium quinoa HOM05D004624 ORTHO05D005357 1.1e-13 80.1 67 67.2
vmacro08998 Vaccinium macrocarpon HOM05D004624 ORTHO05D005357 1.1e-13 80.1 71 64.8
Glyma.01G100100 Glycine max HOM05D004624 ORTHO05D005357 1.4e-13 79.7 68 63.2
QL04p073121 Quercus lobata HOM05D004624 ORTHO05D005357 1.4e-13 79.7 51 78.4
Rhsim04G0113600 Rhododendron simsii HOM05D004624 ORTHO05D005357 1.4e-13 79.7 71 63.4
AUR62030290 Chenopodium quinoa HOM05D004624 ORTHO05D005357 1.8e-13 79.3 70 61.4
Eucgr.K01650 Eucalyptus grandis HOM05D004624 ORTHO05D005357 1.8e-13 79.3 66 68.2
Gohir.D07G118600 Gossypium hirsutum HOM05D004624 ORTHO05D005357 1.8e-13 79.3 71 64.8
Prupe.8G075600 Prunus persica HOM05D004624 ORTHO05D005357 1.8e-13 79.3 74 60.8
Aqoxy3G00212 Aquilegia oxysepala HOM05D004624 ORTHO05D005357 2.4e-13 79.0 65 70.8
MBI17_g08328_MAGBIO Magnolia biondii HOM05D004624 ORTHO05D005357 2.4e-13 79.0 50 78.0
Ca_07684_v3 Cicer arietinum L. HOM05D004624 ORTHO05D005357 3.1e-13 78.6 58 69.0
Ciclev10010500m.g Citrus clementina HOM05D004624 ORTHO05D005357 3.1e-13 78.6 67 67.2
Haze_02997 Corylus avellana HOM05D004624 ORTHO05D005357 3.1e-13 78.6 75 61.3
Glyma.03G068900 Glycine max HOM05D004624 ORTHO05D005357 3.1e-13 78.6 65 64.6
Gohir.D12G268300 Gossypium hirsutum HOM05D004624 ORTHO05D005357 3.1e-13 78.6 70 64.3
RcHm_v2.0_Chr7g0222161 Rosa chinensis HOM05D004624 ORTHO05D005357 3.1e-13 78.6 74 62.2
vmacro17426 Vaccinium macrocarpon HOM05D004624 ORTHO05D005357 3.1e-13 78.6 79 59.5
Cfa019982 Carpinus fangiana HOM05D004624 ORTHO05D005357 4.0e-13 78.2 68 66.2
Gohir.A07G114500 Gossypium hirsutum HOM05D004624 ORTHO05D005357 4.0e-13 78.2 71 63.4
Hma1.2p1_0223F.1_g094210 Hydrangea macrophylla HOM05D004624 ORTHO05D005357 4.0e-13 78.2 56 71.4
Manes.10G062600 Manihot esculenta HOM05D004624 ORTHO05D005357 4.0e-13 78.2 67 64.2
EL10Ac4g09929 Beta vulgaris HOM05D004624 ORTHO05D005357 5.3e-13 77.8 54 75.9
Haze_20251 Corylus avellana HOM05D004624 ORTHO05D005357 5.3e-13 77.8 68 66.2
Phvul.001G120800 Phaseolus vulgaris HOM05D004624 ORTHO05D005357 5.3e-13 77.8 63 66.7
Rhsim13G0121200 Rhododendron simsii HOM05D004624 ORTHO05D005357 5.3e-13 77.8 71 62.0
TWI53G0657 Tripterygium wilfordii HOM05D004624 ORTHO05D005357 5.3e-13 77.8 69 60.9
HanXRQChr11g0352301 Helianthus annuus HOM05D004624 ORTHO05D005357 6.9e-13 77.4 65 67.7
Thecc.03G049000 Theobroma cacao HOM05D004624 ORTHO05D005357 6.9e-13 77.4 69 63.8
Ah.13g077180 Amaranthus hybridus HOM05D004624 ORTHO05D005357 9.0e-13 77.0 67 65.7
CSS0035187 Camellia sinensis var. sinensis HOM05D004624 ORTHO05D005357 9.0e-13 77.0 67 65.7
Carub.0006s2800 Capsella rubella HOM05D004624 ORTHO05D005357 9.0e-13 77.0 68 61.8
CAN.G732.25 Capsicum annuum HOM05D004624 ORTHO05D005357 9.0e-13 77.0 54 72.2
PSO675G0528 Papaver somniferum HOM05D004624 ORTHO05D005357 9.0e-13 77.0 71 64.8
PGR142G2854 Punica granatum HOM05D004624 ORTHO05D005357 9.0e-13 77.0 63 69.8
AL6G43100 Arabidopsis lyrata HOM05D004624 ORTHO05D005357 1.2e-12 76.6 68 61.8
AT4G09550 Arabidopsis thaliana HOM05D004624 ORTHO05D005357 1.2e-12 76.6 68 61.8
BcaB03g15728 Brassica carinata HOM05D004624 ORTHO05D005357 1.2e-12 76.6 54 72.2
C06p33840 Brassica napus HOM05D004624 ORTHO05D005357 1.2e-12 76.6 54 72.2
BraA07t30607Z Brassica rapa HOM05D004624 ORTHO05D005357 1.2e-12 76.6 54 72.2
CARHR260420 Cardamine hirsuta HOM05D004624 ORTHO05D005357 1.2e-12 76.6 68 63.2
Cfa010947 Carpinus fangiana HOM05D004624 ORTHO05D005357 1.2e-12 76.6 67 65.7
DCAR_020589 Daucus carota HOM05D004624 ORTHO05D005357 1.2e-12 76.6 69 60.9
FvH4_5g29300 Fragaria vesca HOM05D004624 ORTHO05D005357 1.2e-12 76.6 74 60.8
FAN13G0550 Fragaria x ananassa HOM05D004624 ORTHO05D005357 1.2e-12 76.6 74 60.8
FAN18G4513 Fragaria x ananassa HOM05D004624 ORTHO05D005357 1.2e-12 76.6 74 60.8
Lj1g0004051 Lotus japonicus HOM05D004624 ORTHO05D005357 1.2e-12 76.6 68 61.8
MD03G1113900 Malus domestica HOM05D004624 ORTHO05D005357 1.2e-12 76.6 69 62.3
Medtr4g124060 Medicago truncatula HOM05D004624 ORTHO05D005357 1.2e-12 76.6 63 65.1
Lj4g0019310 Lotus japonicus HOM05D004624 ORTHO05D005357 1.5e-12 76.3 68 61.8
Medtr2g008230 Medicago truncatula HOM05D004624 ORTHO05D005357 1.5e-12 76.3 71 59.2
Nitab4.5_0003447g0020 Nicotiana tabacum HOM05D004624 ORTHO05D005357 1.5e-12 76.3 59 66.1
Psat0s1206g0080 Pisum sativum HOM05D004624 ORTHO05D005357 1.5e-12 76.3 63 65.1
TPR.G12609 Trifolium pratense HOM05D004624 ORTHO05D005357 1.5e-12 76.3 63 63.5
Atru.chr12.1276 Acer truncatum HOM05D004624 ORTHO05D005357 2.0e-12 75.9 67 65.7
BcaC08g45622 Brassica carinata HOM05D004624 ORTHO05D005357 2.0e-12 75.9 54 72.2
Dinv15634 Davidia involucrata HOM05D004624 ORTHO05D005357 2.0e-12 75.9 63 65.1
Lalb_Chr19g0128161 Lupinus albus HOM05D004624 ORTHO05D005357 2.0e-12 75.9 68 61.8
PSO541G4755 Papaver somniferum HOM05D004624 ORTHO05D005357 2.0e-12 75.9 66 62.1
Sp5g28970 Schrenkiella parvula HOM05D004624 ORTHO05D005357 2.0e-12 75.9 54 70.4
Sc13g0000990 Simmondsia chinensis HOM05D004624 ORTHO05D005357 2.0e-12 75.9 71 62.0
BcaC08g46798 Brassica carinata HOM05D004624 ORTHO05D005357 2.6e-12 75.5 54 70.4
C06p47930 Brassica napus HOM05D004624 ORTHO05D005357 2.6e-12 75.5 54 70.4
BolC6t39828H Brassica oleracea HOM05D004624 ORTHO05D005357 2.6e-12 75.5 54 70.4
BraA07t31513Z Brassica rapa HOM05D004624 ORTHO05D005357 2.6e-12 75.5 54 70.4
CSS0026932 Camellia sinensis var. sinensis HOM05D004624 ORTHO05D005357 2.6e-12 75.5 69 62.3
COL.COLO4_05868 Corchorus olitorius HOM05D004624 ORTHO05D005357 2.6e-12 75.5 66 63.6
CsaV3_2G010390 Cucumis sativus L. HOM05D004624 ORTHO05D005357 2.6e-12 75.5 82 54.9
Manes.15G024800 Manihot esculenta HOM05D004624 ORTHO05D005357 2.6e-12 75.5 65 61.5
HPP92_018529 Vanilla planifolia HOM05D004624 ORTHO05D005357 2.6e-12 75.5 78 55.1
CiPaw.10G042300 Carya illinoinensis HOM05D004624 ORTHO05D005357 3.4e-12 75.1 69 66.7
CDE05G2943 Ceratophyllum demersum HOM05D004624 ORTHO05D005357 3.4e-12 75.1 66 60.6
MELO3C008583.2 Cucumis melo HOM05D004624 ORTHO05D005357 3.4e-12 75.1 68 60.3
Thhalv10019414m.g Eutrema salsugineum HOM05D004624 ORTHO05D005357 3.4e-12 75.1 54 70.4
Nn7g37680 Nelumbo nucifera HOM05D004624 ORTHO05D005357 3.4e-12 75.1 63 65.1
PSO063G3723 Papaver somniferum HOM05D004624 ORTHO05D005357 3.4e-12 75.1 65 61.5
Sed0025002 Sechium edule HOM05D004624 ORTHO05D005357 3.4e-12 75.1 61 63.9
ECA238G3634 Erigeron canadensis HOM05D000185 ORTHO05D000105 4.5e-12 74.7 74 60.8
Migut.J01336 Erythranthe guttata HOM05D004624 ORTHO05D005357 4.5e-12 74.7 51 72.5
Nitab4.5_0000021g0900 Nicotiana tabacum HOM05D004624 ORTHO05D005357 4.5e-12 74.7 60 63.3
Sabra06G0024000 Salix brachista HOM05D004624 ORTHO05D005357 4.5e-12 74.7 78 57.7
Sabra16G0036900 Salix brachista HOM05D004624 ORTHO05D005357 4.5e-12 74.7 79 59.5
Sp6g08080 Schrenkiella parvula HOM05D004624 ORTHO05D005357 4.5e-12 74.7 68 61.8
CANSAT78G0048 Cannabis sativa HOM05D004624 ORTHO05D005357 5.8e-12 74.3 65 61.5
CANSAT78G2147 Cannabis sativa HOM05D004624 ORTHO05D005357 5.8e-12 74.3 65 61.5
Carub.0002s2054 Capsella rubella HOM05D004624 ORTHO05D005357 5.8e-12 74.3 51 74.5
Aqoxy3G02929 Aquilegia oxysepala HOM05D004624 ORTHO05D005357 7.6e-12 73.9 63 65.1
CSS0023921 Camellia sinensis var. sinensis HOM05D004624 ORTHO05D005357 7.6e-12 73.9 68 60.3
ClCG11G007400 Citrullus lanatus HOM05D004624 ORTHO05D005357 7.6e-12 73.9 61 65.6
COL.COLO4_37401 Corchorus olitorius HOM05D004624 ORTHO05D005357 7.6e-12 73.9 67 62.7
Potri.006G035900 Populus trichocarpa HOM05D004624 ORTHO05D005357 7.6e-12 73.9 53 69.8
QL07p012089 Quercus lobata HOM05D004624 ORTHO05D005357 7.6e-12 73.9 73 58.9
TPR.G16719 Trifolium pratense HOM05D004624 ORTHO05D005357 7.6e-12 73.9 63 61.9
BcaB03g15084 Brassica carinata HOM05D004624 ORTHO05D005357 1.0e-11 73.6 54 68.5
CAN.G65.122 Capsicum annuum HOM05D004624 ORTHO05D005357 1.0e-11 73.6 68 61.8
FAN08G1983 Fragaria x ananassa HOM05D004624 ORTHO05D005357 1.0e-11 73.6 74 59.5
Sabra16G0054100 Salix brachista HOM05D004624 ORTHO05D005357 1.0e-11 73.6 51 74.5
Peaxi162Scf00516g00035 Petunia axillaris HOM05D004624 ORTHO05D005357 1.3e-11 73.2 71 54.9
AT1G73790 Arabidopsis thaliana HOM05D004624 ORTHO05D005357 1.7e-11 72.8 61 65.6
DCAR_028787 Daucus carota HOM05D004624 ORTHO05D005357 1.7e-11 72.8 64 62.5
Migut.J01335 Erythranthe guttata HOM05D004624 ORTHO05D005357 1.7e-11 72.8 56 66.1
Migut.J01633 Erythranthe guttata HOM05D004624 ORTHO05D005357 1.7e-11 72.8 70 57.1
PGSC0003DMG400026480 Solanum tuberosum HOM05D004624 ORTHO05D005357 1.7e-11 72.8 66 59.1
GSVIVG01025772001 Vitis vinifera HOM05D004624 ORTHO05D005357 1.7e-11 72.8 69 62.3
Actinidia05484 Actinidia chinensis HOM05D004624 ORTHO05D005357 2.2e-11 72.4 62 66.1
AL2G33600 Arabidopsis lyrata HOM05D004624 ORTHO05D005357 2.2e-11 72.4 62 64.5
Nitab4.5_0002193g0050 Nicotiana tabacum HOM05D004624 ORTHO05D005357 2.2e-11 72.4 69 60.9
Nitab4.5_0006270g0030 Nicotiana tabacum HOM05D004624 ORTHO05D005357 2.2e-11 72.4 69 60.9
Potri.016G034200 Populus trichocarpa HOM05D004624 ORTHO05D005357 2.2e-11 72.4 67 61.2
Aa31LG4G10460 Aethionema arabicum HOM05D004624 ORTHO05D005357 2.9e-11 72.0 65 60.0
CARHR066880 Cardamine hirsuta HOM05D004624 ORTHO05D005357 2.9e-11 72.0 62 67.7
THA.LOC109116606 Tarenaya hassleriana HOM05D004624 ORTHO05D005357 2.9e-11 72.0 75 56.0
TAR633G0121 Trochodendron aralioides HOM05D004624 ORTHO05D005357 2.9e-11 72.0 68 63.2
Cpa.g.sc883.1 Carica papaya HOM05D004624 ORTHO05D005357 3.8e-11 71.6 53 69.8
Cc03_g11260 Coffea canephora HOM05D004624 ORTHO05D005357 3.8e-11 71.6 72 55.6
Nitab4.5_0000645g0040 Nicotiana tabacum HOM05D004624 ORTHO05D005357 3.8e-11 71.6 71 57.7
RcHm_v2.0_Chr1g0330241 Rosa chinensis HOM05D004624 ORTHO05D005357 3.8e-11 71.6 74 58.1
TAR627G0533 Trochodendron aralioides HOM05D004624 ORTHO05D005357 4.9e-11 71.2 63 63.5
Thecc.05G198400 Theobroma cacao HOM05D004624 ORTHO05D005357 8.4e-11 70.5 67 59.7
GSVIVG01021751001 Vitis vinifera HOM05D004624 ORTHO05D005357 8.4e-11 70.5 51 66.7
Sopen03g028160 Solanum pennellii HOM05D004624 ORTHO05D005357 1.1e-10 70.1 72 55.6
PRCOL_00005147 Prasinoderma coloniale HOM05D004624 ORTHO05D005357 1.4e-10 69.7 54 59.3
Pp3c13_4560 Physcomitrium patens HOM05D004624 ORTHO05D005357 1.9e-10 69.3 62 56.5
Nitab4.5_0006185g0060 Nicotiana tabacum HOM05D004624 ORTHO05D005357 2.5e-10 68.9 56 62.5
Lalb_Chr19g0128151 Lupinus albus HOM05D004624 ORTHO05D005357 3.2e-10 68.6 67 56.7
Peaxi162Scf00815g00038 Petunia axillaris HOM05D004624 ORTHO05D005357 3.2e-10 68.6 71 54.9
unitig_746.g26892 Utricularia gibba HOM05D004624 ORTHO05D005357 3.2e-10 68.6 54 66.7
FvH4_2g13790 Fragaria vesca HOM05D004624 ORTHO05D005357 1.6e-09 66.2 54 64.8
FAN24G0569 Fragaria x ananassa HOM05D004624 ORTHO05D005357 1.6e-09 66.2 54 64.8
Sopen06g029060 Solanum pennellii HOM05D004624 ORTHO05D005357 2.1e-09 65.9 68 54.4
SHI11762 Sapria himalayana HOM05D004624 ORTHO05D005357 6.0e-09 64.3 68 55.9
MCO02G029 Micromonas commoda HOM05D004624 ORTHO05D005357 1.3e-08 63.2 61 50.8
AagrBONN_evm.TU.Sc2ySwM_340.447 Anthoceros agrestis HOM05D004624 ORTHO05D005357 1.8e-08 62.8 58 53.4
Os03g0435800 Oryza sativa ssp. japonica HOM05D055460 ORTHO05D005357 1.8e-08 62.8 47 76.6
Os11g0362633 Oryza sativa ssp. japonica HOM05D055460 ORTHO05D005357 1.8e-08 62.8 47 76.6
Atru.chr12.1164 Acer truncatum HOM05D004624 ORTHO05D005357 6.7e-08 60.8 51 66.7
CBR_g23420 Chara braunii HOM05D004624 ORTHO05D005357 6.7e-08 60.8 71 45.1
SMO172G0211 Selaginella moellendorffii HOM05D004624 ORTHO05D005357 8.7e-08 60.5 49 57.1
MD11G1133700 Malus domestica HOM05D004624 ORTHO05D005357 1.5e-07 59.7 50 66.0
Pp3c12_8260 Physcomitrium patens HOM05D004624 ORTHO05D005357 1.5e-07 59.7 62 51.6
SalBow6G5026 Salvia bowleyana HOM05D004624 ORTHO05D005357 1.5e-07 59.7 46 63.0
Mapoly0109s0047 Marchantia polymorpha HOM05D004624 ORTHO05D005357 7.4e-07 57.4 65 46.2
Solyc03g097400.1 Solanum lycopersicum HOM05D004624 ORTHO05D005357 7.4e-07 57.4 52 57.7


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