Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0311550 Oryza sativa ssp. japonica HOM05D002388 ORTHO05D008833 9.7e-37 156.4 83 100.0
Eucgr.D02219 Eucalyptus grandis HOM05D002388 ORTHO05D008833 7.4e-29 130.2 79 82.3
Actinidia14785 Actinidia chinensis HOM05D002388 ORTHO05D008833 9.7e-29 129.8 79 83.5
PGR031G2620 Punica granatum HOM05D002388 ORTHO05D008833 9.7e-29 129.8 80 78.8
Cpa.g.sc13.304 Carica papaya HOM05D002388 ORTHO05D008833 1.3e-28 129.4 79 81.0
Potri.001G138100 Populus trichocarpa HOM05D002388 ORTHO05D008833 1.7e-28 129.0 79 79.7
Haze_08171 Corylus avellana HOM05D002388 ORTHO05D008833 2.2e-28 128.6 79 82.3
arahy.Tifrunner.gnm1.ann1.Y11EX9 Arachis hypogaea HOM05D002388 ORTHO05D008833 2.8e-28 128.3 79 81.0
CSS0033524 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 2.8e-28 128.3 78 83.3
CSS0026703 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 3.7e-28 127.9 78 83.3
MELO3C013830.2 Cucumis melo HOM05D002388 ORTHO05D008833 4.8e-28 127.5 79 79.7
THA.LOC104804589 Tarenaya hassleriana HOM05D002388 ORTHO05D008833 4.8e-28 127.5 79 79.7
CsaV3_3G001440 Cucumis sativus L. HOM05D002388 ORTHO05D008833 6.3e-28 127.1 79 79.7
Phvul.003G283500 Phaseolus vulgaris HOM05D002388 ORTHO05D008833 6.3e-28 127.1 79 78.5
Hma1.2p1_0870F.1_g230830 Hydrangea macrophylla HOM05D002388 ORTHO05D008833 8.2e-28 126.7 79 79.7
Sed0013912 Sechium edule HOM05D002388 ORTHO05D008833 8.2e-28 126.7 79 78.5
Dinv28991 Davidia involucrata HOM05D002388 ORTHO05D008833 1.4e-27 125.9 79 81.0
Sp5g29500 Schrenkiella parvula HOM05D002388 ORTHO05D008833 1.4e-27 125.9 79 79.7
CARHR067600 Cardamine hirsuta HOM05D002388 ORTHO05D008833 1.8e-27 125.6 79 78.5
Nitab4.5_0000556g0150 Nicotiana tabacum HOM05D002388 ORTHO05D008833 1.8e-27 125.6 79 79.7
CAN.G137.4 Capsicum annuum HOM05D002388 ORTHO05D008833 2.4e-27 125.2 79 81.0
CSS0006499 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 3.1e-27 124.8 79 82.3
Lj1g0006191 Lotus japonicus HOM05D002388 ORTHO05D008833 3.1e-27 124.8 78 79.5
vmacro14193 Vaccinium macrocarpon HOM05D002388 ORTHO05D008833 3.1e-27 124.8 79 77.2
Aa31LG4G4590 Aethionema arabicum HOM05D002388 ORTHO05D008833 4.1e-27 124.4 79 78.5
A02p19260 Brassica napus HOM05D002388 ORTHO05D008833 4.1e-27 124.4 79 78.5
BolC2t09212H Brassica oleracea HOM05D002388 ORTHO05D008833 4.1e-27 124.4 79 78.5
BraA07t31559Z Brassica rapa HOM05D002388 ORTHO05D008833 4.1e-27 124.4 79 78.5
Thhalv10019650m.g Eutrema salsugineum HOM05D002388 ORTHO05D008833 4.1e-27 124.4 79 78.5
FAN04G1000 Fragaria x ananassa HOM05D002388 ORTHO05D008833 4.1e-27 124.4 79 79.7
Sabra01G0106900 Salix brachista HOM05D002388 ORTHO05D008833 4.1e-27 124.4 79 78.5
Solyc08g005210.3 Solanum lycopersicum HOM05D002388 ORTHO05D008833 4.1e-27 124.4 79 81.0
Sopen08g001240 Solanum pennellii HOM05D002388 ORTHO05D008833 4.1e-27 124.4 79 81.0
TAR375G0363 Trochodendron aralioides HOM05D002388 ORTHO05D008833 4.1e-27 124.4 79 77.2
BraA02t06971Z Brassica rapa HOM05D002388 ORTHO05D008833 5.3e-27 124.0 79 78.5
CSS0009097 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 5.3e-27 124.0 79 82.3
Carub.0002s2112 Capsella rubella HOM05D002388 ORTHO05D008833 5.3e-27 124.0 79 77.2
DCAR_004281 Daucus carota HOM05D002388 ORTHO05D008833 5.3e-27 124.0 79 78.5
Nitab4.5_0002778g0070 Nicotiana tabacum HOM05D002388 ORTHO05D008833 5.3e-27 124.0 79 79.7
Prupe.5G029600 Prunus persica HOM05D002388 ORTHO05D008833 5.3e-27 124.0 79 77.2
CiPaw.11G097500 Carya illinoinensis HOM05D002388 ORTHO05D008833 7.0e-27 123.6 79 77.2
AUR62018655 Chenopodium quinoa HOM05D002388 ORTHO05D008833 7.0e-27 123.6 79 79.7
FAN18G1485 Fragaria x ananassa HOM05D002388 ORTHO05D008833 7.0e-27 123.6 79 77.2
Peaxi162Scf00185g00821 Petunia axillaris HOM05D002388 ORTHO05D008833 7.0e-27 123.6 79 77.2
QL12p001301 Quercus lobata HOM05D002388 ORTHO05D008833 7.0e-27 123.6 79 75.9
AL2G34200 Arabidopsis lyrata HOM05D003614 ORTHO05D004156 9.1e-27 123.2 79 75.9
AT1G74340 Arabidopsis thaliana HOM05D002388 ORTHO05D008833 9.1e-27 123.2 79 75.9
CANSAT21G0073 Cannabis sativa HOM05D002388 ORTHO05D008833 9.1e-27 123.2 79 78.5
FAN08G0310 Fragaria x ananassa HOM05D002388 ORTHO05D008833 9.1e-27 123.2 79 78.5
MD06G1025500 Malus domestica HOM05D002388 ORTHO05D008833 9.1e-27 123.2 79 75.9
SalBow6G3465 Salvia bowleyana HOM05D002388 ORTHO05D008833 9.1e-27 123.2 79 78.5
BcaC08g46864 Brassica carinata HOM05D002388 ORTHO05D008833 1.2e-26 122.9 79 78.5
BolC6t39879H Brassica oleracea HOM05D002388 ORTHO05D008833 1.2e-26 122.9 79 78.5
CiPaw.12G067300 Carya illinoinensis HOM05D002388 ORTHO05D008833 1.2e-26 122.9 79 77.2
Glyma.13G128600 Glycine max HOM05D002388 ORTHO05D008833 1.2e-26 122.9 79 77.2
RcHm_v2.0_Chr7g0211611 Rosa chinensis HOM05D002388 ORTHO05D008833 1.2e-26 122.9 79 77.2
AUR62007344 Chenopodium quinoa HOM05D002388 ORTHO05D008833 1.6e-26 122.5 79 79.7
COL.COLO4_16958 Corchorus olitorius HOM05D002388 ORTHO05D008833 1.6e-26 122.5 79 78.5
Gohir.D08G175050 Gossypium hirsutum HOM05D002388 ORTHO05D008833 1.6e-26 122.5 79 75.9
Gorai.004G182800 Gossypium raimondii HOM05D002388 ORTHO05D008833 1.6e-26 122.5 79 75.9
Glyma.10G041600 Glycine max HOM05D002388 ORTHO05D008833 2.0e-26 122.1 79 77.2
MD16G1280900 Malus domestica HOM05D002388 ORTHO05D008833 2.0e-26 122.1 79 74.7
Manes.04G058600 Manihot esculenta HOM05D002388 ORTHO05D008833 2.0e-26 122.1 79 77.2
SGA_v2.0_scaffold20G09240 Striga asiatica HOM05D002388 ORTHO05D008833 2.0e-26 122.1 82 73.2
Lalb_Chr05g0225791 Lupinus albus HOM05D002388 ORTHO05D008833 2.6e-26 121.7 78 78.2
Medtr8g066600 Medicago truncatula HOM05D002388 ORTHO05D008833 3.5e-26 121.3 79 75.9
TPR.G3364 Trifolium pratense HOM05D002388 ORTHO05D008833 3.5e-26 121.3 79 77.2
TAR119G0002 Trochodendron aralioides HOM05D002388 ORTHO05D008833 3.5e-26 121.3 78 75.6
Migut.A01083 Erythranthe guttata HOM05D002388 ORTHO05D008833 4.5e-26 120.9 79 74.7
PSO384G4479 Papaver somniferum HOM05D002388 ORTHO05D008833 5.9e-26 120.6 79 75.9
Thecc.03G308600 Theobroma cacao HOM05D002388 ORTHO05D008833 5.9e-26 120.6 79 77.2
Ah.12g055420 Amaranthus hybridus HOM05D002388 ORTHO05D008833 7.7e-26 120.2 79 73.4
HanXRQChr17g0538091 Helianthus annuus HOM05D002388 ORTHO05D008833 7.7e-26 120.2 79 74.7
Nn3g19407 Nelumbo nucifera HOM05D002388 ORTHO05D008833 7.7e-26 120.2 79 75.9
Sopen06g021590 Solanum pennellii HOM05D002388 ORTHO05D008833 7.7e-26 120.2 79 74.7
Duzib205G0142 Durio zibethinus HOM05D002388 ORTHO05D008833 1.0e-25 119.8 79 75.9
Medtr2g014320 Medicago truncatula HOM05D002388 ORTHO05D008833 1.0e-25 119.8 78 75.6
Peaxi162Scf00045g00216 Petunia axillaris HOM05D002388 ORTHO05D008833 1.0e-25 119.8 79 75.9
TWI81G0136 Tripterygium wilfordii HOM05D002388 ORTHO05D008833 1.0e-25 119.8 79 73.4
GSVIVG01013070001 Vitis vinifera HOM05D002388 ORTHO05D008833 1.0e-25 119.8 80 75.0
EL10Ac5g12027 Beta vulgaris HOM05D002388 ORTHO05D008833 1.3e-25 119.4 79 75.9
CAN.G474.16 Capsicum annuum HOM05D002388 ORTHO05D008833 1.3e-25 119.4 79 73.4
Ciclev10003014m.g Citrus clementina HOM05D002388 ORTHO05D008833 1.3e-25 119.4 79 73.4
PSO339G0280 Papaver somniferum HOM05D002388 ORTHO05D008833 1.7e-25 119.0 79 74.7
Cc08_g03400 Coffea canephora HOM05D002388 ORTHO05D008833 2.2e-25 118.6 79 75.9
ECA246G0855 Erigeron canadensis HOM05D002388 ORTHO05D008833 2.2e-25 118.6 79 72.2
PGSC0003DMG400003487 Solanum tuberosum HOM05D002388 ORTHO05D008833 2.2e-25 118.6 79 78.5
PGSC0003DMG400016784 Solanum tuberosum HOM05D002388 ORTHO05D008833 2.2e-25 118.6 79 73.4
TWI60G0513 Tripterygium wilfordii HOM05D002388 ORTHO05D008833 2.2e-25 118.6 79 72.2
Duzib068G0043 Durio zibethinus HOM05D002388 ORTHO05D008833 2.9e-25 118.2 78 75.6
Solyc06g066400.3 Solanum lycopersicum HOM05D002388 ORTHO05D008833 2.9e-25 118.2 79 73.4
Nitab4.5_0001632g0030 Nicotiana tabacum HOM05D002388 ORTHO05D008833 3.8e-25 117.9 78 73.1
Lsat_1_v5_gn_3_19620 Lactuca sativa HOM05D002388 ORTHO05D008833 5.0e-25 117.5 80 71.2
Psat4g122960 Pisum sativum HOM05D002388 ORTHO05D008833 5.0e-25 117.5 79 74.7
Nitab4.5_0000109g0080 Nicotiana tabacum HOM05D002388 ORTHO05D008833 1.9e-24 115.5 79 70.9
unitig_32.g10897 Utricularia gibba HOM05D002388 ORTHO05D008833 1.9e-24 115.5 79 72.2
Peaxi162Scf00038g00010 Petunia axillaris HOM05D002388 ORTHO05D008833 7.2e-24 113.6 79 72.2
ATR0564G363 Amborella trichopoda HOM05D002388 ORTHO05D008833 2.1e-23 112.1 78 69.2
CDE05G0657 Ceratophyllum demersum HOM05D002388 ORTHO05D008833 2.7e-23 111.7 78 67.9
Mapoly0067s0029 Marchantia polymorpha HOM05D002388 ORTHO05D008833 8.8e-22 106.7 79 62.0
SEGI_36022 Sequoiadendron giganteum HOM05D002388 ORTHO05D008833 2.0e-21 105.5 78 66.7
THA.LOC104808763 Tarenaya hassleriana HOM05D002388 ORTHO05D008833 2.6e-21 105.1 76 67.1
Nn1g00187 Nelumbo nucifera HOM05D002388 ORTHO05D008833 3.1e-19 98.2 57 80.7
AagrBONN_evm.TU.Sc2ySwM_228.4391 Anthoceros agrestis HOM05D003123 ORTHO05D003492 7.0e-19 97.1 84 57.1
Os02g0140101 Oryza sativa ssp. japonica HOM05D002388 ORTHO05D008833 2.0e-18 95.5 53 92.5
PGSC0003DMG400043827 Solanum tuberosum HOM05D002388 ORTHO05D008833 2.7e-18 95.1 79 67.1
Pp3c22_2990 Physcomitrium patens HOM05D002388 ORTHO05D008833 4.5e-18 94.4 79 60.8
SEGI_14802 Sequoiadendron giganteum HOM05D002388 ORTHO05D008833 7.2e-16 87.0 64 65.6
arahy.Tifrunner.gnm1.ann1.G961TR Arachis hypogaea HOM05D002388 ORTHO05D008833 1.0e-14 83.2 82 58.5
CSS0023919 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 1.0e-14 83.2 80 57.5
Hund14364 Selenicereus undatus HOM05D002388 ORTHO05D008833 1.0e-14 83.2 49 83.7
ClCG10G001370 Citrullus lanatus HOM05D002388 ORTHO05D008833 4.0e-14 81.3 51 76.5
BcaB05g24849 Brassica carinata HOM05D002388 ORTHO05D008833 2.0e-13 79.0 48 79.2
PGSC0003DMG400016734 Solanum tuberosum HOM05D002388 ORTHO05D008833 1.8e-11 72.4 53 69.8
Peaxi162Scf00218g02111 Petunia axillaris HOM05D004298 ORTHO05D008833 9.4e-08 60.1 39 69.2


User provided reference genes

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