Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0295000 Oryza sativa ssp. japonica HOM05D007131 ORTHO05D009026 6.7e-47 190.3 92 100.0
HPP92_007612 Vanilla planifolia HOM05D007131 ORTHO05D009026 6.1e-16 87.4 70 61.4
Carub.0008s0817 Capsella rubella HOM05D007131 ORTHO05D009026 2.6e-14 82.0 75 56.0
AL8G21510 Arabidopsis lyrata HOM05D007131 ORTHO05D009026 3.4e-14 81.6 75 56.0
EL10Ac7g17974 Beta vulgaris HOM05D007131 ORTHO05D009026 3.4e-14 81.6 75 56.0
Os12g0233300 Oryza sativa ssp. japonica HOM05D007131 ORTHO05D009026 3.4e-14 81.6 78 57.7
Potri.002G248800 Populus trichocarpa HOM05D007131 ORTHO05D009026 3.4e-14 81.6 69 63.8
Aa31sc517G10 Aethionema arabicum HOM05D007131 ORTHO05D009026 7.5e-14 80.5 68 57.4
CiPaw.14G041500 Carya illinoinensis HOM05D007131 ORTHO05D009026 7.5e-14 80.5 66 60.6
Hma1.2p1_1492F.1_g286770 Hydrangea macrophylla HOM05D007131 ORTHO05D009026 7.5e-14 80.5 64 60.9
Thecc.01G214300 Theobroma cacao HOM05D007131 ORTHO05D009026 9.8e-14 80.1 77 54.5
A06p39100 Brassica napus HOM05D007131 ORTHO05D009026 1.3e-13 79.7 75 54.7
Gorai.007G158200 Gossypium raimondii HOM05D007131 ORTHO05D009026 1.3e-13 79.7 77 51.9
QL09p048363 Quercus lobata HOM05D007131 ORTHO05D009026 1.3e-13 79.7 64 60.9
Cfa010368 Carpinus fangiana HOM05D007131 ORTHO05D009026 1.7e-13 79.3 67 61.2
Haze_03320 Corylus avellana HOM05D007131 ORTHO05D009026 1.7e-13 79.3 67 61.2
DCAR_004756 Daucus carota HOM05D007131 ORTHO05D009026 1.7e-13 79.3 70 58.6
Dinv28824 Davidia involucrata HOM05D007131 ORTHO05D009026 1.7e-13 79.3 67 61.2
Gohir.A11G141300 Gossypium hirsutum HOM05D007131 ORTHO05D009026 1.7e-13 79.3 74 54.1
Sabra02G0189500 Salix brachista HOM05D007131 ORTHO05D009026 1.7e-13 79.3 66 62.1
BcaB04g19580 Brassica carinata HOM05D007131 ORTHO05D009026 2.8e-13 78.6 77 53.2
TAR362G0782 Trochodendron aralioides HOM05D007131 ORTHO05D009026 3.7e-13 78.2 64 57.8
BcaC06g30783 Brassica carinata HOM05D007131 ORTHO05D009026 4.9e-13 77.8 75 53.3
CANSAT01G0405 Cannabis sativa HOM05D007131 ORTHO05D009026 4.9e-13 77.8 66 59.1
Duzib211G0587 Durio zibethinus HOM05D007131 ORTHO05D009026 4.9e-13 77.8 77 53.2
Eucgr.H00746 Eucalyptus grandis HOM05D007131 ORTHO05D009026 4.9e-13 77.8 60 63.3
THA.LOC104818990 Tarenaya hassleriana HOM05D007131 ORTHO05D009026 4.9e-13 77.8 69 58.0
QL09p048378 Quercus lobata HOM05D007131 ORTHO05D009026 6.3e-13 77.4 67 58.2
Sp2g18910 Schrenkiella parvula HOM05D007131 ORTHO05D009026 6.3e-13 77.4 75 52.0
C07p39240 Brassica napus HOM05D007131 ORTHO05D009026 8.3e-13 77.0 69 56.5
BolC7t44444H Brassica oleracea HOM05D007131 ORTHO05D009026 8.3e-13 77.0 69 56.5
Ciclev10032761m.g Citrus clementina HOM05D007131 ORTHO05D009026 8.3e-13 77.0 79 53.2
Prupe.8G193200 Prunus persica HOM05D007131 ORTHO05D009026 1.1e-12 76.6 64 59.4
Sc24g0003400 Simmondsia chinensis HOM05D007131 ORTHO05D009026 1.1e-12 76.6 74 55.4
GSVIVG01002500001 Vitis vinifera HOM05D007131 ORTHO05D009026 1.1e-12 76.6 60 61.7
BcaC04g23770 Brassica carinata HOM05D007131 ORTHO05D009026 1.8e-12 75.9 67 56.7
C09p04870 Brassica napus HOM05D007131 ORTHO05D009026 1.8e-12 75.9 67 56.7
Aqoxy2G04077 Aquilegia oxysepala HOM05D007131 ORTHO05D009026 2.4e-12 75.5 60 58.3
ClCG09G007600 Citrullus lanatus HOM05D007131 ORTHO05D009026 3.1e-12 75.1 70 54.3
MELO3C015773.2 Cucumis melo HOM05D007131 ORTHO05D009026 3.1e-12 75.1 80 50.0
Lalb_Chr13g0291041 Lupinus albus HOM05D007131 ORTHO05D009026 3.1e-12 75.1 71 56.3
Psat3g150760 Pisum sativum HOM05D007131 ORTHO05D009026 3.1e-12 75.1 72 54.2
THA.LOC104802654 Tarenaya hassleriana HOM05D007131 ORTHO05D009026 3.1e-12 75.1 69 58.0
Migut.N00650 Erythranthe guttata HOM05D007131 ORTHO05D009026 4.1e-12 74.7 60 61.7
Sed0006902 Sechium edule HOM05D007131 ORTHO05D009026 4.1e-12 74.7 79 50.6
PGSC0003DMG400020651 Solanum tuberosum HOM05D007131 ORTHO05D009026 4.1e-12 74.7 59 59.3
Cc01_g16360 Coffea canephora HOM05D007131 ORTHO05D009026 5.4e-12 74.3 60 60.0
FvH4_2g18050 Fragaria vesca HOM05D007131 ORTHO05D009026 5.4e-12 74.3 64 57.8
Dinv22999 Davidia involucrata HOM05D007131 ORTHO05D009026 7.0e-12 73.9 63 60.3
ECA247G2839 Erigeron canadensis HOM05D004243 ORTHO05D005018 7.0e-12 73.9 60 61.7
MD10G1154300 Malus domestica HOM05D007131 ORTHO05D009026 7.0e-12 73.9 64 57.8
CAN.G181.37 Capsicum annuum HOM05D007131 ORTHO05D009026 9.2e-12 73.6 59 57.6
CsaV3_7G027510 Cucumis sativus L. HOM05D007131 ORTHO05D009026 9.2e-12 73.6 80 48.8
FAN15G1265 Fragaria x ananassa HOM05D007131 ORTHO05D009026 9.2e-12 73.6 64 57.8
RcHm_v2.0_Chr6g0283441 Rosa chinensis HOM05D007131 ORTHO05D009026 9.2e-12 73.6 64 57.8
arahy.Tifrunner.gnm1.ann1.4977NQ Arachis hypogaea HOM05D007131 ORTHO05D009026 1.2e-11 73.2 66 56.1
Medtr7g053220 Medicago truncatula HOM05D007131 ORTHO05D009026 1.2e-11 73.2 72 54.2
SEGI_25619 Sequoiadendron giganteum HOM05D007131 ORTHO05D009026 1.6e-11 72.8 64 57.8
Nitab4.5_0000040g0390 Nicotiana tabacum HOM05D007131 ORTHO05D009026 2.0e-11 72.4 62 58.1
Solyc06g007590.3 Solanum lycopersicum HOM05D007131 ORTHO05D009026 2.0e-11 72.4 59 55.9
Sopen06g002490 Solanum pennellii HOM05D007131 ORTHO05D009026 2.0e-11 72.4 59 55.9
Duzib138G1926 Durio zibethinus HOM05D007131 ORTHO05D009026 2.7e-11 72.0 64 56.2
Nn1g09828 Nelumbo nucifera HOM05D007131 ORTHO05D009026 2.7e-11 72.0 81 46.9
ATR1149G002 Amborella trichopoda HOM05D007131 ORTHO05D009026 3.5e-11 71.6 60 56.7
MSTRG.12759 Avicennia marina HOM05D007131 ORTHO05D009026 3.5e-11 71.6 47 68.1
Glyma.08G345600 Glycine max HOM05D007131 ORTHO05D009026 3.5e-11 71.6 64 56.2
Lj1g0012821 Lotus japonicus HOM05D007131 ORTHO05D009026 3.5e-11 71.6 64 54.7
PSO675G2392 Papaver somniferum HOM05D007131 ORTHO05D009026 3.5e-11 71.6 77 46.8
unitig_37.g12881 Utricularia gibba HOM05D007131 ORTHO05D009026 3.5e-11 71.6 69 55.1
TPR.G26850 Trifolium pratense HOM05D007131 ORTHO05D009026 4.5e-11 71.2 72 52.8
MD05G1165000 Malus domestica HOM05D007131 ORTHO05D009026 5.9e-11 70.9 64 54.7
Phvul.008G134700 Phaseolus vulgaris HOM05D007131 ORTHO05D009026 5.9e-11 70.9 64 54.7
SMO201G0137 Selaginella moellendorffii HOM05D007131 ORTHO05D009026 5.9e-11 70.9 44 72.7
Actinidia09448 Actinidia chinensis HOM05D007131 ORTHO05D009026 7.8e-11 70.5 63 55.6
HanXRQChr08g0231751 Helianthus annuus HOM05D007131 ORTHO05D009026 7.8e-11 70.5 64 56.2
Pp3c1_40870 Physcomitrium patens HOM05D007131 ORTHO05D009026 1.0e-10 70.1 70 52.9
VMungo1383G1151 Vigna mungo HOM05D007131 ORTHO05D009026 1.0e-10 70.1 64 54.7
Actinidia23782 Actinidia chinensis HOM05D007131 ORTHO05D009026 1.3e-10 69.7 63 55.6
vmacro14706 Vaccinium macrocarpon HOM05D007131 ORTHO05D009026 1.3e-10 69.7 60 56.7
A09p04560 Brassica napus HOM05D007131 ORTHO05D009026 2.3e-10 68.9 90 45.6
BraA09t36091Z Brassica rapa HOM05D007131 ORTHO05D009026 2.3e-10 68.9 90 45.6
Rhsim01G0249500 Rhododendron simsii HOM05D007131 ORTHO05D009026 2.3e-10 68.9 64 53.1
AagrBONN_evm.TU.Sc2ySwM_368.401 Anthoceros agrestis HOM05D007131 ORTHO05D009026 5.0e-10 67.8 66 53.0
Lsat_1_v5_gn_9_17941 Lactuca sativa HOM05D007131 ORTHO05D009026 5.0e-10 67.8 61 54.1
SGA_v2.0_scaffold77G25283 Striga asiatica HOM05D007131 ORTHO05D009026 5.0e-10 67.8 61 59.0
Nitab4.5_0001471g0060 Nicotiana tabacum HOM05D007131 ORTHO05D009026 8.6e-10 67.0 65 55.4
PSO017G7069 Papaver somniferum HOM05D007131 ORTHO05D009026 8.6e-10 67.0 78 46.2
BolC9t53415H Brassica oleracea HOM05D007131 ORTHO05D009026 1.1e-09 66.6 80 47.5
CiPaw.14G045900 Carya illinoinensis HOM05D007131 ORTHO05D009026 3.3e-09 65.1 60 55.0
SalBow3G2460 Salvia bowleyana HOM05D007131 ORTHO05D009026 7.3e-09 63.9 40 70.0
TWI36G0143 Tripterygium wilfordii HOM05D007131 ORTHO05D009026 9.5e-09 63.5 36 77.8
CBR_g28074 Chara braunii HOM05D007131 ORTHO05D009026 1.6e-08 62.8 43 60.5
Oeu064654.1 Olea europaea HOM05D007131 ORTHO05D009026 2.8e-08 62.0 64 46.9
CBR_g41484 Chara braunii HOM05D007131 ORTHO05D009026 3.6e-08 61.6 43 62.8
Peaxi162Scf01069g00214 Petunia axillaris HOM05D007131 ORTHO05D009026 6.8e-07 57.4 60 50.0
CDE08G0780 Ceratophyllum demersum HOM05D007131 ORTHO05D009026 2.0e-06 55.8 44 61.4


User provided reference genes

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