Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0282600 Oryza sativa ssp. japonica HOM05D032270 ORTHO05D001514 1.1e-65 253.4 152 100.0
Os11g0542100 Oryza sativa ssp. japonica HOM05D000410 ORTHO05D001514 1.2e-19 100.5 110 59.1
Os04g0403200 Oryza sativa ssp. japonica HOM05D000410 ORTHO05D001514 5.2e-12 75.1 110 50.0
Os04g0402500 Oryza sativa ssp. japonica HOM05D000410 ORTHO05D002963 2.0e-11 73.2 105 46.7
Os11g0543100 Oryza sativa ssp. japonica HOM05D032270 ORTHO05D294230 5.7e-11 71.6 52 84.6
Zm00001eb084550 Zea mays HOM05D000410 ORTHO05D002963 1.7e-10 70.1 110 49.1
Zm00001eb421690 Zea mays HOM05D000410 ORTHO05D002963 6.4e-10 68.2 101 47.5
MBI07_g31501_MAGBIO Magnolia biondii HOM05D000410 ORTHO05D003410 2.4e-09 66.2 111 44.1
MBI11_g11957_MAGBIO Magnolia biondii HOM05D000410 ORTHO05D003410 4.1e-09 65.5 111 41.4
Zm00001eb242320 Zea mays HOM05D000410 ORTHO05D001514 5.4e-09 65.1 112 43.8
Zm00001eb084560 Zea mays HOM05D000410 ORTHO05D002963 9.2e-09 64.3 109 47.7
Zm00001eb242300 Zea mays HOM05D000410 ORTHO05D002963 1.7e-07 60.1 110 42.7
Zm00001eb421630 Zea mays HOM05D000410 ORTHO05D002963 3.9e-07 58.9 114 47.4
Nn4g22058 Nelumbo nucifera HOM05D000410 ORTHO05D003410 3.3e-06 55.8 109 40.4
Aqoxy5G02958 Aquilegia oxysepala HOM05D000410 ORTHO05D003410 7.3e-06 54.7 106 38.7
Os03g0744501 Oryza sativa ssp. japonica HOM05D032270 ORTHO05D296466 9.5e-06 54.3 109 40.4


User provided reference genes

Program Settings