Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0276300 Oryza sativa ssp. japonica HOM05D004989 ORTHO05D006335 3.7e-205 718.0 372 100.0
Zm00001eb168810 Zea mays HOM05D004989 ORTHO05D006335 4.5e-166 588.2 329 90.0
CiPaw.02G093300 Carya illinoinensis HOM05D004989 ORTHO05D006335 4.8e-136 488.4 370 67.0
TAR365G0616 Trochodendron aralioides HOM05D004989 ORTHO05D006335 1.8e-135 486.5 370 66.8
MD16G1186000 Malus domestica HOM05D004989 ORTHO05D006335 1.0e-133 480.7 372 65.3
RcHm_v2.0_Chr4g0417841 Rosa chinensis HOM05D004989 ORTHO05D006335 1.5e-132 476.9 320 73.8
Lj6g0002948 Lotus japonicus HOM05D004989 ORTHO05D006335 1.9e-132 476.5 369 65.3
Prupe.1G152800 Prunus persica HOM05D004989 ORTHO05D006335 1.9e-132 476.5 368 65.8
HanXRQChr12g0359311 Helianthus annuus HOM05D004989 ORTHO05D006335 7.2e-132 474.6 324 72.2
Potri.008G203600 Populus trichocarpa HOM05D004989 ORTHO05D006335 9.4e-132 474.2 320 72.5
Cfa015597 Carpinus fangiana HOM05D004989 ORTHO05D006335 1.2e-131 473.8 370 65.4
FvH4_4g14760 Fragaria vesca HOM05D004989 ORTHO05D006335 1.2e-131 473.8 321 73.2
PSO017G3853 Papaver somniferum HOM05D004989 ORTHO05D006335 2.7e-131 472.6 316 73.7
Medtr2g022530 Medicago truncatula HOM05D004989 ORTHO05D006335 3.6e-131 472.2 369 65.9
Nn1g02182 Nelumbo nucifera HOM05D004989 ORTHO05D006335 3.6e-131 472.2 370 65.1
HPP92_005520 Vanilla planifolia HOM05D004989 ORTHO05D006335 3.6e-131 472.2 370 66.2
Dinv38405 Davidia involucrata HOM05D004989 ORTHO05D006335 8.0e-131 471.1 368 65.5
Dinv44490 Davidia involucrata HOM05D004989 ORTHO05D006335 8.0e-131 471.1 368 67.1
CANSAT78G0752 Cannabis sativa HOM05D004989 ORTHO05D006335 1.0e-130 470.7 367 66.2
Manes.03G183100 Manihot esculenta HOM05D004989 ORTHO05D006335 1.0e-130 470.7 368 64.7
CSS0000312 Camellia sinensis var. sinensis HOM05D004989 ORTHO05D006335 1.4e-130 470.3 368 65.5
GSVIVG01017902001 Vitis vinifera HOM05D004989 ORTHO05D006335 1.4e-130 470.3 369 65.0
CSS0017868 Camellia sinensis var. sinensis HOM05D004989 ORTHO05D006335 1.8e-130 469.9 319 72.7
Peaxi162Scf00134g02033 Petunia axillaris HOM05D004989 ORTHO05D006335 3.0e-130 469.2 365 64.9
Cc03_g03230 Coffea canephora HOM05D004989 ORTHO05D006335 8.8e-130 467.6 366 63.4
Migut.G00301 Erythranthe guttata HOM05D004989 ORTHO05D006335 2.0e-129 466.5 364 65.4
EL10Ac3g05973 Beta vulgaris HOM05D004989 ORTHO05D006335 3.3e-129 465.7 365 64.4
MBI14_g28267_MAGBIO Magnolia biondii HOM05D004989 ORTHO05D006335 4.4e-129 465.3 363 66.1
MELO3C006557.2 Cucumis melo HOM05D004989 ORTHO05D006335 5.7e-129 464.9 368 66.6
Glyma.07G257800 Glycine max HOM05D004989 ORTHO05D006335 9.7e-129 464.2 368 64.7
Aqoxy3G00936 Aquilegia oxysepala HOM05D004989 ORTHO05D006335 2.2e-128 463.0 369 64.8
CAN.G69.27 Capsicum annuum HOM05D004989 ORTHO05D006335 2.8e-128 462.6 323 68.7
PSO478G2898 Papaver somniferum HOM05D004989 ORTHO05D006335 3.7e-128 462.2 312 73.1
VMungo1215G0587 Vigna mungo HOM05D004989 ORTHO05D006335 3.7e-128 462.2 368 64.7
Carub.0006s1748 Capsella rubella HOM05D004989 ORTHO05D006335 4.8e-128 461.8 370 64.9
Lalb_Chr18g0056141 Lupinus albus HOM05D004989 ORTHO05D006335 6.3e-128 461.5 367 64.6
QL06p003872 Quercus lobata HOM05D004989 ORTHO05D006335 6.3e-128 461.5 385 62.1
Solyc01g079860.3 Solanum lycopersicum HOM05D004989 ORTHO05D006335 6.3e-128 461.5 323 69.0
Sopen01g031620 Solanum pennellii HOM05D004989 ORTHO05D006335 6.3e-128 461.5 323 69.0
CsaV3_3G013610 Cucumis sativus L. HOM05D004989 ORTHO05D006335 1.1e-127 460.7 370 64.9
Phvul.003G091700 Phaseolus vulgaris HOM05D004989 ORTHO05D006335 1.1e-127 460.7 316 71.8
MSTRG.4001 Avicennia marina HOM05D004989 ORTHO05D006335 1.4e-127 460.3 365 62.5
CDE07G1289 Ceratophyllum demersum HOM05D004989 ORTHO05D006335 1.4e-127 460.3 317 70.7
Glyma.17G016200 Glycine max HOM05D004989 ORTHO05D006335 1.4e-127 460.3 316 71.2
Sed0017941 Sechium edule HOM05D004989 ORTHO05D006335 2.4e-127 459.5 370 64.1
Thecc.04G224100 Theobroma cacao HOM05D004989 ORTHO05D006335 3.1e-127 459.1 371 65.0
FAN17G0130 Fragaria x ananassa HOM05D004989 ORTHO05D006335 4.1e-127 458.8 339 68.7
THA.LOC104818802 Tarenaya hassleriana HOM05D004989 ORTHO05D006335 4.1e-127 458.8 373 64.1
arahy.Tifrunner.gnm1.ann1.L7AGGG Arachis hypogaea HOM05D004989 ORTHO05D006335 5.3e-127 458.4 378 62.7
ECA234G2869 Erigeron canadensis HOM05D004989 ORTHO05D006335 7.0e-127 458.0 322 68.6
AT5G19150 Arabidopsis thaliana HOM05D004989 ORTHO05D006335 9.1e-127 457.6 370 63.8
Thhalv10013830m.g Eutrema salsugineum HOM05D004989 ORTHO05D006335 1.2e-126 457.2 370 64.1
SalBow2G0224 Salvia bowleyana HOM05D004989 ORTHO05D006335 1.2e-126 457.2 375 62.1
vmacro15315 Vaccinium macrocarpon HOM05D004989 ORTHO05D006335 1.6e-126 456.8 371 62.8
Ca_00634_v3 Cicer arietinum L. HOM05D004989 ORTHO05D006335 2.7e-126 456.1 377 62.6
arahy.Tifrunner.gnm1.ann1.8A1ZYN Arachis hypogaea HOM05D004989 ORTHO05D006335 4.5e-126 455.3 378 62.4
Aa31LG11G10490 Aethionema arabicum HOM05D004989 ORTHO05D006335 7.7e-126 454.5 326 69.6
Atru.chr4.2544 Acer truncatum HOM05D004989 ORTHO05D006335 1.0e-125 454.1 315 72.1
AL6G30570 Arabidopsis lyrata HOM05D004989 ORTHO05D006335 1.3e-125 453.8 370 64.3
BolC3t13560H Brassica oleracea HOM05D004989 ORTHO05D006335 1.1e-124 450.7 369 63.7
MSTRG.10011 Avicennia marina HOM05D004989 ORTHO05D006335 1.5e-124 450.3 322 68.0
Eucgr.B01122 Eucalyptus grandis HOM05D004989 ORTHO05D006335 1.5e-124 450.3 315 67.3
Sabra08G0157900 Salix brachista HOM05D004989 ORTHO05D006335 1.5e-124 450.3 353 65.2
Gohir.A02G029300 Gossypium hirsutum HOM05D004989 ORTHO05D006335 4.2e-124 448.7 370 63.8
CARHR193800 Cardamine hirsuta HOM05D004989 ORTHO05D006335 7.2e-124 448.0 370 63.2
BcaB01g04874 Brassica carinata HOM05D004989 ORTHO05D006335 9.4e-124 447.6 370 62.7
BraA02t05485Z Brassica rapa HOM05D004989 ORTHO05D006335 9.4e-124 447.6 318 69.5
Hund12013 Selenicereus undatus HOM05D004989 ORTHO05D006335 1.6e-123 446.8 314 68.5
Sp6g25210 Schrenkiella parvula HOM05D004989 ORTHO05D006335 2.1e-123 446.4 370 63.0
Gorai.005G041000 Gossypium raimondii HOM05D004989 ORTHO05D006335 2.7e-123 446.0 371 63.6
BcaC03g13646 Brassica carinata HOM05D004989 ORTHO05D006335 3.6e-123 445.7 318 69.5
BolC2t06940H Brassica oleracea HOM05D004989 ORTHO05D006335 3.6e-123 445.7 318 69.5
BraA03t10257Z Brassica rapa HOM05D004989 ORTHO05D006335 4.7e-123 445.3 383 61.1
BcaB05g23373 Brassica carinata HOM05D004989 ORTHO05D006335 6.1e-123 444.9 318 69.5
AUR62026218 Chenopodium quinoa HOM05D004989 ORTHO05D006335 8.0e-123 444.5 362 61.3
Gohir.D02G037100 Gossypium hirsutum HOM05D004989 ORTHO05D006335 1.4e-122 443.7 371 63.3
RcHm_v2.0_Chr0c32g0501471 Rosa chinensis HOM05D004989 ORTHO05D006335 1.8e-122 443.4 362 64.1
BcaB01g05136 Brassica carinata HOM05D004989 ORTHO05D006335 3.0e-122 442.6 368 62.8
FAN22G1009 Fragaria x ananassa HOM05D004989 ORTHO05D006335 4.0e-122 442.2 337 66.8
Ah.07g202120 Amaranthus hybridus HOM05D004989 ORTHO05D006335 2.0e-121 439.9 315 67.3
COL.COLO4_26626 Corchorus olitorius HOM05D004989 ORTHO05D006335 2.0e-121 439.9 404 58.4
C03p10950 Brassica napus HOM05D004989 ORTHO05D006335 5.7e-121 438.3 378 60.8
ATR0743G104 Amborella trichopoda HOM05D004989 ORTHO05D006335 7.5e-121 438.0 309 68.6
A03p09380 Brassica napus HOM05D004989 ORTHO05D006335 1.3e-120 437.2 362 63.0
PGSC0003DMG400009024 Solanum tuberosum HOM05D004989 ORTHO05D006335 1.3e-120 437.2 292 71.9
RcHm_v2.0_Chr0c32g0501661 Rosa chinensis HOM05D004989 ORTHO05D006335 1.7e-120 436.8 307 72.3
Nitab4.5_0000630g0050 Nicotiana tabacum HOM05D004989 ORTHO05D006335 2.2e-120 436.4 290 71.4
A02p05270 Brassica napus HOM05D004989 ORTHO05D006335 1.1e-119 434.1 310 69.7
C02p10390 Brassica napus HOM05D004989 ORTHO05D006335 5.9e-118 428.3 310 68.7
RcHm_v2.0_Chr3g0483801 Rosa chinensis HOM05D004989 ORTHO05D006335 1.0e-117 427.6 283 74.2
Nitab4.5_0005927g0020 Nicotiana tabacum HOM05D004989 ORTHO05D006335 2.2e-117 426.4 390 58.2
unitig_736.g22488 Utricularia gibba HOM05D004989 ORTHO05D006335 6.5e-117 424.9 314 65.3
Rhsim02G0020900 Rhododendron simsii HOM05D004989 ORTHO05D006335 5.5e-116 421.8 357 59.9
C03p10960 Brassica napus HOM05D004989 ORTHO05D006335 7.2e-116 421.4 371 59.8
Lj6g0017812 Lotus japonicus HOM05D004989 ORTHO05D006335 4.0e-114 415.6 322 64.6
TWI73G0966 Tripterygium wilfordii HOM05D004989 ORTHO05D006335 1.2e-113 414.1 370 58.6
Sc13g0004100 Simmondsia chinensis HOM05D004989 ORTHO05D006335 9.8e-113 411.0 307 67.4
Ciclev10005119m.g Citrus clementina HOM05D004989 ORTHO05D006335 3.1e-111 406.0 310 66.5
Actinidia36991 Actinidia chinensis HOM05D004989 ORTHO05D006335 3.8e-109 399.1 319 64.9
Haze_00947 Corylus avellana HOM05D004989 ORTHO05D006335 6.6e-109 398.3 361 58.2
Oeu042787.2 Olea europaea HOM05D004989 ORTHO05D006335 2.1e-107 393.3 432 50.0
Psat1g182800 Pisum sativum HOM05D004989 ORTHO05D006335 1.0e-106 391.0 254 72.0
Lj6A574T37 Lonicera japonica HOM05D004989 ORTHO05D006335 2.2e-104 383.3 253 71.5
Hma1.2p1_2553F.1_g324330 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 8.3e-104 381.3 257 71.2
Mapoly0063s0079 Marchantia polymorpha HOM05D004989 ORTHO05D006335 4.7e-99 365.5 319 58.0
CBR_g26053 Chara braunii HOM05D004989 ORTHO05D006335 5.2e-98 362.1 328 56.4
SMO361G0104 Selaginella moellendorffii HOM05D004989 ORTHO05D006335 1.9e-95 353.6 307 58.3
C03p10910 Brassica napus HOM05D004989 ORTHO05D006335 1.3e-93 347.4 260 66.5
HPP92_005588 Vanilla planifolia HOM05D004989 ORTHO05D006335 1.3e-93 347.4 303 61.7
SHI00391 Sapria himalayana HOM05D004989 ORTHO05D006335 2.4e-87 326.6 259 62.9
AagrBONN_evm.TU.Sc2ySwM_344.1251 Anthoceros agrestis HOM05D004989 ORTHO05D006335 3.2e-87 326.2 320 53.8
C03p10860 Brassica napus HOM05D004989 ORTHO05D006335 1.2e-86 324.3 322 55.6
BcaB01g05294 Brassica carinata HOM05D004989 ORTHO05D006335 2.5e-84 316.6 334 53.3
ClCG05G005360 Citrullus lanatus HOM05D004989 ORTHO05D006335 2.8e-83 313.2 255 63.1
Pp3c8_1650 Physcomitrium patens HOM05D004989 ORTHO05D006335 8.9e-82 308.1 283 55.5
Duzib151G0886 Durio zibethinus HOM05D004989 ORTHO05D006335 2.0e-81 307.0 326 53.1
PGR142G2933 Punica granatum HOM05D004989 ORTHO05D006335 2.0e-81 307.0 369 47.4
SGA_v2.0_scaffold39G15320 Striga asiatica HOM05D004989 ORTHO05D006335 1.3e-80 304.3 198 71.7
FAN07G2774 Fragaria x ananassa HOM05D004989 ORTHO05D006335 3.0e-69 266.5 227 60.8
arahy.Tifrunner.gnm1.ann1.BS3LH0 Arachis hypogaea HOM05D004989 ORTHO05D006335 2.5e-68 263.5 378 43.7
Hma1.2p1_2553F.1_g324320 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 2.1e-67 260.4 198 65.7
TPR.G28611 Trifolium pratense HOM05D004989 ORTHO05D006739 2.8e-67 260.0 176 69.9
Cre06.g250500 Chlamydomonas reinhardtii HOM05D004989 ORTHO05D006335 1.8e-66 257.3 355 40.3
arahy.Tifrunner.gnm1.ann1.J5ZRE9 Arachis hypogaea HOM05D004989 ORTHO05D006335 6.0e-62 242.3 191 62.3
MCO05G313 Micromonas commoda HOM05D004989 ORTHO05D006335 3.3e-60 236.5 348 39.1
arahy.Tifrunner.gnm1.ann1.HR1U72 Arachis hypogaea HOM05D004989 ORTHO05D006335 2.1e-59 233.8 190 61.6
SEGI_35556 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 1.4e-58 231.1 201 59.2
Ca_00654_v3 Cicer arietinum L. HOM05D004989 ORTHO05D006335 4.5e-57 226.1 198 60.6
TPR.G30683 Trifolium pratense HOM05D004989 ORTHO05D006335 1.0e-53 214.9 165 64.2
PRCOL_00001617 Prasinoderma coloniale HOM05D004989 ORTHO05D006335 1.5e-52 211.1 352 37.2
Cpa.g.sc147.7 Carica papaya HOM05D004989 ORTHO05D006335 1.3e-51 208.0 187 61.0
Hma1.2p1_0995F.1_g245810 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 3.7e-51 206.5 179 64.8
Haze_26760 Corylus avellana HOM05D004980 ORTHO05D006505 4.0e-50 203.0 266 42.9
SEGI_27897 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 4.0e-50 203.0 124 77.4
SEGI_07547 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 6.9e-50 202.2 125 76.0
Cfa024379 Carpinus fangiana HOM05D004989 ORTHO05D006335 2.1e-46 190.7 286 37.8
Atru.chr4.2545 Acer truncatum HOM05D004989 ORTHO05D006335 1.5e-44 184.5 151 61.6
Hund03167 Selenicereus undatus HOM05D004989 ORTHO05D006335 2.4e-42 177.2 114 71.9
Cre05.g234664 Chlamydomonas reinhardtii HOM05D004989 ORTHO05D006335 2.7e-38 163.7 281 35.9
SEGI_12399 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 1.3e-32 144.8 129 57.4
Atru.chr4.2547 Acer truncatum HOM05D004989 ORTHO05D000586 2.5e-31 140.6 91 73.6
Actinidia08511 Actinidia chinensis HOM05D004989 ORTHO05D006335 3.1e-26 123.6 312 32.1
Cpa.g.sc147.5 Carica papaya HOM05D004989 ORTHO05D006335 2.2e-24 117.5 95 64.2
Cfa015379 Carpinus fangiana HOM05D000407 ORTHO05D002981 1.4e-23 114.8 129 49.6
Cpa.g.sc147.6 Carica papaya HOM05D004989 ORTHO05D006335 2.2e-19 100.9 70 64.3
TPR.G30666 Trifolium pratense HOM05D004989 ORTHO05D006335 2.2e-19 100.9 87 62.1
CBR_g19747 Chara braunii HOM05D000409 ORTHO05D000184 9.1e-18 95.5 82 56.1
AUR62026378 Chenopodium quinoa HOM05D004989 ORTHO05D006335 6.1e-14 82.8 71 57.7
FAN07G1160 Fragaria x ananassa HOM05D004989 ORTHO05D006335 1.0e-08 65.5 44 72.7


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