Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0267000 Oryza sativa ssp. japonica HOM05D006659 ORTHO05D008372 1.5e-131 473.0 274 100.0
Zm00001eb406810 Zea mays HOM05D006659 ORTHO05D008372 3.8e-90 335.5 277 73.3
PGR083G0301 Punica granatum HOM05D006659 ORTHO05D008372 1.5e-65 253.8 193 65.3
Lj3g0013401 Lotus japonicus HOM05D006659 ORTHO05D008372 1.9e-65 253.4 269 56.9
Manes.11G120400 Manihot esculenta HOM05D006659 ORTHO05D008372 1.6e-64 250.4 196 64.3
GSVIVG01010754001 Vitis vinifera HOM05D006659 ORTHO05D008372 8.1e-64 248.1 194 63.4
Duzib151G0383 Durio zibethinus HOM05D006659 ORTHO05D008372 5.2e-63 245.4 192 63.5
Rhsim09G0027800 Rhododendron simsii HOM05D006659 ORTHO05D008372 6.8e-63 245.0 192 62.5
Thecc.04G179900 Theobroma cacao HOM05D006659 ORTHO05D008372 3.4e-62 242.7 192 62.5
Ca_20785_v3 Cicer arietinum L. HOM05D006659 ORTHO05D008372 5.8e-62 241.9 193 63.7
RhsimUnG0221100 Rhododendron simsii HOM05D006659 ORTHO05D008372 5.8e-62 241.9 192 62.0
VMungo1127G1494 Vigna mungo HOM05D006659 ORTHO05D008372 5.8e-62 241.9 196 61.2
arahy.Tifrunner.gnm1.ann1.AVW0M7 Arachis hypogaea HOM05D006659 ORTHO05D008372 1.3e-61 240.7 192 63.5
Glyma.12G052500 Glycine max HOM05D006659 ORTHO05D008372 1.3e-61 240.7 195 62.1
QL10p048762 Quercus lobata HOM05D006659 ORTHO05D008372 1.7e-61 240.4 281 50.2
THA.LOC104802307 Tarenaya hassleriana HOM05D006659 ORTHO05D008372 1.7e-61 240.4 193 62.7
Duzib212G0569 Durio zibethinus HOM05D006659 ORTHO05D008372 2.9e-61 239.6 192 60.9
ATR0824G177 Amborella trichopoda HOM05D006659 ORTHO05D008372 3.8e-61 239.2 194 60.3
MBI08_g14954_MAGBIO Magnolia biondii HOM05D006659 ORTHO05D008064 3.8e-61 239.2 193 62.7
TAR362G1327 Trochodendron aralioides HOM05D006659 ORTHO05D008372 4.9e-61 238.8 192 62.5
CSS0040017 Camellia sinensis var. sinensis HOM05D006659 ORTHO05D008372 8.4e-61 238.0 287 52.3
BcaC07g40458 Brassica carinata HOM05D006659 ORTHO05D008372 1.1e-60 237.7 190 63.2
CSS0046315 Camellia sinensis var. sinensis HOM05D006659 ORTHO05D008372 1.1e-60 237.7 276 57.2
Gohir.A10G137100 Gossypium hirsutum HOM05D006659 ORTHO05D008372 1.1e-60 237.7 192 59.9
Gohir.D10G129500 Gossypium hirsutum HOM05D006659 ORTHO05D008372 1.1e-60 237.7 192 59.9
Gorai.011G142800 Gossypium raimondii HOM05D006659 ORTHO05D008372 1.1e-60 237.7 192 59.9
TPR.G34236 Trifolium pratense HOM05D006659 ORTHO05D008372 1.1e-60 237.7 192 62.5
COL.COLO4_07662 Corchorus olitorius HOM05D006659 ORTHO05D008372 1.4e-60 237.3 189 64.0
Lsat_1_v5_gn_1_120661 Lactuca sativa HOM05D006659 ORTHO05D008372 1.9e-60 236.9 194 61.9
Sabra17G0019600 Salix brachista HOM05D006659 ORTHO05D008372 1.9e-60 236.9 193 61.7
Phvul.011G054500 Phaseolus vulgaris HOM05D006659 ORTHO05D008372 2.4e-60 236.5 196 60.2
arahy.Tifrunner.gnm1.ann1.Q6M2DC Arachis hypogaea HOM05D006659 ORTHO05D008372 3.2e-60 236.1 199 60.3
ClCG08G004640 Citrullus lanatus HOM05D006659 ORTHO05D008372 3.2e-60 236.1 192 60.9
Dinv22730 Davidia involucrata HOM05D006659 ORTHO05D008372 3.2e-60 236.1 154 69.5
Potri.007G128200 Populus trichocarpa HOM05D006659 ORTHO05D008372 3.2e-60 236.1 275 55.6
CiPaw.01G100500 Carya illinoinensis HOM05D006659 ORTHO05D008372 7.1e-60 235.0 280 48.9
Haze_01513 Corylus avellana HOM05D006659 ORTHO05D008372 7.1e-60 235.0 196 60.7
MELO3C011657.2 Cucumis melo HOM05D006659 ORTHO05D008372 1.6e-59 233.8 192 60.9
Lalb_Chr03g0026131 Lupinus albus HOM05D006659 ORTHO05D008372 1.6e-59 233.8 194 59.3
Medtr4g067150 Medicago truncatula HOM05D006659 ORTHO05D008372 1.6e-59 233.8 192 62.5
THA.LOC104803695 Tarenaya hassleriana HOM05D006659 ORTHO05D008372 1.6e-59 233.8 193 60.6
Gohir.A09G211000 Gossypium hirsutum HOM05D006659 ORTHO05D008372 2.1e-59 233.4 193 60.1
Gohir.D09G204400 Gossypium hirsutum HOM05D006659 ORTHO05D008372 2.1e-59 233.4 193 60.1
Prupe.1G193000 Prunus persica HOM05D006659 ORTHO05D008372 2.1e-59 233.4 280 52.1
Gorai.006G228300 Gossypium raimondii HOM05D006659 ORTHO05D008372 3.5e-59 232.6 193 60.1
CsaV3_6G003920 Cucumis sativus L. HOM05D006659 ORTHO05D008372 4.6e-59 232.3 192 60.4
Lalb_Chr01g0003161 Lupinus albus HOM05D006659 ORTHO05D008372 6.0e-59 231.9 194 59.8
TWI14G0225 Tripterygium wilfordii HOM05D006659 ORTHO05D008372 7.8e-59 231.5 193 59.6
TWI39G0181 Tripterygium wilfordii HOM05D006659 ORTHO05D008372 7.8e-59 231.5 193 59.6
Cc03_g13110 Coffea canephora HOM05D006659 ORTHO05D008372 1.3e-58 230.7 193 58.5
Psat7g214800 Pisum sativum HOM05D006659 ORTHO05D008372 1.3e-58 230.7 192 61.5
Sabra07G0104600 Salix brachista HOM05D006659 ORTHO05D008372 1.7e-58 230.3 267 58.8
CANSAT78G0008 Cannabis sativa HOM05D006659 ORTHO05D008372 2.3e-58 229.9 194 61.3
PSO675G8713 Papaver somniferum HOM05D006659 ORTHO05D008372 3.0e-58 229.6 193 58.5
Dinv44193 Davidia involucrata HOM05D006659 ORTHO05D008372 3.9e-58 229.2 188 59.6
MSTRG.24582 Avicennia marina HOM05D006659 ORTHO05D008372 6.6e-58 228.4 196 58.7
Ah.07g201990 Amaranthus hybridus HOM05D006659 ORTHO05D008372 8.6e-58 228.0 203 57.6
Atru.chr3.1492 Acer truncatum HOM05D006659 ORTHO05D008372 1.1e-57 227.6 193 60.1
ECA248G3871 Erigeron canadensis HOM05D006659 ORTHO05D008372 1.1e-57 227.6 192 62.0
Actinidia35977 Actinidia chinensis HOM05D006659 ORTHO05D008372 1.5e-57 227.3 263 58.6
Cpa.g.sc9.272 Carica papaya HOM05D006659 ORTHO05D008372 1.5e-57 227.3 196 57.7
Cfa015167 Carpinus fangiana HOM05D006659 ORTHO05D008372 1.5e-57 227.3 182 62.1
Potri.017G030100 Populus trichocarpa HOM05D006659 ORTHO05D008372 1.5e-57 227.3 276 60.1
PSO017G5731 Papaver somniferum HOM05D006659 ORTHO05D008372 2.5e-57 226.5 193 58.5
A07p24640 Brassica napus HOM05D006659 ORTHO05D008372 5.6e-57 225.3 190 60.5
BraA07t30109Z Brassica rapa HOM05D006659 ORTHO05D008372 5.6e-57 225.3 190 60.5
Aa31LG10G13750 Aethionema arabicum HOM05D006659 ORTHO05D008372 1.2e-56 224.2 195 59.0
HanXRQChr01g0004971 Helianthus annuus HOM05D006659 ORTHO05D008372 1.2e-56 224.2 192 58.9
BraA09t40604Z Brassica rapa HOM05D006659 ORTHO05D008372 1.6e-56 223.8 190 61.1
BcaB02g07470 Brassica carinata HOM05D006659 ORTHO05D008372 2.1e-56 223.4 190 60.5
A09p51640 Brassica napus HOM05D006659 ORTHO05D008372 2.1e-56 223.4 190 60.5
BolC6t37777H Brassica oleracea HOM05D006659 ORTHO05D008372 2.1e-56 223.4 190 59.5
MD04G1040300 Malus domestica HOM05D006659 ORTHO05D008372 2.1e-56 223.4 198 59.6
BcaC08g44982 Brassica carinata HOM05D006659 ORTHO05D008372 2.8e-56 223.0 190 58.9
Aqoxy2G04093 Aquilegia oxysepala HOM05D006659 ORTHO05D008372 3.6e-56 222.6 192 58.3
C06p26120 Brassica napus HOM05D006659 ORTHO05D008372 3.6e-56 222.6 190 59.5
BcaC07g40279 Brassica carinata HOM05D006659 ORTHO05D008372 4.7e-56 222.2 190 59.5
C08p34410 Brassica napus HOM05D006659 ORTHO05D008372 4.7e-56 222.2 190 59.5
BolC8t51042H Brassica oleracea HOM05D006659 ORTHO05D008372 4.7e-56 222.2 190 59.5
unitig_578.g16263 Utricularia gibba HOM05D006659 ORTHO05D008372 4.7e-56 222.2 193 58.0
Thhalv10006183m.g Eutrema salsugineum HOM05D006659 ORTHO05D008372 6.2e-56 221.9 190 58.4
RcHm_v2.0_Chr4g0406801 Rosa chinensis HOM05D006659 ORTHO05D008372 1.1e-55 221.1 199 60.3
Sed0004224 Sechium edule HOM05D006659 ORTHO05D008372 1.4e-55 220.7 192 57.3
Oeu053837.1 Olea europaea HOM05D006659 ORTHO05D008372 1.8e-55 220.3 195 55.9
PGSC0003DMG400027013 Solanum tuberosum HOM05D006659 ORTHO05D008372 1.8e-55 220.3 197 59.4
Sp5g03740 Schrenkiella parvula HOM05D006659 ORTHO05D008372 2.4e-55 219.9 190 58.4
Sopen06g029650 Solanum pennellii HOM05D006659 ORTHO05D008372 2.4e-55 219.9 195 59.0
SalBow6G0037 Salvia bowleyana HOM05D006659 ORTHO05D008372 5.2e-55 218.8 151 67.5
Sed0027988 Sechium edule HOM05D006659 ORTHO05D008372 5.2e-55 218.8 194 59.3
Ciclev10021505m.g Citrus clementina HOM05D006659 ORTHO05D008372 9.0e-55 218.0 192 56.8
Nitab4.5_0008969g0010 Nicotiana tabacum HOM05D006659 ORTHO05D008372 9.0e-55 218.0 237 55.3
Lj6C54T1 Lonicera japonica HOM05D006659 ORTHO05D008372 1.2e-54 217.6 167 63.5
Solyc06g073290.1 Solanum lycopersicum HOM05D006659 ORTHO05D008372 1.2e-54 217.6 195 59.0
CAN.G65.172 Capsicum annuum HOM05D006659 ORTHO05D008372 1.5e-54 217.2 197 57.9
FvH4_4g10790 Fragaria vesca HOM05D006659 ORTHO05D008372 2.0e-54 216.9 150 68.0
FAN12G1956 Fragaria x ananassa HOM05D006659 ORTHO05D008372 2.0e-54 216.9 150 68.0
SGA_v2.0_scaffold31G12575 Striga asiatica HOM05D006659 ORTHO05D008372 5.8e-54 215.3 157 67.5
CARHR169790 Cardamine hirsuta HOM05D006659 ORTHO05D008372 1.3e-53 214.2 190 58.4
FAN07G0020 Fragaria x ananassa HOM05D006659 ORTHO05D008372 1.3e-53 214.2 150 67.3
Carub.0005s2614 Capsella rubella HOM05D006659 ORTHO05D008372 3.8e-53 212.6 190 56.3
EL10Ac3g05931 Beta vulgaris HOM05D006659 ORTHO05D008372 4.9e-53 212.2 206 56.3
AUR62015391 Chenopodium quinoa HOM05D006283 ORTHO05D007727 1.1e-52 211.1 209 55.0
AL5G41300 Arabidopsis lyrata HOM05D006659 ORTHO05D008372 1.9e-52 210.3 196 56.1
AT3G59400 Arabidopsis thaliana HOM05D006659 ORTHO05D008372 4.2e-52 209.1 190 55.8
Migut.N03108 Erythranthe guttata HOM05D006659 ORTHO05D008372 9.3e-52 208.0 193 55.4
Manes.04G042918 Manihot esculenta HOM05D006659 ORTHO05D008372 5.1e-50 202.2 195 54.9
Glyma.11G127800 Glycine max HOM05D006659 ORTHO05D008372 1.1e-47 194.5 259 45.2
SEGI_36451 Sequoiadendron giganteum HOM05D006659 ORTHO05D008372 9.0e-47 191.4 154 57.8
CDE04G1206 Ceratophyllum demersum HOM05D006659 ORTHO05D008372 9.6e-41 171.4 148 56.8
AagrBONN_evm.TU.Sc2ySwM_228.5135 Anthoceros agrestis HOM05D006659 ORTHO05D008372 6.2e-40 168.7 159 50.9
Pp3c6_11210 Physcomitrium patens HOM05D006659 ORTHO05D008372 1.2e-38 164.5 151 52.3
Pp3c25_4400 Physcomitrium patens HOM05D006659 ORTHO05D008372 2.0e-38 163.7 151 52.3
SMO170G0079 Selaginella moellendorffii HOM05D006659 ORTHO05D008372 7.6e-38 161.8 168 48.8
Mapoly0173s0019 Marchantia polymorpha HOM05D006659 ORTHO05D008372 8.4e-37 158.3 179 46.4
Peaxi162Scf00413g00827 Petunia axillaris HOM05D006659 ORTHO05D008372 1.1e-36 157.9 185 49.7
VMungo1309G1939 Vigna mungo HOM05D006659 ORTHO05D008372 1.6e-35 154.1 192 43.8
CBR_g10809 Chara braunii HOM05D006659 ORTHO05D008372 2.1e-32 143.7 160 45.0
Cre05.g246800 Chlamydomonas reinhardtii HOM05D006659 ORTHO05D008372 6.9e-31 138.7 158 45.6
MCO04G521 Micromonas commoda HOM05D006659 ORTHO05D008372 1.2e-27 127.9 179 39.1
PRCOL_00006170 Prasinoderma coloniale HOM05D006659 ORTHO05D008372 2.7e-27 126.7 161 41.6
Oeu053835.1 Olea europaea HOM05D006659 ORTHO05D008372 3.0e-26 123.2 115 55.7
Eucgr.H00371 Eucalyptus grandis HOM05D006659 ORTHO05D008372 3.1e-23 113.2 110 57.3


User provided reference genes

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