Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0264200 Oryza sativa ssp. japonica HOM05D005998 ORTHO05D007664 3.2e-151 538.9 382 100.0
Zm00001eb112540 Zea mays HOM05D005998 ORTHO05D007664 2.9e-80 303.1 379 68.9
Zm00001eb182340 Zea mays HOM05D005998 ORTHO05D015715 3.2e-58 229.9 187 58.8
HPP92_024394 Vanilla planifolia HOM05D005998 ORTHO05D007664 3.5e-57 226.5 322 53.1
Lj2A1109T75 Lonicera japonica HOM05D005998 ORTHO05D007664 2.8e-54 216.9 375 42.4
Sc05g0001600 Simmondsia chinensis HOM05D005998 ORTHO05D007664 3.2e-50 203.4 374 37.7
HanXRQChr10g0281201 Helianthus annuus HOM05D005998 ORTHO05D007664 3.5e-49 199.9 380 36.1
TWI75G0247 Tripterygium wilfordii HOM05D005998 ORTHO05D007664 3.9e-48 196.4 369 47.4
ECA236G1847 Erigeron canadensis HOM05D005998 ORTHO05D007664 7.3e-47 192.2 370 31.9
CAN.G181.48 Capsicum annuum HOM05D005998 ORTHO05D007664 8.1e-46 188.7 380 40.8
PSO573G0042 Papaver somniferum HOM05D005998 ORTHO05D007664 2.4e-42 177.2 328 47.3
PSO573G0021 Papaver somniferum HOM05D005998 ORTHO05D007664 6.0e-41 172.6 297 42.4
Zm00001eb048880 Zea mays HOM05D005998 ORTHO05D015715 7.9e-41 172.2 111 70.3
PSO573G0007 Papaver somniferum HOM05D005998 ORTHO05D007664 6.6e-40 169.1 347 53.3
Lsat_1_v5_gn_8_98580 Lactuca sativa HOM05D005998 ORTHO05D007664 1.5e-39 167.9 368 42.4
RcHm_v2.0_Chr6g0281791 Rosa chinensis HOM05D005998 ORTHO05D007664 2.5e-39 167.2 286 49.3
PSO017G2023 Papaver somniferum HOM05D005998 ORTHO05D007664 4.3e-39 166.4 301 48.5
AT3G07550 Arabidopsis thaliana HOM05D005998 ORTHO05D007664 1.3e-38 164.9 297 43.1
BcaC05g29549 Brassica carinata HOM05D005998 ORTHO05D007664 1.1e-37 161.8 299 47.8
PSO017G6055 Papaver somniferum HOM05D005998 ORTHO05D007664 1.4e-37 161.4 347 52.2
Ciclev10015543m.g Citrus clementina HOM05D005998 ORTHO05D007664 4.0e-37 159.8 284 48.2
Sp3g06470 Schrenkiella parvula HOM05D005998 ORTHO05D007664 6.9e-37 159.1 293 42.3
PGR083G1807 Punica granatum HOM05D005998 ORTHO05D007664 2.6e-36 157.1 283 44.2
AL3G18890 Arabidopsis lyrata HOM05D005998 ORTHO05D007664 3.4e-36 156.8 295 43.1
Cfa010674 Carpinus fangiana HOM05D005998 ORTHO05D007664 3.4e-36 156.8 183 41.5
QL09p045684 Quercus lobata HOM05D005998 ORTHO05D007664 7.6e-36 155.6 291 40.2
CANSAT25G0419 Cannabis sativa HOM05D005998 ORTHO05D007664 1.3e-35 154.8 288 41.7
BraA05t22797Z Brassica rapa HOM05D005998 ORTHO05D007664 6.4e-35 152.5 293 32.8
Atru.chr6.3489 Acer truncatum HOM05D005998 ORTHO05D007664 8.4e-35 152.1 284 46.1
Migut.N00691 Erythranthe guttata HOM05D005998 ORTHO05D007664 1.1e-34 151.8 374 35.8
Prupe.8G184400 Prunus persica HOM05D005998 ORTHO05D007664 1.4e-34 151.4 287 42.2
Thhalv10020882m.g Eutrema salsugineum HOM05D005998 ORTHO05D007664 2.4e-34 150.6 295 41.0
TAR362G0769 Trochodendron aralioides HOM05D005998 ORTHO05D007664 1.2e-33 148.3 295 45.8
BolC5t34631H Brassica oleracea HOM05D005998 ORTHO05D007664 1.6e-33 147.9 297 46.8
Carub.0003s0710 Capsella rubella HOM05D005998 ORTHO05D007664 1.6e-33 147.9 296 41.9
Actinidia23131 Actinidia chinensis HOM05D005998 ORTHO05D007664 6.0e-33 146.0 290 41.7
C05p59770 Brassica napus HOM05D005998 ORTHO05D007664 6.0e-33 146.0 287 47.4
MD05G1151800 Malus domestica HOM05D005998 ORTHO05D007664 6.0e-33 146.0 291 43.0
Manes.13G057500 Manihot esculenta HOM05D005998 ORTHO05D007664 7.9e-33 145.6 284 48.2
EL10Ac5g10571 Beta vulgaris HOM05D005998 ORTHO05D007664 1.0e-32 145.2 281 36.3
Peaxi162Scf00372g00061 Petunia axillaris HOM05D005998 ORTHO05D007664 1.0e-32 145.2 383 40.7
SEGI_17775 Sequoiadendron giganteum HOM05D005998 ORTHO05D007664 1.0e-32 145.2 295 42.4
Thecc.01G205300 Theobroma cacao HOM05D005998 ORTHO05D007664 1.0e-32 145.2 291 41.2
Eucgr.H00683 Eucalyptus grandis HOM05D005998 ORTHO05D007664 1.8e-32 144.4 284 46.1
Cc02_g30680 Coffea canephora HOM05D005998 ORTHO05D007664 2.3e-32 144.1 302 41.4
A05p40660 Brassica napus HOM05D005998 ORTHO05D007664 3.9e-32 143.3 293 31.7
Gohir.A11G144800 Gossypium hirsutum HOM05D005998 ORTHO05D007664 3.9e-32 143.3 287 40.1
PGSC0003DMG400020641 Solanum tuberosum HOM05D005998 ORTHO05D007664 3.9e-32 143.3 312 40.1
BcaC05g29548 Brassica carinata HOM05D005998 ORTHO05D007664 5.1e-32 142.9 294 40.1
THA.LOC104819025 Tarenaya hassleriana HOM05D005998 ORTHO05D007664 5.1e-32 142.9 295 41.4
Gohir.D11G153100 Gossypium hirsutum HOM05D005998 ORTHO05D007664 8.7e-32 142.1 287 40.1
Gorai.007G162000 Gossypium raimondii HOM05D005998 ORTHO05D007664 8.7e-32 142.1 287 40.1
Aa31LG5G18090 Aethionema arabicum HOM05D005998 ORTHO05D007664 1.1e-31 141.7 292 40.8
COL.COLO4_29925 Corchorus olitorius HOM05D005998 ORTHO05D007664 3.3e-31 140.2 288 41.0
Hma1.2p1_1756F.1_g301020 Hydrangea macrophylla HOM05D005998 ORTHO05D007664 4.3e-31 139.8 320 38.8
Lj3g0009731 Lotus japonicus HOM05D005998 ORTHO05D007664 5.6e-31 139.4 296 54.7
Nitab4.5_0003952g0080 Nicotiana tabacum HOM05D005998 ORTHO05D007664 5.6e-31 139.4 371 41.0
FvH4_2g17281 Fragaria vesca HOM05D005998 ORTHO05D007664 1.6e-30 137.9 286 47.9
Nitab4.5_0002641g0010 Nicotiana tabacum HOM05D005998 ORTHO05D007664 2.8e-30 137.1 380 40.0
Dinv28780 Davidia involucrata HOM05D005998 ORTHO05D003775 4.8e-30 136.3 181 50.3
PSO017G3521 Papaver somniferum HOM05D005998 ORTHO05D007664 1.8e-29 134.4 317 38.2
Solyc06g007680.1 Solanum lycopersicum HOM05D005998 ORTHO05D007664 2.4e-29 134.0 383 38.6
Medtr8g028140 Medicago truncatula HOM05D005998 ORTHO05D007664 9.0e-29 132.1 291 56.7
CDE08G0319 Ceratophyllum demersum HOM05D005998 ORTHO05D007664 1.2e-28 131.7 107 57.9
Sopen06g002580 Solanum pennellii HOM05D005998 ORTHO05D007664 1.2e-28 131.7 383 38.4
RcHm_v2.0_Chr5g0064201 Rosa chinensis HOM05D005998 ORTHO05D007664 2.0e-28 131.0 180 43.9
Glyma.07G060100 Glycine max HOM05D005998 ORTHO05D007664 3.4e-28 130.2 287 55.4
Lsat_1_v5_gn_4_46380 Lactuca sativa HOM05D005998 ORTHO05D007664 4.5e-28 129.8 300 45.0
CSS0043446 Camellia sinensis var. sinensis HOM05D005998 ORTHO05D007664 6.5e-27 125.9 267 40.8
Ca_23566_v3 Cicer arietinum L. HOM05D005998 ORTHO05D007664 1.9e-26 124.4 286 55.9
DCAR_000509 Daucus carota HOM05D005998 ORTHO05D007664 2.5e-26 124.0 104 51.0
Cpa.g.sc8.24 Carica papaya HOM05D005998 ORTHO05D007664 5.5e-26 122.9 287 39.0
Psat4g158400 Pisum sativum HOM05D005998 ORTHO05D007664 9.3e-26 122.1 285 55.8
PSO675G7594 Papaver somniferum HOM05D005998 ORTHO05D007664 1.6e-25 121.3 306 37.6
AUR62008051 Chenopodium quinoa HOM05D005998 ORTHO05D007664 4.6e-25 119.8 277 41.2
RcHm_v2.0_Chr7g0205731 Rosa chinensis HOM05D005998 ORTHO05D007664 4.6e-25 119.8 98 55.1
TPR.G5126 Trifolium pratense HOM05D005998 ORTHO05D007664 1.0e-24 118.6 288 54.9
Potri.017G056400 Populus trichocarpa HOM05D005998 ORTHO05D007664 1.8e-24 117.9 291 43.6
ATR0743G036 Amborella trichopoda HOM05D005998 ORTHO05D007664 6.7e-24 115.9 264 48.5
CARHR082230 Cardamine hirsuta HOM05D005998 ORTHO05D007664 1.1e-23 115.2 289 37.7
Nn1g09548 Nelumbo nucifera HOM05D005998 ORTHO05D007664 2.1e-22 110.9 255 48.6
Haze_03601 Corylus avellana HOM05D005998 ORTHO05D007664 4.8e-22 109.8 304 36.2
AUR62028626 Chenopodium quinoa HOM05D005998 ORTHO05D007664 6.3e-22 109.4 281 39.9
Sabra17G0050000 Salix brachista HOM05D005998 ORTHO05D007664 6.3e-22 109.4 285 43.2
HanXRQChr08g0231281 Helianthus annuus HOM05D005998 ORTHO05D007664 1.4e-21 108.2 299 35.8
PSO017G0196 Papaver somniferum HOM05D005998 ORTHO05D007664 3.1e-21 107.1 295 34.6
HanXRQChr08g0231291 Helianthus annuus HOM05D005998 ORTHO05D007664 1.5e-20 104.8 288 37.8
HanXRQChr08g0231301 Helianthus annuus HOM05D005998 ORTHO05D007664 1.5e-20 104.8 288 37.8
ECA247G2512 Erigeron canadensis HOM05D005998 ORTHO05D007664 4.5e-20 103.2 331 26.3
Sabra17G0048300 Salix brachista HOM05D005998 ORTHO05D007664 1.3e-19 101.7 286 42.0
Duzib138G0171 Durio zibethinus HOM05D005998 ORTHO05D007664 1.7e-19 101.3 99 47.5
PSO541G0922 Papaver somniferum HOM05D005998 ORTHO05D007664 2.5e-18 97.4 126 41.3
Duzib211G0440 Durio zibethinus HOM05D005998 ORTHO05D007664 3.2e-18 97.1 217 47.9
PSO017G7319 Papaver somniferum HOM05D005998 ORTHO05D007664 4.2e-18 96.7 126 38.1
ECA247G3549 Erigeron canadensis HOM05D005998 ORTHO05D007664 7.2e-18 95.9 115 40.9
PSO541G3130 Papaver somniferum HOM05D005998 ORTHO05D007664 1.0e-16 92.0 324 33.3
ECA247G3308 Erigeron canadensis HOM05D005998 ORTHO05D007664 2.3e-16 90.9 288 37.8
MD10G1146000 Malus domestica HOM05D005998 ORTHO05D007664 2.3e-16 90.9 272 47.1
ECA232G4734 Erigeron canadensis HOM05D005998 ORTHO05D007664 1.1e-15 88.6 311 37.0
PSO017G0268 Papaver somniferum HOM05D005998 ORTHO05D007664 5.7e-15 86.3 126 34.9
Zm00001eb169070 Zea mays HOM05D005998 ORTHO05D007664 3.7e-14 83.6 50 68.0
PSO017G0278 Papaver somniferum HOM05D000500 ORTHO05D007664 4.8e-14 83.2 126 34.9
Zm00001eb293000 Zea mays HOM05D000001 ORTHO05D015715 4.8e-14 83.2 47 74.5
ECA247G1593 Erigeron canadensis HOM05D005998 ORTHO05D007664 6.3e-14 82.8 130 33.8
ECA247G1907 Erigeron canadensis HOM05D005998 ORTHO05D007664 1.8e-13 81.3 117 35.9
ECA247G1983 Erigeron canadensis HOM05D005998 ORTHO05D007664 3.1e-13 80.5 320 24.4
ECA247G2923 Erigeron canadensis HOM05D005998 ORTHO05D003386 2.0e-12 77.8 102 37.3
PSO837G0015 Papaver somniferum HOM05D005998 ORTHO05D007664 1.3e-11 75.1 107 37.4
Mapoly0166s0007 Marchantia polymorpha HOM05D005998 ORTHO05D007664 1.7e-11 74.7 272 40.1
Rhsim13G0055600 Rhododendron simsii HOM05D005998 ORTHO05D007664 6.5e-11 72.8 79 43.0
PSO017G5922 Papaver somniferum HOM05D005998 ORTHO05D007664 1.4e-10 71.6 107 32.7
Oeu064702.2 Olea europaea HOM05D005998 ORTHO05D007664 4.2e-10 70.1 47 55.3
PSO017G3446 Papaver somniferum HOM05D005998 ORTHO05D007664 4.2e-10 70.1 128 32.8
PSO675G8174 Papaver somniferum HOM05D005998 ORTHO05D007664 3.6e-09 67.0 297 31.0
PSO675G5104 Papaver somniferum HOM05D005998 ORTHO05D007664 1.4e-08 65.1 119 33.6
Hma1.2p1_2354F.1_g320530 Hydrangea macrophylla HOM05D005998 ORTHO05D007664 1.8e-08 64.7 43 62.8
PSO017G4719 Papaver somniferum HOM05D005998 ORTHO05D007664 1.8e-08 64.7 126 31.0
PSO218G0001 Papaver somniferum HOM05D005998 ORTHO05D007664 1.8e-08 64.7 294 32.0
PSO340G0001 Papaver somniferum HOM05D005998 ORTHO05D007664 1.8e-08 64.7 294 32.0
PSO675G6053 Papaver somniferum HOM05D005998 ORTHO05D007664 1.8e-08 64.7 294 32.0
PSO675G6885 Papaver somniferum HOM05D005998 ORTHO05D007664 1.8e-08 64.7 294 32.0
PSO017G5443 Papaver somniferum HOM05D005998 ORTHO05D007664 8.8e-08 62.4 237 34.2
PSO837G0002 Papaver somniferum HOM05D005998 ORTHO05D007664 1.5e-07 61.6 107 35.5
PSO017G6716 Papaver somniferum HOM05D005998 ORTHO05D007664 4.3e-07 60.1 117 33.3
Eucgr.H00682 Eucalyptus grandis HOM05D005998 ORTHO05D007664 7.4e-07 59.3 50 48.0
PSO170G1012 Papaver somniferum HOM05D005998 ORTHO05D007664 7.4e-07 59.3 107 33.6
PSO837G0060 Papaver somniferum HOM05D005998 ORTHO05D007664 9.7e-07 58.9 290 30.3


User provided reference genes

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