Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0249300 Oryza sativa ssp. japonica HOM05D007047 ORTHO05D009177 1.8e-232 808.9 411 100.0
Zm00001eb428340 Zea mays HOM05D007047 ORTHO05D009177 7.4e-53 212.2 425 37.9
arahy.Tifrunner.gnm1.ann1.J4EMKX Arachis hypogaea HOM05D007047 ORTHO05D009177 1.8e-11 74.7 422 24.2
arahy.Tifrunner.gnm1.ann1.XH35PM Arachis hypogaea HOM05D007047 ORTHO05D009177 1.8e-11 74.7 422 24.2
CiPaw.12G048400 Carya illinoinensis HOM05D007047 ORTHO05D009177 2.0e-10 71.2 408 24.0
GSVIVG01004793001 Vitis vinifera HOM05D000549 ORTHO05D006202 4.5e-10 70.1 414 24.6
Migut.A01028 Erythranthe guttata HOM05D007047 ORTHO05D009177 2.2e-09 67.8 421 23.3
Nn6g33825 Nelumbo nucifera HOM05D007047 ORTHO05D009177 2.2e-09 67.8 398 23.9
Rhsim07G0117200 Rhododendron simsii HOM05D007047 ORTHO05D009177 2.9e-09 67.4 423 24.6
Lalb_Chr16g0379431 Lupinus albus HOM05D007047 ORTHO05D009177 1.1e-08 65.5 415 24.1
Carub.0007s2455 Capsella rubella HOM05D007047 ORTHO05D009177 2.5e-08 64.3 446 24.4
TPR.G17974 Trifolium pratense HOM05D007047 ORTHO05D009177 2.5e-08 64.3 408 24.8
CSS0008245 Camellia sinensis var. sinensis HOM05D007047 ORTHO05D009177 4.2e-08 63.5 446 22.4
Gorai.004G194800 Gossypium raimondii HOM05D007047 ORTHO05D009177 4.2e-08 63.5 416 26.4
COL.COLO4_10022 Corchorus olitorius HOM05D007047 ORTHO05D009177 7.2e-08 62.8 428 25.2
Gohir.A08G166600 Gossypium hirsutum HOM05D007047 ORTHO05D009177 1.2e-07 62.0 414 27.5
Actinidia31505 Actinidia chinensis HOM05D007047 ORTHO05D006202 1.6e-07 61.6 422 23.9
Ciclev10024423m.g Citrus clementina HOM05D007047 ORTHO05D009177 2.7e-07 60.8 405 24.2
VMungo1215G0554 Vigna mungo HOM05D002164 ORTHO05D002267 2.7e-07 60.8 428 22.7
CAN.G62.14 Capsicum annuum HOM05D007047 ORTHO05D009177 3.6e-07 60.5 410 22.7
Haze_07962 Corylus avellana HOM05D007047 ORTHO05D009177 3.6e-07 60.5 390 24.9
Sp7g17290 Schrenkiella parvula HOM05D007047 ORTHO05D009177 3.6e-07 60.5 414 22.5
Thecc.03G244500 Theobroma cacao HOM05D007047 ORTHO05D009177 3.6e-07 60.5 132 37.9
Aqoxy3G02722 Aquilegia oxysepala HOM05D007047 ORTHO05D009177 4.7e-07 60.1 115 35.7
Oeu045675.1 Olea europaea HOM05D007047 ORTHO05D009177 4.7e-07 60.1 403 24.3
MELO3C013912.2 Cucumis melo HOM05D007047 ORTHO05D009177 6.1e-07 59.7 438 24.0
Eucgr.D02116 Eucalyptus grandis HOM05D007047 ORTHO05D009177 6.1e-07 59.7 388 21.9
AL7G37840 Arabidopsis lyrata HOM05D007047 ORTHO05D009177 8.0e-07 59.3 452 23.2
Nitab4.5_0006375g0010 Nicotiana tabacum HOM05D007047 ORTHO05D009177 8.0e-07 59.3 407 21.9
Peaxi162Scf00190g01213 Petunia axillaris HOM05D007047 ORTHO05D009177 8.0e-07 59.3 52 53.8
Prupe.4G179300 Prunus persica HOM05D007047 ORTHO05D009177 8.0e-07 59.3 107 38.3
unitig_744.g24476 Utricularia gibba HOM05D007047 ORTHO05D009177 8.0e-07 59.3 53 56.6
FvH4_2g33151 Fragaria vesca HOM05D007047 ORTHO05D009177 1.0e-06 58.9 123 35.0
Lsat_1_v5_gn_4_126100 Lactuca sativa HOM05D007047 ORTHO05D009177 1.0e-06 58.9 183 30.1
Nitab4.5_0000506g0030 Nicotiana tabacum HOM05D007047 ORTHO05D009177 1.0e-06 58.9 400 22.2
SalBow6G1440 Salvia bowleyana HOM05D007047 ORTHO05D009177 1.0e-06 58.9 428 22.9
TAR375G0331 Trochodendron aralioides HOM05D007047 ORTHO05D009177 1.0e-06 58.9 409 25.4
HPP92_022107 Vanilla planifolia HOM05D007047 ORTHO05D009177 1.0e-06 58.9 133 35.3
Cc08_g11870 Coffea canephora HOM05D000549 ORTHO05D006202 1.4e-06 58.5 122 35.2
FAN24G2075 Fragaria x ananassa HOM05D007047 ORTHO05D009177 1.4e-06 58.5 123 33.3
PGR031G1177 Punica granatum HOM05D007047 ORTHO05D009177 1.4e-06 58.5 425 20.7
Sed0008627 Sechium edule HOM05D007047 ORTHO05D009177 1.4e-06 58.5 396 23.5
PGSC0003DMG400024159 Solanum tuberosum HOM05D007047 ORTHO05D009177 1.4e-06 58.5 416 24.3
Dinv39189 Davidia involucrata HOM05D000549 ORTHO05D006202 1.8e-06 58.2 113 31.9
MD06G1050900 Malus domestica HOM05D007047 ORTHO05D009177 1.8e-06 58.2 139 36.0
Oeu045687.1 Olea europaea HOM05D007047 ORTHO05D009177 1.8e-06 58.2 404 24.8
ECA240G0572 Erigeron canadensis HOM05D007047 ORTHO05D009177 2.3e-06 57.8 100 37.0
FAN20G0731 Fragaria x ananassa HOM05D007047 ORTHO05D009177 2.3e-06 57.8 229 26.6
HanXRQChr11g0329491 Helianthus annuus HOM05D007047 ORTHO05D009177 3.0e-06 57.4 58 46.6
FAN08G2081 Fragaria x ananassa HOM05D007047 ORTHO05D009177 4.0e-06 57.0 440 24.1
FAN27G3081 Fragaria x ananassa HOM05D007047 ORTHO05D009177 4.0e-06 57.0 112 34.8
Hma1.2p1_0821F.1_g224180 Hydrangea macrophylla HOM05D007047 ORTHO05D009177 4.0e-06 57.0 459 23.3
Lj2g0019775 Lotus japonicus HOM05D007047 ORTHO05D009177 4.0e-06 57.0 54 50.0
CsaV3_3G002430 Cucumis sativus L. HOM05D007047 ORTHO05D009177 5.2e-06 56.6 436 23.2
DCAR_000643 Daucus carota HOM05D007047 ORTHO05D009177 5.2e-06 56.6 116 33.6


User provided reference genes

Program Settings