Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0245800 Oryza sativa ssp. japonica HOM05D000009 ORTHO05D012224 3.1e-187 658.3 325 100.0
Os01g0781200 Oryza sativa ssp. japonica HOM05D000009 ORTHO05D012224 4.0e-70 269.2 279 51.6
Os01g0781700 Oryza sativa ssp. japonica HOM05D000009 ORTHO05D012224 1.2e-69 267.7 279 51.3
Os01g0782100 Oryza sativa ssp. japonica HOM05D000009 ORTHO05D012224 9.9e-69 264.6 279 49.8
Zm00001eb405960 Zea mays HOM05D000009 ORTHO05D012224 3.6e-63 246.1 281 47.7
Zm00001eb441980 Zea mays HOM05D000009 ORTHO05D012224 3.6e-63 246.1 281 47.7
Zm00001eb405860 Zea mays HOM05D000009 ORTHO05D012224 5.3e-62 242.3 279 45.9
Os01g0781100 Oryza sativa ssp. japonica HOM05D000009 ORTHO05D012224 6.9e-62 241.9 273 47.6
Zm00001eb405880 Zea mays HOM05D000009 ORTHO05D012224 2.4e-59 233.4 279 45.9
Zm00001eb405980 Zea mays HOM05D000009 ORTHO05D012224 2.1e-58 230.3 279 46.2
Zm00001eb405870 Zea mays HOM05D000009 ORTHO05D012224 6.2e-55 218.8 277 44.4
Zm00001eb405940 Zea mays HOM05D000009 ORTHO05D012224 4.0e-54 216.1 277 44.0
Os11g0555300 Oryza sativa ssp. japonica HOM05D000009 ORTHO05D012224 1.2e-42 177.9 207 48.3
Hma1.2p1_1604F.1_g293230 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 3.7e-15 86.7 304 30.6
Zm00001eb405910 Zea mays HOM05D000009 ORTHO05D012224 3.2e-11 73.6 71 53.5
Hma1.2p1_1604F.1_g293260 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 4.7e-10 69.7 273 27.5
GSVIVG01037447001 Vitis vinifera HOM05D000009 ORTHO05D000008 1.8e-09 67.8 300 25.3
VMungo0464G1745 Vigna mungo HOM05D000009 ORTHO05D000008 4.0e-09 66.6 310 25.2
Ca_14029_v3 Cicer arietinum L. HOM05D000009 ORTHO05D000008 5.7e-08 62.8 305 25.9
Duzib106G1387 Durio zibethinus HOM05D000009 ORTHO05D000008 5.7e-08 62.8 322 24.8
Os04g0378575 Oryza sativa ssp. japonica HOM05D000009 ORTHO05D016370 7.5e-08 62.4 287 24.0
Lsat_1_v5_gn_2_27321 Lactuca sativa HOM05D000009 ORTHO05D000008 1.3e-07 61.6 241 25.7
QL10p044564 Quercus lobata HOM05D000009 ORTHO05D000008 2.8e-07 60.5 276 25.4
Eucgr.K01864 Eucalyptus grandis HOM05D000009 ORTHO05D000008 4.8e-07 59.7 212 29.7
Lj3g0007540 Lotus japonicus HOM05D000009 ORTHO05D000008 4.8e-07 59.7 251 25.9
Atru.chr10.2007 Acer truncatum HOM05D000009 ORTHO05D000008 6.3e-07 59.3 290 26.9
CiPaw.13G006100 Carya illinoinensis HOM05D000009 ORTHO05D000008 6.3e-07 59.3 306 24.5
Ah.04g150470 Amaranthus hybridus HOM05D000009 ORTHO05D000008 1.1e-06 58.5 79 32.9
Phvul.004G008909 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 1.1e-06 58.5 205 26.3
Phvul.004G008921 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 1.4e-06 58.2 205 26.8
VMungo0464G0718 Vigna mungo HOM05D000009 ORTHO05D000008 1.4e-06 58.2 334 26.0
arahy.Tifrunner.gnm1.ann1.KJ4UT7 Arachis hypogaea HOM05D000009 ORTHO05D000008 1.8e-06 57.8 290 27.6
Cc00_g28300 Coffea canephora HOM05D000009 ORTHO05D004635 1.8e-06 57.8 279 26.5
Glyma.13G194500 Glycine max HOM05D000009 ORTHO05D000008 1.8e-06 57.8 289 27.7
Phvul.004G015666 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 2.4e-06 57.4 226 29.2
VMungo1127G0710 Vigna mungo HOM05D000009 ORTHO05D000008 3.1e-06 57.0 243 24.3
Dinv03128 Davidia involucrata HOM05D000009 ORTHO05D000008 4.1e-06 56.6 363 25.3
Phvul.004G008918 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 4.1e-06 56.6 259 23.9
Hma1.2p1_0251F.1_g102550 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 7.0e-06 55.8 259 25.9
Hma1.2p1_0251F.1_g102553 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 7.0e-06 55.8 259 25.9
Medtr0005s0110 Medicago truncatula HOM05D000005 ORTHO05D000012 7.0e-06 55.8 268 24.3
Medtr4g043630 Medicago truncatula HOM05D000005 ORTHO05D000012 7.0e-06 55.8 268 24.3
Rhsim07G0127700 Rhododendron simsii HOM05D000009 ORTHO05D000008 9.1e-06 55.5 297 24.9
TPR.G39301 Trifolium pratense HOM05D000005 ORTHO05D000012 9.1e-06 55.5 252 26.6


User provided reference genes

Program Settings