Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0245500 Oryza sativa ssp. japonica HOM05D007630 ORTHO05D009637 3.3e-142 508.4 271 100.0
Glyma.07G270900 Glycine max HOM05D007630 ORTHO05D009637 1.4e-76 290.4 259 62.9
Peaxi162Scf00194g00929 Petunia axillaris HOM05D007630 ORTHO05D009637 1.4e-76 290.4 258 61.2
Phvul.003G090300 Phaseolus vulgaris HOM05D007630 ORTHO05D009637 3.1e-76 289.3 246 65.9
Glyma.17G003000 Glycine max HOM05D007630 ORTHO05D009637 9.1e-76 287.7 259 62.9
TPR.G5932 Trifolium pratense HOM05D007630 ORTHO05D009637 1.2e-75 287.3 251 64.5
CAN.G1379.16 Capsicum annuum HOM05D007630 ORTHO05D009637 2.0e-75 286.6 251 63.7
Solyc01g102720.3 Solanum lycopersicum HOM05D007630 ORTHO05D009637 2.6e-75 286.2 251 62.2
Sopen01g045140 Solanum pennellii HOM05D007630 ORTHO05D009637 2.6e-75 286.2 251 62.5
PGSC0003DMG400018220 Solanum tuberosum HOM05D007630 ORTHO05D009637 2.6e-75 286.2 251 62.5
Nn5g27111 Nelumbo nucifera HOM05D007630 ORTHO05D009637 4.5e-75 285.4 249 63.9
Nitab4.5_0001085g0080 Nicotiana tabacum HOM05D007630 ORTHO05D009637 4.5e-75 285.4 257 62.6
Hma1.2p1_0157F.1_g069300 Hydrangea macrophylla HOM05D007630 ORTHO05D009637 5.9e-75 285.0 247 64.0
RcHm_v2.0_Chr7g0218271 Rosa chinensis HOM05D007630 ORTHO05D009637 5.9e-75 285.0 249 65.5
FvH4_5g27180 Fragaria vesca HOM05D007630 ORTHO05D009637 1.0e-74 284.3 249 65.5
Nitab4.5_0006947g0030 Nicotiana tabacum HOM05D007630 ORTHO05D009637 1.3e-74 283.9 249 62.7
Potri.004G231000 Populus trichocarpa HOM05D007630 ORTHO05D009637 1.3e-74 283.9 246 62.6
Cc02_g23840 Coffea canephora HOM05D007630 ORTHO05D009637 1.7e-74 283.5 247 64.0
Medtr4g134400 Medicago truncatula HOM05D007630 ORTHO05D009637 1.7e-74 283.5 246 64.2
Sabra01G0176100 Salix brachista HOM05D007630 ORTHO05D009637 2.2e-74 283.1 245 62.9
Lj4g0008184 Lotus japonicus HOM05D007630 ORTHO05D009637 2.9e-74 282.7 245 64.1
QL02p103828 Quercus lobata HOM05D007630 ORTHO05D009637 2.9e-74 282.7 250 63.6
TWI59G0438 Tripterygium wilfordii HOM05D007630 ORTHO05D009637 2.9e-74 282.7 246 63.0
CANSAT01G1787 Cannabis sativa HOM05D007630 ORTHO05D009637 6.5e-74 281.6 256 61.3
COL.COLO4_31101 Corchorus olitorius HOM05D007630 ORTHO05D009637 8.5e-74 281.2 250 60.8
Prupe.1G587600 Prunus persica HOM05D007630 ORTHO05D009637 8.5e-74 281.2 254 63.0
Hund29384 Selenicereus undatus HOM05D007630 ORTHO05D009637 1.5e-73 280.4 247 60.7
Hund29386 Selenicereus undatus HOM05D007630 ORTHO05D009637 1.5e-73 280.4 247 60.7
GSVIVG01023115001 Vitis vinifera HOM05D007630 ORTHO05D009637 1.5e-73 280.4 246 63.0
FAN04G2951 Fragaria x ananassa HOM05D007630 ORTHO05D009637 1.9e-73 280.0 249 63.9
CSS0024546 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 2.5e-73 279.6 245 62.4
Thecc.06G066000 Theobroma cacao HOM05D007630 ORTHO05D009637 2.5e-73 279.6 243 61.7
MSTRG.16453 Avicennia marina HOM05D007630 ORTHO05D009637 5.5e-73 278.5 251 62.5
Ciclev10002337m.g Citrus clementina HOM05D007630 ORTHO05D009637 5.5e-73 278.5 246 62.2
FAN18G2712 Fragaria x ananassa HOM05D007630 ORTHO05D009637 1.2e-72 277.3 256 63.7
Psat4g001800 Pisum sativum HOM05D007630 ORTHO05D009637 1.2e-72 277.3 241 62.7
Actinidia11717 Actinidia chinensis HOM05D007630 ORTHO05D009637 2.1e-72 276.6 244 61.1
Actinidia17707 Actinidia chinensis HOM05D007630 ORTHO05D009637 2.1e-72 276.6 247 61.1
DCAR_001874 Daucus carota HOM05D007630 ORTHO05D009637 2.1e-72 276.6 247 62.3
Lj9A243T50 Lonicera japonica HOM05D007630 ORTHO05D009637 2.1e-72 276.6 252 60.7
FAN13G2616 Fragaria x ananassa HOM05D007630 ORTHO05D009637 2.7e-72 276.2 256 63.3
Rhsim11G0114600 Rhododendron simsii HOM05D007630 ORTHO05D009637 2.3e-71 273.1 264 58.7
Lalb_Chr07g0176861 Lupinus albus HOM05D007630 ORTHO05D009637 3.0e-71 272.7 246 62.2
Duzib192G0579 Durio zibethinus HOM05D007630 ORTHO05D009637 4.0e-71 272.3 237 62.0
Aqoxy6G00011 Aquilegia oxysepala HOM05D007630 ORTHO05D009637 5.2e-71 271.9 245 62.0
Cpa.g.sc246.13 Carica papaya HOM05D007630 ORTHO05D009637 6.7e-71 271.6 247 63.2
arahy.Tifrunner.gnm1.ann1.CDQ02R Arachis hypogaea HOM05D007630 ORTHO05D009637 1.2e-70 270.8 259 59.5
arahy.Tifrunner.gnm1.ann1.XQ55VB Arachis hypogaea HOM05D007630 ORTHO05D009637 1.2e-70 270.8 259 59.5
Atru.chr6.70 Acer truncatum HOM05D007630 ORTHO05D009637 1.5e-70 270.4 245 62.0
Manes.06G015300 Manihot esculenta HOM05D007630 ORTHO05D009637 1.5e-70 270.4 244 60.7
AUR62040114 Chenopodium quinoa HOM05D007630 ORTHO05D009637 2.6e-70 269.6 244 61.9
CSS0032395 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 4.4e-70 268.9 244 61.5
Migut.B00699 Erythranthe guttata HOM05D007630 ORTHO05D009637 7.5e-70 268.1 251 58.6
ECA236G0298 Erigeron canadensis HOM05D007630 ORTHO05D009637 9.7e-70 267.7 257 61.1
Gohir.A05G160300 Gossypium hirsutum HOM05D007630 ORTHO05D009637 1.3e-69 267.3 255 59.2
Gorai.009G168000 Gossypium raimondii HOM05D007630 ORTHO05D009637 1.3e-69 267.3 255 59.2
vmacro01631 Vaccinium macrocarpon HOM05D007630 ORTHO05D009637 1.7e-69 266.9 241 61.0
Haze_09954 Corylus avellana HOM05D007630 ORTHO05D009637 2.8e-69 266.2 236 63.1
Eucgr.G00050 Eucalyptus grandis HOM05D007630 ORTHO05D009637 6.3e-69 265.0 244 61.5
MD08G1250400 Malus domestica HOM05D007630 ORTHO05D009637 1.1e-68 264.2 257 60.7
Oeu000167.1 Olea europaea HOM05D007630 ORTHO05D009637 1.1e-68 264.2 243 59.7
Gohir.A10G157500 Gossypium hirsutum HOM05D007630 ORTHO05D009637 1.4e-68 263.8 248 58.5
Gorai.011G090500 Gossypium raimondii HOM05D007630 ORTHO05D009637 4.1e-68 262.3 248 57.7
PGR042G3439 Punica granatum HOM05D007630 ORTHO05D009637 1.2e-67 260.8 242 60.3
HanXRQChr16g0531021 Helianthus annuus HOM05D007630 ORTHO05D009637 3.5e-67 259.2 255 58.8
THA.LOC104809043 Tarenaya hassleriana HOM05D007630 ORTHO05D009637 3.5e-67 259.2 248 58.5
VMungo1215G0090 Vigna mungo HOM05D007630 ORTHO05D009637 4.5e-67 258.8 217 65.4
CDE05G2797 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 1.5e-65 253.8 239 59.0
ATR1089G051 Amborella trichopoda HOM05D007630 ORTHO05D009637 3.6e-64 249.2 253 56.9
CDE05G1783 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 4.7e-64 248.8 239 57.3
Zm00001eb168190 Zea mays HOM05D007630 ORTHO05D009637 8.0e-64 248.1 256 59.0
AT5G49800 Arabidopsis thaliana HOM05D007630 ORTHO05D009637 2.3e-63 246.5 251 53.4
AL8G23760 Arabidopsis lyrata HOM05D007630 ORTHO05D009637 1.5e-62 243.8 246 54.5
Gohir.D10G083200 Gossypium hirsutum HOM05D007630 ORTHO05D009637 7.5e-62 241.5 248 54.8
TAR629G1327 Trochodendron aralioides HOM05D007630 ORTHO05D009637 1.7e-61 240.4 213 62.0
CARHR258980 Cardamine hirsuta HOM05D007630 ORTHO05D009637 2.2e-61 240.0 245 53.9
PSO017G5941 Papaver somniferum HOM05D007630 ORTHO05D009637 2.2e-61 240.0 263 57.0
Lsat_1_v5_gn_9_82660 Lactuca sativa HOM05D007630 ORTHO05D009637 2.8e-61 239.6 264 54.9
Sp6g11150 Schrenkiella parvula HOM05D007630 ORTHO05D009637 3.7e-61 239.2 247 54.3
PSO170G3600 Papaver somniferum HOM05D007630 ORTHO05D009637 4.8e-61 238.8 263 54.0
AUR62032498 Chenopodium quinoa HOM05D007630 ORTHO05D009637 6.3e-61 238.4 213 60.6
Carub.0008s0968 Capsella rubella HOM05D007630 ORTHO05D009637 1.1e-60 237.7 250 52.8
Aa31sc192G10 Aethionema arabicum HOM05D007630 ORTHO05D009637 3.5e-59 232.6 245 53.5
SGA_v2.0_scaffold254G45223 Striga asiatica HOM05D007630 ORTHO05D009637 4.7e-56 222.2 242 54.1
DCAR_028500 Daucus carota HOM05D007630 ORTHO05D009637 2.0e-54 216.9 213 57.7
Oeu043594.1 Olea europaea HOM05D007630 ORTHO05D009637 3.7e-53 212.6 189 61.9
SEGI_35985 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 5.9e-51 205.3 230 50.9
Sc03g0005590 Simmondsia chinensis HOM05D007630 ORTHO05D009637 1.7e-45 187.2 154 61.7
Mapoly0105s0042 Marchantia polymorpha HOM05D007630 ORTHO05D009637 1.2e-43 181.0 225 44.0
Gohir.D05G163000 Gossypium hirsutum HOM05D007630 ORTHO05D009637 2.7e-43 179.9 167 56.9
SMO198G0095 Selaginella moellendorffii HOM05D007630 ORTHO05D009637 2.7e-43 179.9 239 43.5
Cfa004415 Carpinus fangiana HOM05D000089 ORTHO05D000104 1.7e-42 177.2 236 49.2
Dinv30982 Davidia involucrata HOM05D007630 ORTHO05D009637 2.3e-42 176.8 144 63.2
MBI06_g17062_MAGBIO Magnolia biondii HOM05D007630 ORTHO05D009637 1.5e-38 164.1 150 62.7
SEGI_15718 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 2.1e-16 90.5 238 29.4
MD15G1445600 Malus domestica HOM05D007630 ORTHO05D009637 1.4e-15 87.8 83 60.2
Dinv29656 Davidia involucrata HOM05D007630 ORTHO05D009637 1.9e-12 77.4 119 42.0


User provided reference genes

Program Settings