Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0226400 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D299577 1.1e-306 1055.8 546 100.0
Os11g0225300 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D014245 1.3e-94 351.3 421 48.0
Os11g0686400 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D014245 2.4e-75 287.3 438 41.3
Os11g0684100 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D014245 7.7e-74 282.3 386 44.0
Os05g0479700 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D014245 1.8e-70 271.2 354 46.9
Os11g0223201 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D014245 8.0e-63 245.7 376 41.2
Os11g0685600 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D014245 1.1e-59 235.3 319 45.5
Os11g0686900 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D014245 5.0e-57 226.5 461 37.3
Os10g0370100 Oryza sativa ssp. japonica HOM05D002542 ORTHO05D014245 7.2e-56 222.6 430 39.3
Os11g0462900 Oryza sativa ssp. japonica HOM05D000530 ORTHO05D014245 9.5e-56 222.2 408 38.0
Zm00001eb164940 Zea mays HOM05D000011 ORTHO05D014245 1.4e-51 208.4 393 38.4
Os08g0396700 Oryza sativa ssp. japonica HOM05D000790 ORTHO05D000769 8.3e-36 156.0 260 38.8
Os12g0281300 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D014245 1.7e-33 148.3 432 29.9
Os08g0202400 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D014245 3.0e-33 147.5 372 35.2
Os12g0237900 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D014245 1.9e-32 144.8 372 34.1
Os08g0205100 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 1.6e-23 115.2 375 33.6
Os08g0388300 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 7.6e-21 106.3 376 27.9
Os08g0387700 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 9.9e-21 105.9 359 27.3
Os08g0373000 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D014245 1.7e-20 105.1 368 29.6
Os12g0272800 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 1.4e-19 102.1 364 31.0
Os08g0205150 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D014245 7.1e-19 99.8 345 31.9
Os02g0301800 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 3.5e-18 97.4 321 31.2
Os11g0237900 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 8.7e-17 92.8 364 30.5
Os12g0198900 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 1.2e-15 89.0 373 28.2
Os07g0197500 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 1.6e-15 88.6 345 29.9
Os11g0249000 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 1.6e-15 88.6 375 26.7
Os12g0273300 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 1.6e-15 88.6 364 29.1
Medtr3g055720 Medicago truncatula HOM05D000011 ORTHO05D000157 4.7e-15 87.0 296 30.1
Os11g0258500 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 4.7e-15 87.0 402 27.9
Glyma.08G317400 Glycine max HOM05D000011 ORTHO05D000157 6.2e-15 86.7 336 29.8
Os11g0657900 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 1.1e-14 85.9 331 29.6
Zm00001eb136790 Zea mays HOM05D000011 ORTHO05D000157 1.1e-14 85.9 374 29.4
Glyma.08G323200 Glycine max HOM05D000011 ORTHO05D000157 9.0e-14 82.8 313 30.0
Glyma.18G190900 Glycine max HOM05D000011 ORTHO05D000157 9.0e-14 82.8 316 30.7
Glyma.08G318000 Glycine max HOM05D000011 ORTHO05D000157 2.0e-13 81.6 285 32.3
Glyma.08G317700 Glycine max HOM05D000011 ORTHO05D000157 3.4e-13 80.9 337 28.5
Os11g0606800 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D030311 3.4e-13 80.9 421 25.7
Medtr3g055830 Medicago truncatula HOM05D000011 ORTHO05D000157 7.6e-13 79.7 333 28.5
Glyma.08G319300 Glycine max HOM05D000011 ORTHO05D000157 2.2e-12 78.2 314 29.0
Os07g0197300 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 3.8e-12 77.4 332 28.6
Os12g0467300 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 3.8e-12 77.4 383 27.7
Zm00001eb112770 Zea mays HOM05D000011 ORTHO05D000157 2.1e-10 71.6 343 28.6
Medtr3g055740 Medicago truncatula HOM05D000011 ORTHO05D000157 6.0e-10 70.1 352 28.7
Os09g0517200 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 6.0e-10 70.1 371 27.8
Os11g0588400 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D016364 6.0e-10 70.1 370 27.0
Medtr3g455910 Medicago truncatula HOM05D000011 ORTHO05D000157 7.8e-10 69.7 340 27.6
Os12g0495600 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 7.8e-10 69.7 388 27.8
Os12g0564800 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 1.3e-09 68.9 377 27.1
Medtr3g456070 Medicago truncatula HOM05D000011 ORTHO05D000157 2.3e-09 68.2 340 27.4
Os11g0655700 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D012693 3.0e-09 67.8 353 26.6
Os08g0526400 Oryza sativa ssp. japonica HOM05D002186 ORTHO05D002225 5.1e-09 67.0 78 48.7
Nn7g36778 Nelumbo nucifera HOM05D000011 ORTHO05D000157 6.6e-09 66.6 313 29.7
Os11g0605100 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D030311 8.7e-09 66.2 455 22.4
TPR.G1940 Trifolium pratense HOM05D000011 ORTHO05D000157 8.7e-09 66.2 300 27.7
Os02g0272900 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 1.5e-08 65.5 143 35.0
Medtr3g055870 Medicago truncatula HOM05D000011 ORTHO05D000157 3.3e-08 64.3 339 27.4
CANSAT80G2827 Cannabis sativa HOM05D000011 ORTHO05D000157 9.6e-08 62.8 242 30.2
Psat5g171640 Pisum sativum HOM05D000011 ORTHO05D000157 9.6e-08 62.8 275 27.6
Zm00001eb115770 Zea mays HOM05D000011 ORTHO05D017099 1.3e-07 62.4 278 27.0
Hma1.2p1_0112F.1_g054630 Hydrangea macrophylla HOM05D000011 ORTHO05D000018 2.1e-07 61.6 328 28.7
Hma1.2p1_0112F.1_g054400 Hydrangea macrophylla HOM05D000011 ORTHO05D000018 2.8e-07 61.2 171 35.7
TPR.G23600 Trifolium pratense HOM05D000011 ORTHO05D000157 1.1e-06 59.3 315 25.7
Dinv29572 Davidia involucrata HOM05D000011 ORTHO05D000157 1.4e-06 58.9 220 29.1
Psat5g171040 Pisum sativum HOM05D000011 ORTHO05D000157 1.4e-06 58.9 261 26.4
Os11g0689100 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D017099 1.8e-06 58.5 410 24.9
TPR.G1964 Trifolium pratense HOM05D000011 ORTHO05D000157 1.8e-06 58.5 292 26.7
Hma1.2p1_0112F.1_g054350 Hydrangea macrophylla HOM05D000011 ORTHO05D000018 2.4e-06 58.2 323 28.8
Os08g0372700 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 2.4e-06 58.2 321 24.9
Gohir.A08G195300 Gossypium hirsutum HOM05D002186 ORTHO05D002225 3.1e-06 57.8 71 39.4
TAR633G1439 Trochodendron aralioides HOM05D000011 ORTHO05D000157 3.1e-06 57.8 215 31.2
Os07g0141700 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D012693 5.3e-06 57.0 325 24.9
QL08p002384 Quercus lobata HOM05D000011 ORTHO05D000157 5.3e-06 57.0 223 26.9
TPR.G35479 Trifolium pratense HOM05D000011 ORTHO05D000157 6.9e-06 56.6 264 28.4
CSS0034815 Camellia sinensis var. sinensis HOM05D000011 ORTHO05D000018 9.0e-06 56.2 264 28.0


User provided reference genes

Program Settings