Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0220400 Oryza sativa ssp. japonica HOM05D000070 ORTHO05D007358 1.3e-263 912.5 468 100.0
Zm00001eb169190 Zea mays HOM05D000070 ORTHO05D007358 1.5e-147 526.9 469 61.8
Aqoxy5G00447 Aquilegia oxysepala HOM05D000070 ORTHO05D007358 7.1e-52 209.1 454 35.0
HPP92_005675 Vanilla planifolia HOM05D000070 ORTHO05D007358 5.1e-50 203.0 444 34.0
TAR636G1288 Trochodendron aralioides HOM05D000070 ORTHO05D007358 1.3e-48 198.4 513 34.5
CSS0017562 Camellia sinensis var. sinensis HOM05D000070 ORTHO05D007358 2.1e-48 197.6 463 34.3
Dinv20771 Davidia involucrata HOM05D000070 ORTHO05D007358 2.1e-48 197.6 501 33.7
Duzib084G0952 Durio zibethinus HOM05D000070 ORTHO05D007358 1.4e-47 194.9 501 32.7
Lj1C1085G1 Lonicera japonica HOM05D000070 ORTHO05D007358 6.9e-47 192.6 410 33.9
COL.COLO4_16973 Corchorus olitorius HOM05D000070 ORTHO05D007358 1.2e-46 191.8 511 32.1
GSVIVG01025783001 Vitis vinifera HOM05D000070 ORTHO05D007358 5.8e-46 189.5 456 33.6
MBI06_g17222_MAGBIO Magnolia biondii HOM05D000070 ORTHO05D007358 2.2e-45 187.6 503 33.2
vmacro04768 Vaccinium macrocarpon HOM05D000070 ORTHO05D007358 4.9e-45 186.4 502 31.7
ATR0820G242 Amborella trichopoda HOM05D000070 ORTHO05D007358 1.1e-44 185.3 481 34.1
Ca_08370_v3 Cicer arietinum L. HOM05D000070 ORTHO05D007358 4.2e-44 183.3 437 33.2
Thecc.03G306800 Theobroma cacao HOM05D000070 ORTHO05D007358 4.2e-44 183.3 511 33.1
SEGI_06917 Sequoiadendron giganteum HOM05D000070 ORTHO05D007358 1.2e-43 181.8 492 32.3
Eucgr.K01669 Eucalyptus grandis HOM05D000070 ORTHO05D007358 4.6e-43 179.9 500 32.4
CDE05G3455 Ceratophyllum demersum HOM05D000070 ORTHO05D007358 7.9e-43 179.1 442 33.3
Gohir.D08G175400 Gossypium hirsutum HOM05D000070 ORTHO05D007358 7.9e-43 179.1 504 32.7
CDE07G0994 Ceratophyllum demersum HOM05D000070 ORTHO05D007358 1.0e-42 178.7 445 33.7
Prupe.3G062600 Prunus persica HOM05D000070 ORTHO05D007358 1.0e-42 178.7 457 34.8
Ciclev10013654m.g Citrus clementina HOM05D000070 ORTHO05D007358 1.9e-41 174.5 507 32.1
Lalb_Chr14g0365611 Lupinus albus HOM05D000070 ORTHO05D007358 2.5e-41 174.1 510 31.0
Gorai.004G183300 Gossypium raimondii HOM05D000070 ORTHO05D007358 4.3e-41 173.3 504 32.3
Glyma.03G123500 Glycine max HOM05D000070 ORTHO05D007358 1.3e-40 171.8 462 32.9
Lj1g0022985 Lotus japonicus HOM05D000070 ORTHO05D007358 1.3e-40 171.8 491 32.4
Gohir.A08G154900 Gossypium hirsutum HOM05D000070 ORTHO05D007358 2.1e-40 171.0 503 32.0
MD09G1206200 Malus domestica HOM05D000070 ORTHO05D007358 3.7e-40 170.2 453 33.6
QL07p012633 Quercus lobata HOM05D000070 ORTHO05D007358 3.7e-40 170.2 508 31.3
Cpa.g.sc5.153 Carica papaya HOM05D000070 ORTHO05D007358 4.8e-40 169.9 509 31.6
DCAR_020593 Daucus carota HOM05D000070 ORTHO05D007358 6.2e-40 169.5 522 30.7
TPR.G22681 Trifolium pratense HOM05D000070 ORTHO05D007358 6.2e-40 169.5 445 31.7
MSTRG.6311 Avicennia marina HOM05D000070 ORTHO05D007358 8.1e-40 169.1 458 31.2
Rhsim07G0200300 Rhododendron simsii HOM05D000070 ORTHO05D007358 8.1e-40 169.1 502 31.1
Potri.006G035000 Populus trichocarpa HOM05D000070 ORTHO05D007358 3.1e-39 167.2 502 30.1
Psat3g081080 Pisum sativum HOM05D000070 ORTHO05D007358 4.0e-39 166.8 495 31.3
Atru.chr12.1313 Acer truncatum HOM05D000070 ORTHO05D007358 9.0e-39 165.6 459 31.4
Manes.08G062100 Manihot esculenta HOM05D000070 ORTHO05D007358 2.6e-38 164.1 505 30.1
arahy.Tifrunner.gnm1.ann1.GDL09X Arachis hypogaea HOM05D000070 ORTHO05D007358 4.5e-38 163.3 498 31.7
arahy.Tifrunner.gnm1.ann1.YU3HKG Arachis hypogaea HOM05D000070 ORTHO05D007358 4.5e-38 163.3 474 31.9
FAN05G1937 Fragaria x ananassa HOM05D000070 ORTHO05D007358 5.8e-38 162.9 464 30.4
HanXRQChr13g0406801 Helianthus annuus HOM05D000070 ORTHO05D007358 7.6e-38 162.5 486 32.5
Phvul.001G119600 Phaseolus vulgaris HOM05D000070 ORTHO05D007358 1.3e-37 161.8 499 30.7
SGA_v2.0_scaffold66G22283 Striga asiatica HOM05D000070 ORTHO05D007358 1.3e-37 161.8 499 29.5
Medtr7g088830 Medicago truncatula HOM05D000070 ORTHO05D007358 2.2e-37 161.0 426 31.7
FAN09G2492 Fragaria x ananassa HOM05D000070 ORTHO05D007358 3.8e-37 160.2 499 31.5
FAN02G0829 Fragaria x ananassa HOM05D000070 ORTHO05D007358 1.4e-36 158.3 455 29.9
AUR62030281 Chenopodium quinoa HOM05D000070 ORTHO05D007358 2.5e-36 157.5 411 32.6
Migut.J01627 Erythranthe guttata HOM05D000070 ORTHO05D007358 2.5e-36 157.5 448 30.1
Medtr7g089040 Medicago truncatula HOM05D000070 ORTHO05D007358 3.2e-36 157.1 489 30.7
Nitab4.5_0008332g0030 Nicotiana tabacum HOM05D000070 ORTHO05D007358 3.2e-36 157.1 449 30.3
FvH4_6g32040 Fragaria vesca HOM05D000070 ORTHO05D007358 4.2e-36 156.8 498 30.3
FAN14G4524 Fragaria x ananassa HOM05D000070 ORTHO05D007358 4.2e-36 156.8 498 30.3
Nitab4.5_0000123g0590 Nicotiana tabacum HOM05D000070 ORTHO05D007358 5.5e-36 156.4 449 30.1
Sed0024109 Sechium edule HOM05D000070 ORTHO05D007358 5.5e-36 156.4 444 32.2
RcHm_v2.0_Chr2g0139701 Rosa chinensis HOM05D000070 ORTHO05D007358 9.3e-36 155.6 405 34.8
Peaxi162Scf00003g05131 Petunia axillaris HOM05D000070 ORTHO05D007358 1.2e-35 155.2 450 30.7
THA.LOC104824382 Tarenaya hassleriana HOM05D000070 ORTHO05D007358 1.6e-35 154.8 507 30.0
PSO339G6190 Papaver somniferum HOM05D000070 ORTHO05D007358 2.1e-35 154.5 484 29.1
PSO384G4037 Papaver somniferum HOM05D000070 ORTHO05D007358 2.1e-35 154.5 458 30.6
SalBow6G2908 Salvia bowleyana HOM05D000070 ORTHO05D007358 2.1e-35 154.5 522 30.3
Sopen10g028980 Solanum pennellii HOM05D000070 ORTHO05D007358 2.7e-35 154.1 498 30.3
Lsat_1_v5_gn_7_62300 Lactuca sativa HOM05D000070 ORTHO05D007358 4.6e-35 153.3 484 30.8
Hund19077 Selenicereus undatus HOM05D000070 ORTHO05D007358 1.3e-34 151.8 518 29.3
Sabra06G0023400 Salix brachista HOM05D000070 ORTHO05D007358 1.8e-34 151.4 566 27.6
Oeu005223.1 Olea europaea HOM05D000070 ORTHO05D007358 2.3e-34 151.0 439 31.2
Pp3c6_25280 Physcomitrium patens HOM05D000070 ORTHO05D007358 3.0e-34 150.6 455 30.1
MELO3C018435.2 Cucumis melo HOM05D000070 ORTHO05D007358 5.1e-34 149.8 404 31.9
AUR62018382 Chenopodium quinoa HOM05D000070 ORTHO05D007358 8.7e-34 149.1 411 31.4
ClCG09G015840 Citrullus lanatus HOM05D000070 ORTHO05D007358 8.7e-34 149.1 509 30.6
EL10Ac3g07273 Beta vulgaris HOM05D000070 ORTHO05D007358 1.5e-33 148.3 510 29.6
AUR62043208 Chenopodium quinoa HOM05D000070 ORTHO05D007358 1.5e-33 148.3 415 31.6
Cc06_g20150 Coffea canephora HOM05D000070 ORTHO05D007358 3.3e-33 147.1 504 30.0
VMungo1383G0846 Vigna mungo HOM05D000070 ORTHO05D007358 4.3e-33 146.7 526 29.7
Haze_20262 Corylus avellana HOM05D000070 ORTHO05D007358 9.6e-33 145.6 407 32.7
CsaV3_7G008770 Cucumis sativus L. HOM05D000070 ORTHO05D007358 1.3e-32 145.2 437 30.0
Solyc10g078320.2 Solanum lycopersicum HOM05D000070 ORTHO05D007358 2.1e-32 144.4 497 29.0
Carub.0005s2343 Capsella rubella HOM05D000070 ORTHO05D007358 2.8e-32 144.1 501 30.1
CAN.G960.72 Capsicum annuum HOM05D000070 ORTHO05D007358 4.8e-32 143.3 503 30.4
C08p31920 Brassica napus HOM05D000070 ORTHO05D007358 1.1e-31 142.1 486 29.4
ECA248G2711 Erigeron canadensis HOM05D000070 ORTHO05D007358 1.4e-31 141.7 375 32.8
Actinidia12855 Actinidia chinensis HOM05D000070 ORTHO05D007358 3.1e-31 140.6 353 31.2
BolC8t50809H Brassica oleracea HOM05D000070 ORTHO05D007358 4.1e-31 140.2 487 29.0
BcaC07g39973 Brassica carinata HOM05D000070 ORTHO05D007358 5.3e-31 139.8 487 29.0
AT3G56690 Arabidopsis thaliana HOM05D000070 ORTHO05D007358 3.4e-30 137.1 490 29.0
Sp5g05880 Schrenkiella parvula HOM05D000070 ORTHO05D007358 3.4e-30 137.1 503 30.2
AL5G38060 Arabidopsis lyrata HOM05D000070 ORTHO05D007358 7.6e-30 136.0 493 30.0
PGR142G2226 Punica granatum HOM05D000070 ORTHO05D007358 7.6e-30 136.0 504 29.0
A09p49520 Brassica napus HOM05D000070 ORTHO05D007358 1.3e-29 135.2 487 28.3
BraA09t40406Z Brassica rapa HOM05D000070 ORTHO05D007358 1.3e-29 135.2 487 28.3
CARHR166810 Cardamine hirsuta HOM05D000070 ORTHO05D007358 1.1e-28 132.1 504 29.4
BcaC07g40128 Brassica carinata HOM05D000070 ORTHO05D007358 1.9e-28 131.3 492 28.9
Thhalv10005761m.g Eutrema salsugineum HOM05D000070 ORTHO05D007358 2.5e-28 131.0 503 28.8
Thhalv10006379m.g Eutrema salsugineum HOM05D000070 ORTHO05D007358 2.5e-28 131.0 498 28.5
Aa31LG10G14780 Aethionema arabicum HOM05D000070 ORTHO05D007358 5.5e-28 129.8 480 28.5
Hma1.2p1_1022F.1_g248720 Hydrangea macrophylla HOM05D000070 ORTHO05D007358 6.7e-26 122.9 338 32.8
unitig_21.g20681 Utricularia gibba HOM05D000070 ORTHO05D007358 3.7e-24 117.1 454 30.6
Mapoly0026s0037 Marchantia polymorpha HOM05D000070 ORTHO05D007358 1.2e-22 112.1 478 26.8
CiPaw.09G050200 Carya illinoinensis HOM05D000070 ORTHO05D007358 1.1e-20 105.5 259 36.3
Sc19g0008030 Simmondsia chinensis HOM05D000070 ORTHO05D007358 5.5e-20 103.2 208 36.5
ATR1096G065 Amborella trichopoda HOM05D000070 ORTHO05D007358 1.8e-18 98.2 313 30.4
Dinv40077 Davidia involucrata HOM05D000070 ORTHO05D007358 3.7e-16 90.5 247 31.6
Haze_05085 Corylus avellana HOM05D000070 ORTHO05D007358 1.4e-15 88.6 367 28.9
AagrBONN_evm.TU.Sc2ySwM_368.2681 Anthoceros agrestis HOM05D000070 ORTHO05D007358 1.8e-15 88.2 402 27.1
Atru.chr12.1646 Acer truncatum HOM05D000070 ORTHO05D007358 3.8e-13 80.5 159 37.7
HPP92_005653 Vanilla planifolia HOM05D000070 ORTHO05D007358 6.5e-13 79.7 116 42.2
Sc19g0008040 Simmondsia chinensis HOM05D000070 ORTHO05D007358 3.0e-10 70.9 158 37.3
Dinv40076 Davidia involucrata HOM05D000070 ORTHO05D007358 8.8e-10 69.3 116 41.4
CBR_g3187 Chara braunii HOM05D000070 ORTHO05D000002 4.4e-09 67.0 194 30.9
Nn7g36932 Nelumbo nucifera HOM05D000070 ORTHO05D007358 5.7e-09 66.6 175 30.9
ATR1096G140 Amborella trichopoda HOM05D000070 ORTHO05D007358 1.3e-08 65.5 109 39.4
Actinidia29575 Actinidia chinensis HOM05D000070 ORTHO05D007358 3.1e-07 60.8 78 44.9
Atru.chr12.1645 Acer truncatum HOM05D000070 ORTHO05D007358 7.7e-06 56.2 239 28.0


User provided reference genes

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