Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0219400 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 2.0e-203 712.2 356 100.0
Os12g0118800 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 5.3e-100 368.6 350 56.3
Os05g0124000 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 1.3e-61 241.1 283 49.5
Os05g0124600 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 2.0e-59 233.8 297 46.5
Os07g0515700 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 2.8e-56 223.4 285 47.0
Os10g0102200 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 1.2e-54 218.0 289 45.3
Os07g0515900 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 2.0e-54 217.2 285 46.7
Zm00001eb205000 Zea mays HOM05D013330 ORTHO05D009800 2.6e-54 216.9 281 48.4
Os01g0942900 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 1.7e-53 214.2 297 43.8
Os01g0943800 Oryza sativa ssp. japonica HOM05D013330 ORTHO05D009800 2.2e-53 213.8 297 43.8
Dinv23281 Davidia involucrata HOM05D008239 ORTHO05D009800 4.6e-27 126.3 243 33.7
Dinv12600 Davidia involucrata HOM05D008239 ORTHO05D009800 1.1e-25 121.7 245 33.5
Dinv25412 Davidia involucrata HOM05D008239 ORTHO05D009800 8.1e-24 115.5 242 32.2
Dinv12606 Davidia involucrata HOM05D008239 ORTHO05D009800 3.4e-22 110.2 245 31.0
Dinv30487 Davidia involucrata HOM05D008239 ORTHO05D009800 7.6e-22 109.0 235 29.8
Dinv38088 Davidia involucrata HOM05D008239 ORTHO05D009800 2.2e-21 107.5 246 31.3
Rhsim06G0231700 Rhododendron simsii HOM05D008239 ORTHO05D009800 1.2e-19 101.7 241 28.6
Cc03_g02640 Coffea canephora HOM05D008239 ORTHO05D009800 1.3e-18 98.2 250 28.0
Dinv30439 Davidia involucrata HOM05D008239 ORTHO05D009800 6.7e-18 95.9 166 34.9
Dinv42357 Davidia involucrata HOM05D008239 ORTHO05D009800 4.3e-17 93.2 246 30.1
Dinv25440 Davidia involucrata HOM05D008239 ORTHO05D009800 6.2e-16 89.4 238 28.2
Dinv23282 Davidia involucrata HOM05D008239 ORTHO05D009800 4.0e-15 86.7 176 30.7
COL.COLO4_19868 Corchorus olitorius HOM05D008239 ORTHO05D009800 1.5e-14 84.7 266 22.6
Hma1.2p1_0120F.1_g057080 Hydrangea macrophylla HOM05D008239 ORTHO05D009800 1.5e-14 84.7 258 28.7
Dinv38087 Davidia involucrata HOM05D008239 ORTHO05D009800 7.6e-14 82.4 230 28.7
Dinv27632 Davidia involucrata HOM05D008239 ORTHO05D009800 1.7e-13 81.3 249 26.5
EL10Ac3g05534 Beta vulgaris HOM05D025186 ORTHO05D009800 1.1e-12 78.6 159 30.8
Cc02_g10150 Coffea canephora HOM05D008239 ORTHO05D009800 1.1e-12 78.6 185 31.9
Rhsim06G0198100 Rhododendron simsii HOM05D008239 ORTHO05D009800 1.1e-12 78.6 247 27.9
Dinv07268 Davidia involucrata HOM05D008239 ORTHO05D009800 1.4e-12 78.2 217 30.9
Dinv25441 Davidia involucrata HOM05D008239 ORTHO05D009800 4.2e-12 76.6 171 29.8
Dinv25443 Davidia involucrata HOM05D008239 ORTHO05D009800 7.1e-12 75.9 248 26.2
AUR62037189 Chenopodium quinoa HOM05D025186 ORTHO05D009800 7.9e-11 72.4 165 30.9
Dinv27633 Davidia involucrata HOM05D008239 ORTHO05D009800 1.0e-10 72.0 171 26.9
vmacro22053 Vaccinium macrocarpon HOM05D008239 ORTHO05D009800 2.3e-10 70.9 266 22.9
Dinv42358 Davidia involucrata HOM05D008239 ORTHO05D009800 7.4e-09 65.9 248 25.8
Dinv04006 Davidia involucrata HOM05D008239 ORTHO05D009800 2.1e-08 64.3 162 25.9
Dinv41768 Davidia involucrata HOM05D018862 ORTHO05D009800 2.1e-08 64.3 250 25.6
Dinv41766 Davidia involucrata HOM05D008239 ORTHO05D009800 2.8e-08 63.9 161 29.8
COL.COLO4_19875 Corchorus olitorius HOM05D008239 ORTHO05D009800 6.3e-08 62.8 178 28.1
AUR62020016 Chenopodium quinoa HOM05D023548 ORTHO05D009800 3.1e-07 60.5 128 31.2
COL.COLO4_12090 Corchorus olitorius HOM05D008239 ORTHO05D009800 5.3e-07 59.7 167 25.7
DCAR_023499 Daucus carota HOM05D008239 ORTHO05D009800 5.3e-07 59.7 192 27.6
AUR62013258 Chenopodium quinoa HOM05D023548 ORTHO05D009800 6.9e-07 59.3 128 31.2
Dinv21165 Davidia involucrata HOM05D008239 ORTHO05D009800 9.0e-07 58.9 90 38.9
Dinv24381 Davidia involucrata HOM05D008239 ORTHO05D009800 2.6e-06 57.4 85 41.2


User provided reference genes

Program Settings