Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0219000 Oryza sativa ssp. japonica HOM05D003774 ORTHO05D010174 2.0e-62 242.3 125 100.0
Zm00001eb169160 Zea mays HOM05D003774 ORTHO05D010174 1.2e-30 136.7 127 63.8
FAN18G3876 Fragaria x ananassa HOM05D003402 ORTHO05D003939 3.5e-22 108.6 120 53.3
FAN08G2588 Fragaria x ananassa HOM05D003774 ORTHO05D010174 7.8e-22 107.5 110 56.4
FAN07G1602 Fragaria x ananassa HOM05D003774 ORTHO05D010174 1.0e-21 107.1 110 56.4
FvH4_5g31600 Fragaria vesca HOM05D003774 ORTHO05D010174 1.3e-21 106.7 110 55.5
Aa31LG6G8720 Aethionema arabicum HOM05D003774 ORTHO05D009174 3.9e-21 105.1 95 58.9
Manes.18G106000 Manihot esculenta HOM05D003774 ORTHO05D010174 1.1e-20 103.6 81 65.4
BraA09t38729Z Brassica rapa HOM05D003774 ORTHO05D010174 2.5e-20 102.4 110 50.0
Thhalv10001819m.g Eutrema salsugineum HOM05D003774 ORTHO05D010174 3.3e-20 102.1 98 56.1
THA.LOC104816539 Tarenaya hassleriana HOM05D003774 ORTHO05D010174 4.3e-20 101.7 77 70.1
Rhsim11G0052800 Rhododendron simsii HOM05D003774 ORTHO05D000166 7.3e-20 100.9 111 52.3
A09p31890 Brassica napus HOM05D003774 ORTHO05D010174 9.5e-20 100.5 110 49.1
RcHm_v2.0_Chr7g0227131 Rosa chinensis HOM05D003774 ORTHO05D010174 9.5e-20 100.5 115 53.0
C06p11060 Brassica napus HOM05D003774 ORTHO05D010174 1.6e-19 99.8 110 49.1
Sp1g30100 Schrenkiella parvula HOM05D003774 ORTHO05D010174 2.1e-19 99.4 103 52.4
TAR628G1250 Trochodendron aralioides HOM05D003774 ORTHO05D010174 2.1e-19 99.4 107 59.8
CsaV3_5G040540 Cucumis sativus L. HOM05D003774 ORTHO05D010174 3.6e-19 98.6 76 67.1
Carub.0347s0001 Capsella rubella HOM05D003774 ORTHO05D010174 4.7e-19 98.2 76 63.2
BcaB07g33098 Brassica carinata HOM05D003774 ORTHO05D010174 8.0e-19 97.4 98 54.1
BcaC08g43723 Brassica carinata HOM05D003774 ORTHO05D010174 8.0e-19 97.4 110 48.2
BolC6t36225H Brassica oleracea HOM05D003774 ORTHO05D010174 1.1e-18 97.1 110 48.2
Cfa012970 Carpinus fangiana HOM05D003774 ORTHO05D010174 1.4e-18 96.7 84 60.7
Peaxi162Scf00688g00424 Petunia axillaris HOM05D003774 ORTHO05D010174 1.8e-18 96.3 107 50.5
PGR042G3332 Punica granatum HOM05D003774 ORTHO05D010174 1.8e-18 96.3 93 58.1
Thecc.08G192700 Theobroma cacao HOM05D003774 ORTHO05D010174 1.8e-18 96.3 80 65.0
Nitab4.5_0001463g0060 Nicotiana tabacum HOM05D003774 ORTHO05D010174 2.3e-18 95.9 84 61.9
CANSAT25G1591 Cannabis sativa HOM05D003774 ORTHO05D010174 3.1e-18 95.5 84 57.1
Nitab4.5_0005616g0030 Nicotiana tabacum HOM05D003774 ORTHO05D010174 3.1e-18 95.5 76 64.5
Prupe.1G555700 Prunus persica HOM05D003774 ORTHO05D010174 3.1e-18 95.5 119 50.4
Sabra13G0091200 Salix brachista HOM05D003774 ORTHO05D009174 3.1e-18 95.5 94 56.4
AL1G50100 Arabidopsis lyrata HOM05D003774 ORTHO05D010174 4.0e-18 95.1 110 50.0
PGSC0003DMG400026729 Solanum tuberosum HOM05D003774 ORTHO05D010174 4.0e-18 95.1 108 51.9
GSVIVG01026088001 Vitis vinifera HOM05D003774 ORTHO05D010174 5.2e-18 94.7 76 65.8
Atru.chr13.2372 Acer truncatum HOM05D003774 ORTHO05D010174 6.8e-18 94.4 114 51.8
Haze_21314 Corylus avellana HOM05D003774 ORTHO05D010174 6.8e-18 94.4 104 51.9
Migut.C01324 Erythranthe guttata HOM05D003774 ORTHO05D010174 1.2e-17 93.6 76 64.5
Lsat_1_v5_gn_1_25800 Lactuca sativa HOM05D003774 ORTHO05D010174 1.2e-17 93.6 99 52.5
Actinidia29409 Actinidia chinensis HOM05D003774 ORTHO05D010174 1.5e-17 93.2 72 65.3
CARHR034170 Cardamine hirsuta HOM05D003774 ORTHO05D010174 2.0e-17 92.8 102 52.9
Solyc11g027830.2 Solanum lycopersicum HOM05D003774 ORTHO05D010174 2.0e-17 92.8 110 50.9
CAN.G1483.1 Capsicum annuum HOM05D003774 ORTHO05D010174 5.8e-17 91.3 76 61.8
MBI03_g46804_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 5.8e-17 91.3 82 62.2
PSO170G3079 Papaver somniferum HOM05D003774 ORTHO05D010174 5.8e-17 91.3 109 48.6
PSO782G0406 Papaver somniferum HOM05D003774 ORTHO05D010174 5.8e-17 91.3 95 51.6
MD14G1036300 Malus domestica HOM05D003774 ORTHO05D010174 9.8e-17 90.5 75 66.7
CiPaw.07G235600 Carya illinoinensis HOM05D003774 ORTHO05D010174 1.3e-16 90.1 80 60.0
DCAR_017444 Daucus carota HOM05D003774 ORTHO05D010174 1.3e-16 90.1 75 64.0
Sopen11g022590 Solanum pennellii HOM05D003774 ORTHO05D010174 1.3e-16 90.1 91 57.1
Dinv41759 Davidia involucrata HOM05D003774 ORTHO05D010174 1.7e-16 89.7 78 60.3
Eucgr.F02989 Eucalyptus grandis HOM05D003774 ORTHO05D010174 2.2e-16 89.4 95 55.8
HanXRQChr02g0036571 Helianthus annuus HOM05D003774 ORTHO05D010174 2.2e-16 89.4 74 62.2
SEGI_18058 Sequoiadendron giganteum HOM05D003774 ORTHO05D010174 1.9e-15 86.3 77 58.4
Pp3c18_9200 Physcomitrium patens HOM05D003774 ORTHO05D010174 2.4e-15 85.9 76 55.3
MBI03_g45112_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 3.2e-15 85.5 83 60.2
Ciclev10003535m.g Citrus clementina HOM05D003774 ORTHO05D010174 1.2e-14 83.6 95 53.7
FvH4_5g26640 Fragaria vesca HOM05D003774 ORTHO05D010174 1.2e-14 83.6 116 48.3
Mapoly0085s0045 Marchantia polymorpha HOM05D003774 ORTHO05D010174 3.5e-14 82.0 81 46.9
Lj7A284G37 Lonicera japonica HOM05D003774 ORTHO05D010174 6.0e-14 81.3 62 67.7
ClCG08G000190 Citrullus lanatus HOM05D003774 ORTHO05D010174 1.0e-13 80.5 103 49.5
Cc00_g20990 Coffea canephora HOM05D003774 ORTHO05D010174 1.0e-13 80.5 81 56.8
COL.COLO4_24648 Corchorus olitorius HOM05D003774 ORTHO05D010174 1.0e-13 80.5 67 65.7
TWI14G1031 Tripterygium wilfordii HOM05D003774 ORTHO05D010174 1.9e-12 76.3 63 63.5
ECA247G3883 Erigeron canadensis HOM05D003774 ORTHO05D009174 4.3e-12 75.1 61 59.0
AagrBONN_evm.TU.Sc2ySwM_340.403 Anthoceros agrestis HOM05D000737 ORTHO05D000581 7.5e-09 64.3 95 38.9


User provided reference genes

Program Settings