Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0199000 Oryza sativa ssp. japonica HOM05D000264 ORTHO05D000152 7.2e-92 340.5 164 100.0
Os11g0198900 Oryza sativa ssp. japonica HOM05D000264 ORTHO05D000152 2.2e-48 196.1 154 68.2
Os09g0322500 Oryza sativa ssp. japonica HOM05D000264 ORTHO05D000152 6.0e-22 108.2 130 43.8
Os09g0330700 Oryza sativa ssp. japonica HOM05D000264 ORTHO05D000152 4.3e-20 102.1 130 43.8
Os08g0401100 Oryza sativa ssp. japonica HOM05D000264 ORTHO05D000152 2.1e-19 99.8 118 44.9
Os09g0337300 Oryza sativa ssp. japonica HOM05D000264 ORTHO05D000152 3.6e-19 99.0 160 38.1
Os07g0492966 Oryza sativa ssp. japonica HOM05D000264 ORTHO05D000152 4.4e-17 92.0 112 47.3
Os09g0343200 Oryza sativa ssp. japonica HOM05D000264 ORTHO05D000152 4.9e-16 88.6 130 41.5
Zm00001eb323050 Zea mays HOM05D000264 ORTHO05D000152 2.5e-12 76.3 127 34.6
Os07g0532500 Oryza sativa ssp. japonica HOM05D000264 ORTHO05D000152 1.2e-11 73.9 153 32.0
Rhsim04G0193100 Rhododendron simsii HOM05D000264 ORTHO05D000152 3.4e-09 65.9 129 30.2
Zm00001eb283040 Zea mays HOM05D000264 ORTHO05D000152 3.4e-09 65.9 151 29.1
Dinv14086 Davidia involucrata HOM05D000096 ORTHO05D000045 1.7e-08 63.5 130 30.0
Dinv29924 Davidia involucrata HOM05D000264 ORTHO05D000152 1.7e-08 63.5 130 30.0
Cfa006697 Carpinus fangiana HOM05D000264 ORTHO05D000152 2.9e-08 62.8 121 29.8
Actinidia04484 Actinidia chinensis HOM05D000264 ORTHO05D000152 4.9e-08 62.0 129 31.0
Dinv14029 Davidia involucrata HOM05D000264 ORTHO05D000152 6.4e-08 61.6 130 30.8
Haze_11293 Corylus avellana HOM05D000264 ORTHO05D000152 1.9e-07 60.1 119 30.3
CAN.G449.66 Capsicum annuum HOM05D000264 ORTHO05D000152 2.4e-07 59.7 125 31.2
MBI02_g18415_MAGBIO Magnolia biondii HOM05D000264 ORTHO05D000152 2.4e-07 59.7 127 33.1
Dinv29918 Davidia involucrata HOM05D000264 ORTHO05D000152 4.2e-07 58.9 126 29.4
Haze_11288 Corylus avellana HOM05D000264 ORTHO05D000152 5.4e-07 58.5 123 31.7
Dinv44626 Davidia involucrata HOM05D000264 ORTHO05D000152 7.1e-07 58.2 131 29.0
CSS0045785 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 9.3e-07 57.8 129 31.8
Os11g0182900 Oryza sativa ssp. japonica HOM05D000264 ORTHO05D000152 9.3e-07 57.8 130 30.0
Zm00001eb422040 Zea mays HOM05D000264 ORTHO05D000152 9.3e-07 57.8 67 40.3
Dinv14026 Davidia involucrata HOM05D000264 ORTHO05D000152 1.2e-06 57.4 160 25.0
Dinv14027 Davidia involucrata HOM05D000264 ORTHO05D000152 1.6e-06 57.0 130 28.5
BcaC01g04362 Brassica carinata HOM05D000264 ORTHO05D000152 2.1e-06 56.6 117 32.5
DCAR_029612 Daucus carota HOM05D000264 ORTHO05D000152 2.1e-06 56.6 136 30.1
BcaC09g49234 Brassica carinata HOM05D000264 ORTHO05D000152 2.7e-06 56.2 124 30.6
C03p41010 Brassica napus HOM05D000264 ORTHO05D000152 2.7e-06 56.2 116 32.8
BolC3t16390H Brassica oleracea HOM05D000264 ORTHO05D000152 2.7e-06 56.2 116 32.8
Lj4A628G55 Lonicera japonica HOM05D000264 ORTHO05D000152 2.7e-06 56.2 131 26.0
Os12g0229600 Oryza sativa ssp. japonica HOM05D000264 ORTHO05D000152 3.5e-06 55.8 118 32.2
vmacro19094 Vaccinium macrocarpon HOM05D000264 ORTHO05D000152 3.5e-06 55.8 122 30.3
BraA03t12545Z Brassica rapa HOM05D000264 ORTHO05D000152 4.6e-06 55.5 117 31.6
CAN.G449.41 Capsicum annuum HOM05D000264 ORTHO05D000152 4.6e-06 55.5 135 30.4
Haze_27596 Corylus avellana HOM05D000264 ORTHO05D000152 4.6e-06 55.5 122 30.3
BolC3t16381H Brassica oleracea HOM05D000264 ORTHO05D000152 7.8e-06 54.7 116 31.9
MD03G1094000 Malus domestica HOM05D000264 ORTHO05D000152 7.8e-06 54.7 97 36.1


User provided reference genes

Program Settings