Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0198200 Oryza sativa ssp. japonica HOM05D065905 ORTHO05D011609 3.3e-174 615.1 357 100.0
Zm00001eb168890 Zea mays HOM05D065905 ORTHO05D011609 7.2e-89 331.6 374 54.0
HPP92_011411 Vanilla planifolia HOM05D012719 ORTHO05D011609 6.7e-26 122.5 358 28.2
Nn5g27743 Nelumbo nucifera HOM05D011855 ORTHO05D011609 1.8e-23 114.4 354 26.6
HPP92_016119 Vanilla planifolia HOM05D012719 ORTHO05D011609 1.8e-23 114.4 340 28.2
HPP92_004458 Vanilla planifolia HOM05D012719 ORTHO05D011609 4.2e-20 103.2 349 27.5
Haze_17921 Corylus avellana HOM05D004678 ORTHO05D005880 1.7e-13 81.3 349 23.8
Thecc.08G181900 Theobroma cacao HOM05D011855 ORTHO05D011609 2.9e-13 80.5 299 24.1
Potri.013G113800 Populus trichocarpa HOM05D012719 ORTHO05D011609 6.5e-13 79.3 338 23.4
Potri.019G084400 Populus trichocarpa HOM05D012719 ORTHO05D011609 1.4e-12 78.2 331 24.8
ATR0152G020 Amborella trichopoda HOM05D011855 ORTHO05D011609 7.2e-12 75.9 307 27.4
Haze_17923 Corylus avellana HOM05D012719 ORTHO05D011609 2.7e-11 73.9 342 22.2
Sc01g0001740 Simmondsia chinensis HOM05D011855 ORTHO05D011609 2.7e-11 73.9 299 24.1
Ah.05g178050 Amaranthus hybridus HOM05D012719 ORTHO05D011609 6.1e-11 72.8 343 23.0
Cfa018193 Carpinus fangiana HOM05D012719 ORTHO05D011609 6.1e-11 72.8 342 23.4
AUR62023571 Chenopodium quinoa HOM05D012719 ORTHO05D011609 1.1e-09 68.6 312 23.1
AUR62004652 Chenopodium quinoa HOM05D012719 ORTHO05D011609 1.5e-09 68.2 316 22.8
COL.COLO4_19764 Corchorus olitorius HOM05D012719 ORTHO05D011609 1.9e-09 67.8 311 25.7
Cpa.g.sc66.50 Carica papaya HOM05D011855 ORTHO05D011609 2.5e-09 67.4 338 23.4
Solyc11g017410.1 Solanum lycopersicum HOM05D011855 ORTHO05D011609 1.8e-07 61.2 361 19.9
Dinv41697 Davidia involucrata HOM05D011855 ORTHO05D011609 2.4e-07 60.8 123 27.6
CAN.G370.24 Capsicum annuum HOM05D011855 ORTHO05D011609 7.7e-06 55.8 310 21.0
Nitab4.5_0000560g0170 Nicotiana tabacum HOM05D011855 ORTHO05D011609 7.7e-06 55.8 345 20.0


User provided reference genes

Program Settings