Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0171100 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D006816 4.9e-274 947.2 482 100.0
Os11g0617700 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D006816 1.0e-98 364.8 414 48.6
MBI18_g03709_MAGBIO Magnolia biondii HOM05D005161 ORTHO05D006816 7.3e-36 156.0 425 27.5
Cfa000273 Carpinus fangiana HOM05D005161 ORTHO05D006816 8.1e-35 152.5 365 30.4
Eucgr.D01501 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.8e-34 151.4 423 29.6
Os10g0450400 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D006816 2.4e-34 151.0 418 27.5
MBI18_g32337_MAGBIO Magnolia biondii HOM05D005161 ORTHO05D006816 2.0e-33 147.9 391 27.4
Eucgr.D01511 Eucalyptus grandis HOM05D005161 ORTHO05D006816 4.5e-33 146.7 460 26.7
Eucgr.D01504 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.7e-32 144.8 381 30.2
TWI81G0680 Tripterygium wilfordii HOM05D005161 ORTHO05D006816 1.7e-32 144.8 366 31.1
QL05p075077 Quercus lobata HOM05D005161 ORTHO05D006816 2.9e-32 144.1 391 28.4
QL93p0073_0706 Quercus lobata HOM05D005161 ORTHO05D006816 2.9e-32 144.1 390 30.3
Eucgr.D01291 Eucalyptus grandis HOM05D005161 ORTHO05D006816 8.4e-32 142.5 471 29.1
Haze_06742 Corylus avellana HOM05D005161 ORTHO05D006816 1.1e-31 142.1 339 31.3
Eucgr.D00810 Eucalyptus grandis HOM05D005161 ORTHO05D006816 3.2e-31 140.6 436 27.1
MBI18_g03708_MAGBIO Magnolia biondii HOM05D005161 ORTHO05D006816 5.4e-31 139.8 370 29.7
Eucgr.L00330 Eucalyptus grandis HOM05D005161 ORTHO05D006816 2.7e-30 137.5 419 27.9
MBI18_g06807_MAGBIO Magnolia biondii HOM05D005161 ORTHO05D006816 3.5e-30 137.1 413 29.5
Eucgr.D00811 Eucalyptus grandis HOM05D005161 ORTHO05D006816 6.0e-30 136.3 417 28.3
MBI18_g01406_MAGBIO Magnolia biondii HOM05D005161 ORTHO05D006816 6.0e-30 136.3 403 26.1
Eucgr.D01492 Eucalyptus grandis HOM05D005161 ORTHO05D006816 5.1e-29 133.3 405 28.9
Eucgr.L00332 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.5e-28 131.7 420 27.9
Eucgr.D01507 Eucalyptus grandis HOM05D005161 ORTHO05D006816 9.6e-28 129.0 426 26.1
Eucgr.D01493 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.3e-27 128.6 418 26.8
Os03g0141800 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D006816 1.3e-27 128.6 310 29.7
TWI63G0153 Tripterygium wilfordii HOM05D005161 ORTHO05D006816 1.3e-27 128.6 403 27.3
Eucgr.D01500 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.6e-27 128.3 421 29.0
Eucgr.D00371 Eucalyptus grandis HOM05D005161 ORTHO05D006816 8.1e-27 125.9 304 30.6
Eucgr.D00381 Eucalyptus grandis HOM05D005161 ORTHO05D006816 4.0e-26 123.6 279 32.6
Os02g0297200 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D006816 4.0e-26 123.6 432 26.9
Eucgr.L00328 Eucalyptus grandis HOM05D005161 ORTHO05D006816 2.6e-25 120.9 440 27.3
COL.COLO4_31730 Corchorus olitorius HOM05D005161 ORTHO05D006816 4.5e-25 120.2 421 27.6
Eucgr.D01108 Eucalyptus grandis HOM05D005161 ORTHO05D006816 4.5e-25 120.2 405 27.4
Eucgr.D00386 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.0e-24 119.0 374 29.1
MBI18_g25250_MAGBIO Magnolia biondii HOM05D005161 ORTHO05D006816 1.0e-24 119.0 441 28.6
Eucgr.D00400 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.3e-24 118.6 305 32.5
Eucgr.L00335 Eucalyptus grandis HOM05D005161 ORTHO05D006816 2.2e-24 117.9 412 26.2
Eucgr.D00388 Eucalyptus grandis HOM05D005161 ORTHO05D006816 3.8e-24 117.1 290 32.4
Eucgr.D01109 Eucalyptus grandis HOM05D005161 ORTHO05D006816 3.8e-24 117.1 405 27.9
Eucgr.D01497 Eucalyptus grandis HOM05D005161 ORTHO05D006816 3.8e-24 117.1 369 28.5
Zm00001eb341380 Zea mays HOM05D005161 ORTHO05D006816 3.8e-24 117.1 328 33.8
Eucgr.D01495 Eucalyptus grandis HOM05D005161 ORTHO05D006816 6.5e-24 116.3 430 27.0
QL04p088669 Quercus lobata HOM05D005161 ORTHO05D006816 1.1e-23 115.5 396 28.5
Eucgr.D00808 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.4e-23 115.2 198 35.9
MBI18_g18530_MAGBIO Magnolia biondii HOM05D005161 ORTHO05D006816 1.4e-23 115.2 440 28.6
TWI38G0750 Tripterygium wilfordii HOM05D005161 ORTHO05D006816 4.2e-23 113.6 411 26.0
Eucgr.D00403 Eucalyptus grandis HOM05D005161 ORTHO05D006816 7.1e-23 112.8 395 26.8
Zm00001eb283300 Zea mays HOM05D005161 ORTHO05D006816 1.2e-22 112.1 431 27.4
MBI18_g42473_MAGBIO Magnolia biondii HOM05D005161 ORTHO05D006816 1.6e-22 111.7 321 27.1
Eucgr.D00362 Eucalyptus grandis HOM05D005161 ORTHO05D006816 7.9e-22 109.4 410 27.8
Eucgr.D00368 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.3e-21 108.6 273 31.1
Eucgr.D00378 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.3e-21 108.6 263 31.2
MBI18_g01412_MAGBIO Magnolia biondii HOM05D005161 ORTHO05D006816 3.0e-21 107.5 298 30.9
Zm00001eb352900 Zea mays HOM05D005161 ORTHO05D006816 3.9e-21 107.1 459 25.3
MBI18_g12380_MAGBIO Magnolia biondii HOM05D005161 ORTHO05D006816 6.7e-21 106.3 259 30.9
TWI38G1862 Tripterygium wilfordii HOM05D005161 ORTHO05D006816 6.7e-21 106.3 408 25.0
Eucgr.D00394 Eucalyptus grandis HOM05D005161 ORTHO05D006816 8.7e-21 105.9 408 27.0
Os11g0618700 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D006816 8.7e-21 105.9 370 26.8
Eucgr.D00380 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.5e-20 105.1 280 32.5
Eucgr.D00807 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.5e-20 105.1 195 35.4
Eucgr.D00375 Eucalyptus grandis HOM05D005161 ORTHO05D006816 3.3e-20 104.0 415 27.0
Eucgr.D01245 Eucalyptus grandis HOM05D005161 ORTHO05D006816 4.3e-20 103.6 409 25.2
Eucgr.D00397 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.6e-19 101.7 311 29.9
Os01g0373500 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D006816 1.6e-19 101.7 447 28.6
Zm00001eb369570 Zea mays HOM05D005161 ORTHO05D006816 2.1e-19 101.3 225 33.3
Eucgr.D00361 Eucalyptus grandis HOM05D005161 ORTHO05D006816 2.8e-19 100.9 236 31.4
Os05g0508500 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D006816 2.8e-19 100.9 402 25.9
Zm00001eb298730 Zea mays HOM05D005161 ORTHO05D006816 3.7e-19 100.5 378 28.3
Os11g0618850 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D006816 4.8e-19 100.1 309 29.8
Cfa000271 Carpinus fangiana HOM05D005161 ORTHO05D006816 1.8e-18 98.2 310 27.4
Eucgr.L02157 Eucalyptus grandis HOM05D005161 ORTHO05D006816 2.4e-18 97.8 225 30.7
Eucgr.D01490 Eucalyptus grandis HOM05D005161 ORTHO05D006816 4.1e-18 97.1 415 24.3
Eucgr.D00396 Eucalyptus grandis HOM05D005161 ORTHO05D006816 5.3e-18 96.7 366 26.8
Os07g0115700 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D006816 9.0e-18 95.9 231 30.7
Eucgr.D00383 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.5e-17 95.1 291 28.9
Eucgr.D00385 Eucalyptus grandis HOM05D005161 ORTHO05D006816 2.6e-17 94.4 157 35.0
Eucgr.D00809 Eucalyptus grandis HOM05D005161 ORTHO05D006816 2.6e-17 94.4 200 32.5
Os11g0618500 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D006816 4.5e-17 93.6 272 29.0
Zm00001eb118070 Zea mays HOM05D005161 ORTHO05D006816 1.0e-16 92.4 190 33.2
Eucgr.D00392 Eucalyptus grandis HOM05D005161 ORTHO05D006816 2.2e-16 91.3 182 33.5
Eucgr.D00365 Eucalyptus grandis HOM05D005161 ORTHO05D006816 3.8e-16 90.5 436 26.1
MBI18_g01409_MAGBIO Magnolia biondii HOM05D005161 ORTHO05D006816 5.0e-16 90.1 177 34.5
Os01g0143400 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D006816 5.0e-16 90.1 294 28.6
Eucgr.D00377 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.4e-15 88.6 410 24.4
Os07g0116300 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D006816 3.2e-15 87.4 431 24.1
Eucgr.L01591 Eucalyptus grandis HOM05D005161 ORTHO05D006816 5.5e-15 86.7 165 33.3
Eucgr.D00363 Eucalyptus grandis HOM05D005161 ORTHO05D006816 9.3e-15 85.9 306 26.5
Eucgr.D01478 Eucalyptus grandis HOM05D005161 ORTHO05D006816 9.3e-15 85.9 166 33.1
Manes.16G012100 Manihot esculenta HOM05D005161 ORTHO05D006816 1.2e-14 85.5 166 32.5
Eucgr.D00804 Eucalyptus grandis HOM05D005161 ORTHO05D006816 4.6e-14 83.6 268 27.2
Eucgr.D00366 Eucalyptus grandis HOM05D005161 ORTHO05D006816 7.9e-14 82.8 452 23.9
Eucgr.D00806 Eucalyptus grandis HOM05D005161 ORTHO05D006816 7.9e-14 82.8 110 40.0
MBI18_g41152_MAGBIO Magnolia biondii HOM05D005161 ORTHO05D006816 1.8e-13 81.6 122 36.9
Os01g0333600 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D037202 1.9e-12 78.2 265 27.2
Os06g0119300 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D020953 1.9e-12 78.2 307 26.7
Eucgr.D00357 Eucalyptus grandis HOM05D005161 ORTHO05D006816 5.7e-12 76.6 143 37.1
Eucgr.D01512 Eucalyptus grandis HOM05D005161 ORTHO05D006816 2.2e-11 74.7 86 43.0
Eucgr.D00117 Eucalyptus grandis HOM05D005161 ORTHO05D006816 2.8e-11 74.3 139 33.8
Os06g0122200 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D020953 2.8e-11 74.3 364 25.0
Zm00001eb128430 Zea mays HOM05D005161 ORTHO05D037202 4.8e-11 73.6 387 24.3
Os06g0119100 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D020953 2.4e-10 71.2 301 24.9
Zm00001eb112870 Zea mays HOM05D005161 ORTHO05D006816 3.1e-10 70.9 297 26.6
Zm00001eb112890 Zea mays HOM05D005161 ORTHO05D006816 3.1e-10 70.9 330 25.5
Zm00001eb269260 Zea mays HOM05D005161 ORTHO05D020953 3.1e-10 70.9 326 24.2
Zm00001eb131210 Zea mays HOM05D005161 ORTHO05D037202 4.1e-10 70.5 304 24.0
AagrBONN_evm.TU.Sc2ySwM_362.1203 Anthoceros agrestis HOM05D000432 ORTHO05D000320 6.9e-10 69.7 157 31.2
Os06g0117500 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D299793 1.2e-09 68.9 198 29.3
Os06g0120200 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D020953 2.0e-09 68.2 305 24.9
Zm00001eb299590 Zea mays HOM05D005161 ORTHO05D006816 1.7e-08 65.1 477 22.0
Os06g0121200 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D020953 2.9e-08 64.3 303 25.1
Os06g0124300 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D020953 3.8e-08 63.9 322 26.1
Os10g0482200 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D300363 3.8e-08 63.9 298 24.5
Eucgr.D00364 Eucalyptus grandis HOM05D005161 ORTHO05D006816 5.0e-08 63.5 170 27.6
Zm00001eb299610 Zea mays HOM05D005161 ORTHO05D006816 5.0e-08 63.5 193 28.0
AagrBONN_evm.TU.Sc2ySwM_117.4118 Anthoceros agrestis HOM05D000432 ORTHO05D006816 6.5e-08 63.2 222 27.5
SEGI_18601 Sequoiadendron giganteum HOM05D000432 ORTHO05D000320 6.5e-08 63.2 155 29.0
Zm00001eb117790 Zea mays HOM05D005161 ORTHO05D006816 6.5e-08 63.2 289 25.6
Zm00001eb440760 Zea mays HOM05D005161 ORTHO05D006816 8.5e-08 62.8 421 22.8
Dinv22999 Davidia involucrata HOM05D007131 ORTHO05D009026 1.9e-07 61.6 138 29.7
Zm00001eb299560 Zea mays HOM05D005161 ORTHO05D006816 4.2e-07 60.5 349 24.1
Os07g0222200 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D299467 7.2e-07 59.7 258 28.3
Zm00001eb299110 Zea mays HOM05D005161 ORTHO05D006816 1.2e-06 58.9 451 22.2
Zm00001eb299120 Zea mays HOM05D005161 ORTHO05D006816 1.2e-06 58.9 229 26.6


User provided reference genes

Program Settings