Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0167800 Oryza sativa ssp. japonica HOM05D002879 ORTHO05D002930 2.1e-36 156.0 139 100.0
Zm00001eb407710 Zea mays HOM05D002879 ORTHO05D002930 3.5e-15 85.5 139 74.8
Zm00001eb091920 Zea mays HOM05D002879 ORTHO05D002930 6.6e-14 81.3 104 82.7
Zm00001eb263060 Zea mays HOM05D002879 ORTHO05D002930 1.5e-10 70.1 62 62.9
TPR.G22164 Trifolium pratense HOM05D002879 ORTHO05D002930 4.9e-09 65.1 94 66.0
vmacro01468 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 6.4e-09 64.7 72 52.8
MBI09_g23868_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 1.1e-08 63.9 120 56.7
arahy.Tifrunner.gnm1.ann1.4DJY3R Arachis hypogaea HOM05D002879 ORTHO05D002930 1.4e-08 63.5 95 66.3
arahy.Tifrunner.gnm1.ann1.MV46JJ Arachis hypogaea HOM05D002879 ORTHO05D002930 1.4e-08 63.5 95 66.3
vmacro12405 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 4.2e-08 62.0 87 62.1
SEGI_08871 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 5.4e-08 61.6 55 56.4
CSS0043717 Camellia sinensis var. sinensis HOM05D002879 ORTHO05D002930 7.1e-08 61.2 92 65.2
Oeu046050.1 Olea europaea HOM05D002879 ORTHO05D002930 7.1e-08 61.2 89 79.8
Glyma.10G224300 Glycine max HOM05D002879 ORTHO05D002930 9.3e-08 60.8 102 60.8
Medtr1g098680 Medicago truncatula HOM05D002879 ORTHO05D002930 9.3e-08 60.8 89 59.6
vmacro01469 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 9.3e-08 60.8 117 58.1
Rhsim11G0085100 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.6e-07 60.1 146 52.1
TAR625G0538 Trochodendron aralioides HOM05D002879 ORTHO05D002930 1.6e-07 60.1 102 43.1
Sc02g0003910 Simmondsia chinensis HOM05D002879 ORTHO05D002930 2.7e-07 59.3 94 61.7
Ah.05g168060 Amaranthus hybridus HOM05D002879 ORTHO05D002930 3.5e-07 58.9 112 56.2
Sc26g0002530 Simmondsia chinensis HOM05D002879 ORTHO05D002930 6.0e-07 58.2 68 50.0
TAR625G0963 Trochodendron aralioides HOM05D002879 ORTHO05D002930 6.0e-07 58.2 102 44.1
vmacro01464 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 6.0e-07 58.2 140 50.0
vmacro23419 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 6.0e-07 58.2 140 50.0
Rhsim11G0085000 Rhododendron simsii HOM05D002879 ORTHO05D002930 7.9e-07 57.8 72 45.8
vmacro12406 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 7.9e-07 57.8 55 56.4
Nitab4.5_0001187g0090 Nicotiana tabacum HOM05D002879 ORTHO05D002930 1.0e-06 57.4 87 51.7
Zm00001eb362480 Zea mays HOM05D002879 ORTHO05D002930 1.3e-06 57.0 79 44.3
Nitab4.5_0002764g0010 Nicotiana tabacum HOM05D002879 ORTHO05D002930 1.7e-06 56.6 87 51.7
MBI09_g20569_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 2.3e-06 56.2 114 62.3
MBI09_g23867_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 2.3e-06 56.2 114 62.3
Oeu046047.1 Olea europaea HOM05D002879 ORTHO05D002930 2.3e-06 56.2 76 64.5
QL02p029929 Quercus lobata HOM05D002879 ORTHO05D002930 2.3e-06 56.2 115 52.2
PGSC0003DMG400006661 Solanum tuberosum HOM05D002879 ORTHO05D002930 3.0e-06 55.8 114 51.8
HPP92_009298 Vanilla planifolia HOM05D002879 ORTHO05D002930 3.0e-06 55.8 87 59.8
EL10Ac1g01570 Beta vulgaris HOM05D002879 ORTHO05D002930 5.1e-06 55.1 67 46.3
CAN.G264.4 Capsicum annuum HOM05D002879 ORTHO05D002930 5.1e-06 55.1 111 54.1
Cfa018310 Carpinus fangiana HOM05D002879 ORTHO05D002930 6.6e-06 54.7 87 59.8
Ca_23081_v3 Cicer arietinum L. HOM05D002879 ORTHO05D002930 6.6e-06 54.7 89 69.7
Thecc.08G154600 Theobroma cacao HOM05D002879 ORTHO05D002930 6.6e-06 54.7 100 47.0
Peaxi162Scf00599g00115 Petunia axillaris HOM05D002879 ORTHO05D002930 8.7e-06 54.3 72 62.5
Peaxi162Scf01294g00118 Petunia axillaris HOM05D002879 ORTHO05D002930 8.7e-06 54.3 90 53.3
SEGI_23588 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 8.7e-06 54.3 64 62.5
PGSC0003DMG400024093 Solanum tuberosum HOM05D002879 ORTHO05D002930 8.7e-06 54.3 50 56.0


User provided reference genes

Program Settings