Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0164000 Oryza sativa ssp. japonica HOM05D031847 ORTHO05D023043 0.0e+00 1263.1 670 100.0
Os11g0164200 Oryza sativa ssp. japonica HOM05D031847 ORTHO05D023043 3.0e-72 277.3 251 59.8
Zm00001eb091960 Zea mays HOM05D031847 ORTHO05D023043 4.3e-58 230.3 748 30.7
Zm00001eb089930 Zea mays HOM05D021954 ORTHO05D025998 2.2e-14 85.1 236 27.1
TAR633G2532 Trochodendron aralioides HOM05D008244 ORTHO05D009402 1.3e-11 75.9 258 30.2
Zm00001eb089840 Zea mays HOM05D024869 ORTHO05D030402 2.3e-11 75.1 228 33.8
TAR636G0746 Trochodendron aralioides HOM05D008244 ORTHO05D009402 6.7e-11 73.6 255 29.4
TAR636G1541 Trochodendron aralioides HOM05D008244 ORTHO05D009402 8.7e-11 73.2 256 29.3
Hma1.2p1_0305F.1_g119380 Hydrangea macrophylla HOM05D008244 ORTHO05D009402 1.1e-10 72.8 280 30.4
Zm00001eb350070 Zea mays HOM05D021954 ORTHO05D025998 1.1e-10 72.8 247 27.1
DCAR_022571 Daucus carota HOM05D008244 ORTHO05D009402 1.5e-10 72.4 282 28.4
Zm00001eb089860 Zea mays HOM05D024869 ORTHO05D030402 4.3e-10 70.9 185 33.5
Os10g0382100 Oryza sativa ssp. japonica HOM05D018870 ORTHO05D023043 4.8e-09 67.4 184 30.4
Zm00001eb326540 Zea mays HOM05D021954 ORTHO05D025998 4.8e-09 67.4 249 25.7
Zm00001eb089980 Zea mays HOM05D024869 ORTHO05D030402 6.2e-09 67.0 185 32.4
CANSAT64G2823 Cannabis sativa HOM05D008244 ORTHO05D009402 1.1e-08 66.2 259 27.8
DCAR_022572 Daucus carota HOM05D008244 ORTHO05D009402 5.8e-07 60.5 276 25.4
Zm00001eb060190 Zea mays HOM05D008244 ORTHO05D009402 5.8e-07 60.5 594 21.4
Zm00001eb312760 Zea mays HOM05D018870 ORTHO05D023043 7.6e-07 60.1 170 25.9
Zm00001eb312800 Zea mays HOM05D018870 ORTHO05D023043 7.6e-07 60.1 170 25.9
SGA_v2.0_scaffold12G06021 Striga asiatica HOM05D008244 ORTHO05D009402 1.0e-06 59.7 226 25.2
TAR636G0092 Trochodendron aralioides HOM05D008244 ORTHO05D009402 2.9e-06 58.2 193 31.6
Hma1.2p1_2166F.1_g315860 Hydrangea macrophylla HOM05D008244 ORTHO05D009402 3.8e-06 57.8 274 29.2
TAR636G0515 Trochodendron aralioides HOM05D008244 ORTHO05D009402 4.9e-06 57.4 249 29.7
Os01g0167400 Oryza sativa ssp. japonica HOM05D021954 ORTHO05D025998 6.5e-06 57.0 245 26.5


User provided reference genes

Program Settings