Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0155950 Oryza sativa ssp. japonica HOM05D009248 ORTHO05D011411 7.9e-63 243.8 142 100.0
Os06g0160000 Oryza sativa ssp. japonica HOM05D009248 ORTHO05D011411 1.1e-48 196.8 141 79.4
Zm00001eb271250 Zea mays HOM05D009248 ORTHO05D011411 3.1e-43 178.7 139 75.5
Zm00001eb376140 Zea mays HOM05D009248 ORTHO05D011411 6.9e-43 177.6 145 72.4
Zm00001eb181730 Zea mays HOM05D009248 ORTHO05D011411 7.7e-42 174.1 140 80.0
Os06g0131001 Oryza sativa ssp. japonica HOM05D009248 ORTHO05D011411 6.1e-39 164.5 135 72.6
Eucgr.H04911 Eucalyptus grandis HOM05D009248 ORTHO05D011411 4.0e-30 135.2 139 59.0
Dinv36294 Davidia involucrata HOM05D009248 ORTHO05D011411 5.3e-27 124.8 103 64.1
Cpa.g.sc55.60 Carica papaya HOM05D009248 ORTHO05D011411 1.1e-24 117.1 134 50.7
HPP92_006102 Vanilla planifolia HOM05D009248 ORTHO05D011411 1.1e-24 117.1 134 54.5
SGA_v2.0_scaffold8G04627 Striga asiatica HOM05D009248 ORTHO05D011411 2.5e-24 115.9 117 59.8
BolC2t06434H Brassica oleracea HOM05D004194 ORTHO05D005641 2.0e-21 106.3 113 53.1
SEGI_24703 Sequoiadendron giganteum HOM05D009248 ORTHO05D011411 1.7e-20 103.2 118 53.4
DCAR_004036 Daucus carota HOM05D009248 ORTHO05D011411 3.7e-20 102.1 106 51.9
FAN11G2848 Fragaria x ananassa HOM05D009248 ORTHO05D011411 3.7e-20 102.1 95 60.0
Lsat_1_v5_gn_6_48640 Lactuca sativa HOM05D002542 ORTHO05D005078 1.1e-19 100.5 115 53.0
arahy.Tifrunner.gnm1.ann1.RU7JNP Arachis hypogaea HOM05D009248 ORTHO05D011411 4.5e-18 95.1 116 50.0
Hma1.2p1_0237F.1_g099550 Hydrangea macrophylla HOM05D009248 ORTHO05D011411 7.7e-18 94.4 109 54.1
Ciclev10030158m.g Citrus clementina HOM05D009248 ORTHO05D011411 1.9e-16 89.7 103 45.6
Atru.chr13.1919 Acer truncatum HOM05D009248 ORTHO05D011411 4.2e-16 88.6 136 41.2
SGA_v2.0_scaffold326G48753 Striga asiatica HOM05D009248 ORTHO05D011411 1.0e-14 84.0 85 54.1
Thecc.05G224900 Theobroma cacao HOM05D009248 ORTHO05D011411 6.3e-12 74.7 93 40.9
Hma1.2p1_0019F.1_g013770 Hydrangea macrophylla HOM05D009248 ORTHO05D011411 1.4e-11 73.6 136 38.2
Dinv05186 Davidia involucrata HOM05D002878 ORTHO05D003649 3.1e-11 72.4 77 55.8
Os04g0450825 Oryza sativa ssp. japonica HOM05D009248 ORTHO05D011411 2.9e-09 65.9 93 46.2
Os03g0390633 Oryza sativa ssp. japonica HOM05D009248 ORTHO05D011411 6.6e-09 64.7 95 47.4
Actinidia21566 Actinidia chinensis HOM05D009248 ORTHO05D011411 1.5e-08 63.5 94 50.0
HPP92_027065 Vanilla planifolia HOM05D009248 ORTHO05D011411 3.3e-08 62.4 62 56.5
Os02g0457175 Oryza sativa ssp. japonica HOM05D009248 ORTHO05D011411 5.6e-08 61.6 56 62.5
EL10Ac4g08271 Beta vulgaris HOM05D000288 ORTHO05D000173 1.6e-07 60.1 93 34.4
Os02g0457325 Oryza sativa ssp. japonica HOM05D009248 ORTHO05D011411 1.8e-06 56.6 56 58.9
Hma1.2p1_1465F.1_g285300 Hydrangea macrophylla HOM05D031408 ORTHO05D029949 2.3e-06 56.2 47 63.8
Eucgr.H04906 Eucalyptus grandis HOM05D009248 ORTHO05D011411 3.0e-06 55.8 45 66.7
Oeu022030.2 Olea europaea HOM05D009248 ORTHO05D011411 3.0e-06 55.8 56 55.4


User provided reference genes

Program Settings