Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0154900 Oryza sativa ssp. japonica HOM05D005512 ORTHO05D006716 2.0e-193 679.1 395 100.0
Zm00001eb197160 Zea mays HOM05D005512 ORTHO05D006716 3.4e-71 273.1 370 57.6
Zm00001eb406920 Zea mays HOM05D005512 ORTHO05D006716 2.6e-39 167.2 195 62.6
Zm00001eb092580 Zea mays HOM05D005512 ORTHO05D006716 1.1e-29 135.2 232 51.3
Os02g0578500 Oryza sativa ssp. japonica HOM05D005512 ORTHO05D006716 1.3e-22 111.7 75 80.0
TAR623G0330 Trochodendron aralioides HOM05D005512 ORTHO05D006716 3.3e-18 97.1 174 42.5
GSVIVG01033811001 Vitis vinifera HOM05D005512 ORTHO05D006716 1.8e-16 91.3 198 39.9
CDE08G0293 Ceratophyllum demersum HOM05D005512 ORTHO05D006716 5.3e-16 89.7 82 59.8
CARHR020060 Cardamine hirsuta HOM05D005512 ORTHO05D006716 9.0e-16 89.0 184 40.8
COL.COLO4_29783 Corchorus olitorius HOM05D005512 ORTHO05D006716 1.2e-15 88.6 111 54.1
CANSAT80G2511 Cannabis sativa HOM05D005512 ORTHO05D006716 1.5e-15 88.2 132 47.7
Phvul.001G188300 Phaseolus vulgaris HOM05D005512 ORTHO05D006716 1.5e-15 88.2 191 40.8
Sed0026834 Sechium edule HOM05D005512 ORTHO05D006716 1.5e-15 88.2 264 35.2
CDE06G1506 Ceratophyllum demersum HOM05D000077 ORTHO05D002348 2.0e-15 87.8 82 59.8
Thecc.05G085400 Theobroma cacao HOM05D005512 ORTHO05D006716 2.0e-15 87.8 98 55.1
Manes.09G059527 Manihot esculenta HOM05D005512 ORTHO05D006716 3.4e-15 87.0 109 52.3
Nn2g14077 Nelumbo nucifera HOM05D005512 ORTHO05D006716 3.4e-15 87.0 200 38.5
Gorai.009G405400 Gossypium raimondii HOM05D005512 ORTHO05D006716 7.7e-15 85.9 107 50.5
Lalb_Chr20g0112081 Lupinus albus HOM05D005512 ORTHO05D006716 7.7e-15 85.9 94 54.3
HPP92_009043 Vanilla planifolia HOM05D005512 ORTHO05D006716 7.7e-15 85.9 154 46.1
Gohir.D04G102100 Gossypium hirsutum HOM05D005512 ORTHO05D006716 1.0e-14 85.5 107 50.5
QL07p039701 Quercus lobata HOM05D005512 ORTHO05D006716 1.3e-14 85.1 147 42.9
Sabra06G0089500 Salix brachista HOM05D005512 ORTHO05D006716 1.3e-14 85.1 307 35.5
VMungo1383G0830 Vigna mungo HOM05D005512 ORTHO05D006716 1.3e-14 85.1 191 38.7
CsaV3_3G037090 Cucumis sativus L. HOM05D005512 ORTHO05D006716 1.7e-14 84.7 162 41.4
Cc08_g02550 Coffea canephora HOM05D005512 ORTHO05D006716 2.9e-14 84.0 82 61.0
Thhalv10009681m.g Eutrema salsugineum HOM05D005512 ORTHO05D006716 2.9e-14 84.0 107 48.6
Gohir.A04G064600 Gossypium hirsutum HOM05D005512 ORTHO05D006716 1.1e-13 82.0 107 48.6
BcaB03g14441 Brassica carinata HOM05D005512 ORTHO05D006716 1.4e-13 81.6 283 32.5
Glyma.19G193400 Glycine max HOM05D005512 ORTHO05D006716 1.4e-13 81.6 132 46.2
Prupe.7G114400 Prunus persica HOM05D005512 ORTHO05D006716 1.4e-13 81.6 153 42.5
Nitab4.5_0011780g0020 Nicotiana tabacum HOM05D005512 ORTHO05D006716 1.9e-13 81.3 156 42.9
CiPaw.09G010900 Carya illinoinensis HOM05D005512 ORTHO05D006716 2.5e-13 80.9 129 48.1
Hma1.2p1_0084F.1_g043460 Hydrangea macrophylla HOM05D005512 ORTHO05D006716 2.5e-13 80.9 232 37.5
Aqoxy4G02826 Aquilegia oxysepala HOM05D005512 ORTHO05D006716 4.2e-13 80.1 195 38.5
CAN.G397.46 Capsicum annuum HOM05D005512 ORTHO05D006716 4.2e-13 80.1 145 46.2
Glyma.03G193300 Glycine max HOM05D005512 ORTHO05D006716 5.5e-13 79.7 112 48.2
AUR62033525 Chenopodium quinoa HOM05D005512 ORTHO05D006716 7.2e-13 79.3 184 37.0
Sp1g17370 Schrenkiella parvula HOM05D005512 ORTHO05D006716 7.2e-13 79.3 184 38.0
CiPaw.10G007200 Carya illinoinensis HOM05D005512 ORTHO05D006716 9.4e-13 79.0 191 39.8
Nitab4.5_0005756g0030 Nicotiana tabacum HOM05D005512 ORTHO05D006716 9.4e-13 79.0 154 42.2
Peaxi162Scf00752g00310 Petunia axillaris HOM05D005512 ORTHO05D006716 1.2e-12 78.6 157 41.4
Peaxi162Scf36127g00005 Petunia axillaris HOM05D005512 ORTHO05D006716 1.2e-12 78.6 157 41.4
Haze_19571 Corylus avellana HOM05D005512 ORTHO05D006716 1.6e-12 78.2 164 37.2
Lj3A1000G63 Lonicera japonica HOM05D005512 ORTHO05D006716 1.6e-12 78.2 94 53.2
Sopen09g004520 Solanum pennellii HOM05D005512 ORTHO05D006716 2.1e-12 77.8 190 38.9
EL10Ac7g16952 Beta vulgaris HOM05D005512 ORTHO05D006716 2.7e-12 77.4 75 57.3
THA.LOC104804992 Tarenaya hassleriana HOM05D005512 ORTHO05D006716 2.7e-12 77.4 191 40.3
TWI74G0342 Tripterygium wilfordii HOM05D005512 ORTHO05D006716 2.7e-12 77.4 185 39.5
Cfa016575 Carpinus fangiana HOM05D005512 ORTHO05D006716 3.6e-12 77.0 164 39.6
MD12G1022300 Malus domestica HOM05D005512 ORTHO05D006716 6.1e-12 76.3 153 41.2
RcHm_v2.0_Chr3g0472661 Rosa chinensis HOM05D005512 ORTHO05D006716 1.0e-11 75.5 198 36.9
ClCG10G019160 Citrullus lanatus HOM05D005512 ORTHO05D006716 1.4e-11 75.1 324 31.8
Dinv31662 Davidia involucrata HOM05D005512 ORTHO05D006716 2.3e-11 74.3 254 34.6
Potri.006G114600 Populus trichocarpa HOM05D005512 ORTHO05D006716 2.3e-11 74.3 285 34.7
AT1G19490 Arabidopsis thaliana HOM05D005512 ORTHO05D006716 3.0e-11 73.9 184 34.2
Actinidia10388 Actinidia chinensis HOM05D005512 ORTHO05D006716 3.9e-11 73.6 87 51.7
AUR62028570 Chenopodium quinoa HOM05D005512 ORTHO05D006716 3.9e-11 73.6 183 37.2
FAN14G2174 Fragaria x ananassa HOM05D005512 ORTHO05D006716 3.9e-11 73.6 222 34.7
Nn6g34983 Nelumbo nucifera HOM05D005512 ORTHO05D006716 3.9e-11 73.6 333 32.4
Nitab4.5_0000794g0130 Nicotiana tabacum HOM05D005512 ORTHO05D006716 3.9e-11 73.6 173 41.6
Solyc09g009760.1 Solanum lycopersicum HOM05D005512 ORTHO05D006716 3.9e-11 73.6 114 46.5
TWI53G0330 Tripterygium wilfordii HOM05D005512 ORTHO05D006716 3.9e-11 73.6 185 40.0
Sc20g0006160 Simmondsia chinensis HOM05D005512 ORTHO05D006716 5.1e-11 73.2 254 31.9
PSO384G3501 Papaver somniferum HOM05D005512 ORTHO05D006716 6.7e-11 72.8 204 36.3
ECA238G0726 Erigeron canadensis HOM05D000284 ORTHO05D001229 8.8e-11 72.4 156 40.4
Lj1g0021236 Lotus japonicus HOM05D005512 ORTHO05D006716 1.1e-10 72.0 350 29.7
Oeu056908.1 Olea europaea HOM05D005512 ORTHO05D006716 1.1e-10 72.0 155 40.0
Cpa.g.sc5.51 Carica papaya HOM05D005512 ORTHO05D006716 2.0e-10 71.2 310 31.3
MBI17_g31309_MAGBIO Magnolia biondii HOM05D005512 ORTHO05D006716 2.0e-10 71.2 295 33.9
PSO339G0823 Papaver somniferum HOM05D005512 ORTHO05D006716 2.0e-10 71.2 204 34.3
MSTRG.10360 Avicennia marina HOM05D005512 ORTHO05D006716 4.3e-10 70.1 147 42.2
Dinv21230 Davidia involucrata HOM05D005512 ORTHO05D006716 4.3e-10 70.1 299 32.4
MD14G1019200 Malus domestica HOM05D005512 ORTHO05D006716 4.3e-10 70.1 211 36.0
arahy.Tifrunner.gnm1.ann1.EPRD9B Arachis hypogaea HOM05D005512 ORTHO05D006716 5.7e-10 69.7 219 33.3
MELO3C009455.2 Cucumis melo HOM05D005512 ORTHO05D006716 5.7e-10 69.7 285 31.6
Atru.chr8.1592 Acer truncatum HOM05D005512 ORTHO05D006716 9.7e-10 68.9 340 29.7
FvH4_6g18250 Fragaria vesca HOM05D005512 ORTHO05D006716 1.3e-09 68.6 237 32.9
FAN14G2179 Fragaria x ananassa HOM05D005512 ORTHO05D006716 1.3e-09 68.6 237 32.9
FAN09G0635 Fragaria x ananassa HOM05D005512 ORTHO05D006716 2.2e-09 67.8 253 31.6
Lsat_1_v5_gn_6_66321 Lactuca sativa HOM05D005512 ORTHO05D006716 2.2e-09 67.8 126 44.4
PGR142G2241 Punica granatum HOM05D005512 ORTHO05D006716 2.2e-09 67.8 193 37.8
Hund14853 Selenicereus undatus HOM05D005512 ORTHO05D006716 2.2e-09 67.8 227 32.6
AL1G32240 Arabidopsis lyrata HOM05D005512 ORTHO05D006716 3.7e-09 67.0 307 29.0
DCAR_009151 Daucus carota HOM05D005512 ORTHO05D006716 4.8e-09 66.6 156 39.1
Ciclev10013541m.g Citrus clementina HOM05D005512 ORTHO05D006716 6.3e-09 66.2 341 29.3
Lsat_1_v5_gn_2_22561 Lactuca sativa HOM05D005512 ORTHO05D006716 6.3e-09 66.2 235 34.5
DCAR_020766 Daucus carota HOM05D005512 ORTHO05D006716 1.4e-08 65.1 157 38.2
HanXRQChr16g0518951 Helianthus annuus HOM05D005512 ORTHO05D006716 1.4e-08 65.1 271 32.5
Actinidia08422 Actinidia chinensis HOM05D005512 ORTHO05D006716 1.8e-08 64.7 179 36.9
PGSC0003DMG400028166 Solanum tuberosum HOM05D005512 ORTHO05D006716 4.1e-08 63.5 65 55.4
C05p17910 Brassica napus HOM05D005512 ORTHO05D006716 6.9e-08 62.8 369 28.2
FAN02G2015 Fragaria x ananassa HOM05D005512 ORTHO05D006716 6.9e-08 62.8 236 32.6
unitig_22.g5122 Utricularia gibba HOM05D005512 ORTHO05D006716 6.9e-08 62.8 72 51.4
CSS0012282 Camellia sinensis var. sinensis HOM05D005512 ORTHO05D006716 1.5e-07 61.6 73 54.8
FAN05G0202 Fragaria x ananassa HOM05D005512 ORTHO05D006716 1.5e-07 61.6 238 32.4
Duzib128G1345 Durio zibethinus HOM05D005512 ORTHO05D006716 2.6e-07 60.8 166 38.0
Aa31LG7G4150 Aethionema arabicum HOM05D005512 ORTHO05D006716 4.5e-07 60.1 368 28.5
BraA06t24676Z Brassica rapa HOM05D005512 ORTHO05D006716 7.7e-07 59.3 367 27.0
A06p15670 Brassica napus HOM05D005512 ORTHO05D006716 1.3e-06 58.5 368 27.7
Carub.0001s1906 Capsella rubella HOM05D005512 ORTHO05D006716 1.7e-06 58.2 310 28.4
Duzib093G0027 Durio zibethinus HOM05D005512 ORTHO05D006716 2.2e-06 57.8 96 44.8
SMO351G0354 Selaginella moellendorffii HOM05D005512 ORTHO05D006716 2.2e-06 57.8 128 36.7
AagrBONN_evm.TU.Sc2ySwM_117.2312 Anthoceros agrestis HOM05D005512 ORTHO05D006716 3.8e-06 57.0 143 37.1
Pp3c17_11650 Physcomitrium patens HOM05D005512 ORTHO05D006716 5.0e-06 56.6 157 38.2
Solyc10g083380.2 Solanum lycopersicum HOM05D005512 ORTHO05D006716 5.0e-06 56.6 117 41.0


User provided reference genes

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