Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0153000 Oryza sativa ssp. japonica HOM05D002916 ORTHO05D003152 2.3e-55 218.8 122 100.0
Zm00001eb092670 Zea mays HOM05D002916 ORTHO05D003152 2.4e-20 102.4 122 51.6
Zm00001eb197070 Zea mays HOM05D002916 ORTHO05D003152 6.6e-18 94.4 127 49.6
Os12g0153200 Oryza sativa ssp. japonica HOM05D002916 ORTHO05D003152 2.8e-16 89.0 128 47.7
Nn6g34891 Nelumbo nucifera HOM05D002916 ORTHO05D003152 6.0e-11 71.2 62 56.5
Aqoxy4G02773 Aquilegia oxysepala HOM05D002916 ORTHO05D003152 5.1e-10 68.2 157 35.7
Atru.chr8.1528 Acer truncatum HOM05D002916 ORTHO05D003152 6.7e-10 67.8 58 53.4
Atru.chr8.1530 Acer truncatum HOM05D002916 ORTHO05D003152 8.7e-10 67.4 157 31.2
Nn2g14164 Nelumbo nucifera HOM05D002916 ORTHO05D003152 1.9e-09 66.2 62 50.0
RcHm_v2.0_Chr3g0473821 Rosa chinensis HOM05D002916 ORTHO05D003152 5.6e-09 64.7 62 54.8
FvH4_6g18810 Fragaria vesca HOM05D002916 ORTHO05D003152 1.3e-08 63.5 62 54.8
FAN05G3486 Fragaria x ananassa HOM05D002916 ORTHO05D003152 1.3e-08 63.5 62 54.8
FAN05G4254 Fragaria x ananassa HOM05D002916 ORTHO05D003152 1.3e-08 63.5 62 54.8
FAN14G1204 Fragaria x ananassa HOM05D002916 ORTHO05D003152 1.3e-08 63.5 62 54.8
FAN02G4366 Fragaria x ananassa HOM05D002916 ORTHO05D003152 1.6e-08 63.2 62 53.2
Ciclev10012941m.g Citrus clementina HOM05D002916 ORTHO05D003152 2.1e-08 62.8 60 53.3
Dinv31688 Davidia involucrata HOM05D004140 ORTHO05D006116 2.1e-08 62.8 61 52.5
Prupe.7G109500 Prunus persica HOM05D002916 ORTHO05D003152 2.8e-08 62.4 61 50.8
Gohir.D01G195600 Gossypium hirsutum HOM05D002916 ORTHO05D003152 6.2e-08 61.2 162 30.9
Potri.006G213100 Populus trichocarpa HOM05D002916 ORTHO05D003152 6.2e-08 61.2 63 52.4
Oeu047865.1 Olea europaea HOM05D002916 ORTHO05D003152 8.1e-08 60.8 62 51.6
Rhsim03G0074900 Rhododendron simsii HOM05D002916 ORTHO05D003152 8.1e-08 60.8 67 46.3
COL.COLO4_29727 Corchorus olitorius HOM05D002916 ORTHO05D003152 1.1e-07 60.5 66 48.5
TAR623G0367 Trochodendron aralioides HOM05D002916 ORTHO05D003152 1.8e-07 59.7 65 44.6
MSTRG.26638 Avicennia marina HOM05D002916 ORTHO05D003152 2.4e-07 59.3 94 41.5
Gorai.002G239800 Gossypium raimondii HOM05D002916 ORTHO05D003152 2.4e-07 59.3 162 30.2
Medtr7g104680 Medicago truncatula HOM05D002916 ORTHO05D003152 4.0e-07 58.5 132 31.8
Actinidia05426 Actinidia chinensis HOM05D002916 ORTHO05D003152 5.3e-07 58.2 68 44.1
Glyma.13G153800 Glycine max HOM05D002916 ORTHO05D003152 5.3e-07 58.2 64 45.3
Thecc.05G089800 Theobroma cacao HOM05D002916 ORTHO05D003152 5.3e-07 58.2 64 43.8
ECA236G4089 Erigeron canadensis HOM05D002916 ORTHO05D003152 6.9e-07 57.8 69 42.0
Actinidia31270 Actinidia chinensis HOM05D002916 ORTHO05D003152 1.2e-06 57.0 64 51.6
Oeu056929.1 Olea europaea HOM05D002916 ORTHO05D003152 1.2e-06 57.0 62 50.0
Cc06_g05820 Coffea canephora HOM05D002916 ORTHO05D003152 1.5e-06 56.6 67 43.3
Duzib093G0112 Durio zibethinus HOM05D002916 ORTHO05D003152 1.5e-06 56.6 62 48.4
Potri.016G079700 Populus trichocarpa HOM05D002916 ORTHO05D003152 1.5e-06 56.6 60 53.3
TPR.G23310 Trifolium pratense HOM05D002916 ORTHO05D003152 2.0e-06 56.2 135 32.6
Ca_09009_v3 Cicer arietinum L. HOM05D002916 ORTHO05D003152 2.6e-06 55.8 159 31.4
Gohir.A01G206200 Gossypium hirsutum HOM05D002916 ORTHO05D003152 2.6e-06 55.8 164 29.3
MD14G1023400 Malus domestica HOM05D002916 ORTHO05D003152 2.6e-06 55.8 65 49.2
HPP92_023010 Vanilla planifolia HOM05D057963 ORTHO05D003152 2.6e-06 55.8 63 47.6
Eucgr.A02661 Eucalyptus grandis HOM05D002916 ORTHO05D003152 3.4e-06 55.5 128 35.2
Glyma.10G072400 Glycine max HOM05D002916 ORTHO05D003152 3.4e-06 55.5 67 40.3
Glyma.19G194943 Glycine max HOM05D002916 ORTHO05D003152 3.4e-06 55.5 60 46.7
MD12G1036700 Malus domestica HOM05D002916 ORTHO05D003152 3.4e-06 55.5 64 50.0
TWI74G0225 Tripterygium wilfordii HOM05D002916 ORTHO05D003152 3.4e-06 55.5 64 50.0
CiPaw.06G042000 Carya illinoinensis HOM05D002916 ORTHO05D003152 5.8e-06 54.7 63 46.0
Duzib128G0442 Durio zibethinus HOM05D002916 ORTHO05D003152 5.8e-06 54.7 61 42.6
Glyma.03G196300 Glycine max HOM05D002916 ORTHO05D003152 5.8e-06 54.7 60 48.3
Manes.09G055000 Manihot esculenta HOM05D002916 ORTHO05D003152 5.8e-06 54.7 154 29.2
Manes.08G025700 Manihot esculenta HOM05D002916 ORTHO05D003152 7.6e-06 54.3 159 30.8


User provided reference genes

Program Settings