Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0145700 Oryza sativa ssp. japonica HOM05D004797 ORTHO05D005752 1.6e-181 639.4 352 100.0
Os12g0143200 Oryza sativa ssp. japonica HOM05D004797 ORTHO05D005752 1.4e-164 583.2 341 93.3
Os11g0146500 Oryza sativa ssp. japonica HOM05D004797 ORTHO05D005752 2.2e-154 549.3 288 97.9
Zm00001eb092900 Zea mays HOM05D004797 ORTHO05D005752 1.1e-97 360.9 352 60.8
Zm00001eb380670 Zea mays HOM05D008064 ORTHO05D005752 8.5e-74 281.6 186 71.0
Lsat_1_v5_gn_1_77340 Lactuca sativa HOM05D004797 ORTHO05D005752 2.5e-70 270.0 233 56.2
CARHR041620 Cardamine hirsuta HOM05D004797 ORTHO05D005752 4.3e-70 269.2 232 57.8
GSVIVG01025234001 Vitis vinifera HOM05D004797 ORTHO05D005752 7.4e-70 268.5 234 56.4
AT1G51450 Arabidopsis thaliana HOM05D004797 ORTHO05D005752 2.2e-69 266.9 230 57.0
SGA_v2.0_scaffold42G16076 Striga asiatica HOM05D004797 ORTHO05D005752 2.8e-69 266.5 234 57.7
Carub.0001s4032 Capsella rubella HOM05D004797 ORTHO05D005752 1.1e-68 264.6 231 56.3
Peaxi162Scf00004g00318 Petunia axillaris HOM05D004797 ORTHO05D005752 1.1e-68 264.6 236 55.5
Aa31LG10G3600 Aethionema arabicum HOM05D004797 ORTHO05D005752 3.1e-68 263.1 231 55.4
Thhalv10011431m.g Eutrema salsugineum HOM05D004797 ORTHO05D005752 3.1e-68 263.1 231 55.4
TAR623G0783 Trochodendron aralioides HOM05D004797 ORTHO05D005752 3.1e-68 263.1 231 56.3
RcHm_v2.0_Chr5g0052831 Rosa chinensis HOM05D004797 ORTHO05D005752 4.1e-68 262.7 234 55.6
THA.LOC104817914 Tarenaya hassleriana HOM05D004797 ORTHO05D005752 4.1e-68 262.7 231 54.5
Gohir.D09G109400 Gossypium hirsutum HOM05D004797 ORTHO05D005752 5.3e-68 262.3 231 56.7
Gorai.006G127000 Gossypium raimondii HOM05D004797 ORTHO05D005752 5.3e-68 262.3 231 56.7
AL1G59340 Arabidopsis lyrata HOM05D004797 ORTHO05D005752 1.2e-67 261.2 230 56.1
Gohir.A09G112900 Gossypium hirsutum HOM05D004797 ORTHO05D005752 1.5e-67 260.8 232 56.0
ECA248G3299 Erigeron canadensis HOM05D004797 ORTHO05D005752 2.6e-67 260.0 233 53.6
MSTRG.18441 Avicennia marina HOM05D004797 ORTHO05D005752 3.4e-67 259.6 233 56.7
Migut.N02340 Erythranthe guttata HOM05D004797 ORTHO05D005752 3.4e-67 259.6 207 59.9
Nn2g15211 Nelumbo nucifera HOM05D004797 ORTHO05D005752 3.4e-67 259.6 234 53.8
TWI60G0872 Tripterygium wilfordii HOM05D004797 ORTHO05D005752 5.9e-67 258.8 235 54.9
TAR633G1546 Trochodendron aralioides HOM05D004797 ORTHO05D005752 5.9e-67 258.8 233 54.1
MSTRG.12462 Avicennia marina HOM05D004797 ORTHO05D005752 7.7e-67 258.5 233 57.5
COL.COLO4_28767 Corchorus olitorius HOM05D004797 ORTHO05D005752 1.0e-66 258.1 234 54.7
Aqoxy2G00222 Aquilegia oxysepala HOM05D004797 ORTHO05D005752 2.9e-66 256.5 258 50.8
Eucgr.J00747 Eucalyptus grandis HOM05D004797 ORTHO05D005752 2.9e-66 256.5 234 56.0
Manes.14G004000 Manihot esculenta HOM05D004797 ORTHO05D005752 2.9e-66 256.5 232 54.3
Potri.009G051400 Populus trichocarpa HOM05D004797 ORTHO05D005752 2.9e-66 256.5 232 55.2
Sp1g38120 Schrenkiella parvula HOM05D004797 ORTHO05D005752 6.5e-66 255.4 231 54.1
Nn7g36315 Nelumbo nucifera HOM05D004797 ORTHO05D005752 1.4e-65 254.2 231 55.4
Dinv36236 Davidia involucrata HOM05D004797 ORTHO05D005752 1.9e-65 253.8 232 53.4
Thecc.09G237700 Theobroma cacao HOM05D004797 ORTHO05D005752 1.9e-65 253.8 231 55.4
Potri.001G256000 Populus trichocarpa HOM05D004797 ORTHO05D005752 2.5e-65 253.4 231 54.5
CAN.G717.4 Capsicum annuum HOM05D004797 ORTHO05D005752 3.2e-65 253.1 232 53.9
Nitab4.5_0002451g0050 Nicotiana tabacum HOM05D004797 ORTHO05D005752 3.2e-65 253.1 194 59.8
TWI32G1158 Tripterygium wilfordii HOM05D004797 ORTHO05D005752 3.2e-65 253.1 234 52.1
HPP92_012324 Vanilla planifolia HOM05D004797 ORTHO05D005752 3.2e-65 253.1 232 52.6
Ciclev10014796m.g Citrus clementina HOM05D004797 ORTHO05D005752 4.2e-65 252.7 231 55.0
PSO384G3237 Papaver somniferum HOM05D004797 ORTHO05D005752 4.2e-65 252.7 237 51.5
FAN21G1390 Fragaria x ananassa HOM05D004797 ORTHO05D005752 5.5e-65 252.3 231 55.8
Hund22004 Selenicereus undatus HOM05D004797 ORTHO05D005752 5.5e-65 252.3 233 54.9
Atru.chr3.2667 Acer truncatum HOM05D004797 ORTHO05D005752 7.2e-65 251.9 230 53.9
BcaB07g33593 Brassica carinata HOM05D004797 ORTHO05D005752 7.2e-65 251.9 199 60.8
Sc16g0011300 Simmondsia chinensis HOM05D004797 ORTHO05D005752 7.2e-65 251.9 234 51.7
PGSC0003DMG400029996 Solanum tuberosum HOM05D004797 ORTHO05D005752 7.2e-65 251.9 203 58.1
arahy.Tifrunner.gnm1.ann1.BIMS8G Arachis hypogaea HOM05D004797 ORTHO05D005752 1.2e-64 251.1 196 59.2
Cpa.g.sc84.33 Carica papaya HOM05D004797 ORTHO05D005752 1.2e-64 251.1 231 55.0
MD03G1172400 Malus domestica HOM05D004797 ORTHO05D005752 1.2e-64 251.1 194 61.9
Oeu025884.1 Olea europaea HOM05D004797 ORTHO05D005752 1.2e-64 251.1 193 60.6
Solyc11g065370.3 Solanum lycopersicum HOM05D004797 ORTHO05D005752 1.2e-64 251.1 231 53.2
Duzib170G0427 Durio zibethinus HOM05D004797 ORTHO05D005752 1.6e-64 250.8 231 55.0
FAN16G3639 Fragaria x ananassa HOM05D004797 ORTHO05D005752 1.6e-64 250.8 231 55.0
MD11G1190300 Malus domestica HOM05D004797 ORTHO05D005752 2.1e-64 250.4 193 61.1
C06p06610 Brassica napus HOM05D004797 ORTHO05D005752 2.7e-64 250.0 231 54.1
Dinv22162 Davidia involucrata HOM05D004797 ORTHO05D005752 2.7e-64 250.0 231 53.2
Nitab4.5_0006617g0070 Nicotiana tabacum HOM05D004797 ORTHO05D005752 2.7e-64 250.0 232 51.7
Sopen11g025150 Solanum pennellii HOM05D004797 ORTHO05D005752 2.7e-64 250.0 203 57.6
arahy.Tifrunner.gnm1.ann1.IKU8UZ Arachis hypogaea HOM05D004797 ORTHO05D005752 3.6e-64 249.6 196 58.7
AUR62000146 Chenopodium quinoa HOM05D004797 ORTHO05D005752 3.6e-64 249.6 213 54.9
ClCG03G013100 Citrullus lanatus HOM05D004797 ORTHO05D005752 3.6e-64 249.6 192 61.5
MELO3C015173.2 Cucumis melo HOM05D004797 ORTHO05D005752 3.6e-64 249.6 192 61.5
Medtr4g076980 Medicago truncatula HOM05D004797 ORTHO05D005752 3.6e-64 249.6 196 59.2
CsaV3_1G042960 Cucumis sativus L. HOM05D004797 ORTHO05D005752 4.7e-64 249.2 192 61.5
Prupe.4G254200 Prunus persica HOM05D004797 ORTHO05D005752 6.1e-64 248.8 193 61.1
PSO339G1463 Papaver somniferum HOM05D004797 ORTHO05D005752 7.9e-64 248.4 237 50.6
CANSAT54G0946 Cannabis sativa HOM05D004797 ORTHO05D005752 1.0e-63 248.1 232 53.9
Ah.06g193930 Amaranthus hybridus HOM05D004797 ORTHO05D005752 1.4e-63 247.7 193 60.1
BcaC08g43313 Brassica carinata HOM05D004797 ORTHO05D005752 1.4e-63 247.7 231 53.7
FAN11G3886 Fragaria x ananassa HOM05D004797 ORTHO05D005752 1.4e-63 247.7 194 60.3
Hma1.2p1_2280F.1_g318720 Hydrangea macrophylla HOM05D004797 ORTHO05D005752 1.8e-63 247.3 235 52.8
MBI17_g23181_MAGBIO Magnolia biondii HOM05D004797 ORTHO05D005752 1.8e-63 247.3 189 61.4
PGR142G0717 Punica granatum HOM05D004797 ORTHO05D005752 1.8e-63 247.3 234 51.7
Aqoxy1G00230 Aquilegia oxysepala HOM05D004797 ORTHO05D005752 2.3e-63 246.9 234 51.3
AUR62019327 Chenopodium quinoa HOM05D004797 ORTHO05D005752 2.3e-63 246.9 197 56.9
Eucgr.B03708 Eucalyptus grandis HOM05D004797 ORTHO05D005752 2.3e-63 246.9 233 52.8
MBI19_g09239_MAGBIO Magnolia biondii HOM05D004797 ORTHO05D005752 3.0e-63 246.5 231 54.5
CiPaw.14G117300 Carya illinoinensis HOM05D004797 ORTHO05D005752 3.9e-63 246.1 231 53.2
vmacro14270 Vaccinium macrocarpon HOM05D004797 ORTHO05D005752 5.1e-63 245.7 231 53.7
Actinidia11672 Actinidia chinensis HOM05D004797 ORTHO05D005752 6.7e-63 245.4 233 51.9
Migut.D00622 Erythranthe guttata HOM05D004797 ORTHO05D005752 6.7e-63 245.4 230 55.2
Lalb_Chr01g0001051 Lupinus albus HOM05D004797 ORTHO05D005752 6.7e-63 245.4 196 57.7
Phvul.011G022800 Phaseolus vulgaris HOM05D004797 ORTHO05D005752 6.7e-63 245.4 203 54.7
BolC6t35774H Brassica oleracea HOM05D004797 ORTHO05D005752 8.8e-63 245.0 233 53.6
VMungo1127G0838 Vigna mungo HOM05D004797 ORTHO05D005752 8.8e-63 245.0 196 56.6
EL10Ac4g10215 Beta vulgaris HOM05D004797 ORTHO05D005752 1.1e-62 244.6 193 58.5
SalBow8G4383 Salvia bowleyana HOM05D004797 ORTHO05D005752 1.5e-62 244.2 200 58.0
Hund07473 Selenicereus undatus HOM05D004797 ORTHO05D005752 1.5e-62 244.2 193 59.1
DCAR_029965 Daucus carota HOM05D004797 ORTHO05D005752 2.0e-62 243.8 232 52.6
Rhsim01G0192400 Rhododendron simsii HOM05D004797 ORTHO05D005752 2.0e-62 243.8 234 52.6
HanXRQChr01g0023561 Helianthus annuus HOM05D004797 ORTHO05D005752 2.6e-62 243.4 193 57.5
Sed0009811 Sechium edule HOM05D004797 ORTHO05D005752 2.6e-62 243.4 230 53.5
Lj3g0024081 Lotus japonicus HOM05D004797 ORTHO05D005752 3.3e-62 243.0 196 57.7
Sabra09G0037500 Salix brachista HOM05D004797 ORTHO05D005752 4.4e-62 242.7 253 51.8
SHI29796 Sapria himalayana HOM05D004797 ORTHO05D005752 4.4e-62 242.7 232 53.9
vmacro04134 Vaccinium macrocarpon HOM05D004797 ORTHO05D005752 4.4e-62 242.7 189 60.3
Glyma.11G093700 Glycine max HOM05D004797 ORTHO05D005752 5.7e-62 242.3 196 56.1
TPR.G13744 Trifolium pratense HOM05D004797 ORTHO05D005752 5.7e-62 242.3 196 57.7
Glyma.12G020200 Glycine max HOM05D004797 ORTHO05D005752 7.4e-62 241.9 196 56.1
Lalb_Chr03g0024481 Lupinus albus HOM05D004797 ORTHO05D005752 1.3e-61 241.1 193 57.5
Actinidia16344 Actinidia chinensis HOM05D004797 ORTHO05D005752 1.7e-61 240.7 231 52.4
A06p02480 Brassica napus HOM05D004797 ORTHO05D005752 2.2e-61 240.4 194 59.8
CSS0044227 Camellia sinensis var. sinensis HOM05D004797 ORTHO05D005752 2.2e-61 240.4 192 59.4
BraA06t23454Z Brassica rapa HOM05D004797 ORTHO05D005752 2.8e-61 240.0 195 59.5
PSO339G4480 Papaver somniferum HOM05D004797 ORTHO05D005752 2.8e-61 240.0 196 54.6
PGR119G1354 Punica granatum HOM05D004797 ORTHO05D005752 6.3e-61 238.8 295 45.1
ATR0733G130 Amborella trichopoda HOM05D004797 ORTHO05D005752 2.0e-59 233.8 223 53.8
SEGI_00529 Sequoiadendron giganteum HOM05D004797 ORTHO05D005752 4.5e-59 232.6 240 50.4
Cfa009790 Carpinus fangiana HOM05D004797 ORTHO05D005752 8.5e-58 228.4 171 62.6
Ca_18973_v3 Cicer arietinum L. HOM05D004797 ORTHO05D005752 4.2e-57 226.1 177 59.3
Ca_29677_v3 Cicer arietinum L. HOM05D004797 ORTHO05D005752 4.2e-57 226.1 177 59.3
Rhsim13G0218000 Rhododendron simsii HOM05D004797 ORTHO05D005752 5.5e-57 225.7 290 42.1
Psat7g172280 Pisum sativum HOM05D004797 ORTHO05D005752 7.2e-57 225.3 177 59.9
Actinidia23978 Actinidia chinensis HOM05D004797 ORTHO05D005752 3.6e-56 223.0 208 52.4
Lj1A320G11 Lonicera japonica HOM05D004797 ORTHO05D005752 3.6e-56 223.0 171 60.2
FvH4_3g28490 Fragaria vesca HOM05D004797 ORTHO05D005752 8.8e-55 218.4 168 60.7
unitig_60.g25644 Utricularia gibba HOM05D004797 ORTHO05D005752 3.3e-54 216.5 196 56.1
Haze_23164 Corylus avellana HOM05D004797 ORTHO05D005752 5.7e-54 215.7 176 58.5
Migut.L00239 Erythranthe guttata HOM05D004797 ORTHO05D005752 5.7e-54 215.7 206 54.4
SMO361G0750 Selaginella moellendorffii HOM05D004797 ORTHO05D005752 7.5e-54 215.3 176 58.0
unitig_27.g24997 Utricularia gibba HOM05D004797 ORTHO05D005752 8.2e-53 211.8 277 40.4
Migut.L00817 Erythranthe guttata HOM05D004797 ORTHO05D005752 1.4e-52 211.1 176 58.5
Zm00001eb287480 Zea mays HOM05D004797 ORTHO05D005752 2.4e-52 210.3 125 76.0
Zm00001eb115730 Zea mays HOM05D004797 ORTHO05D005752 3.1e-52 209.9 124 76.6
CiPaw.13G156600 Carya illinoinensis HOM05D004797 ORTHO05D005752 3.5e-51 206.5 234 46.2
AagrBONN_evm.TU.Sc2ySwM_228.213 Anthoceros agrestis HOM05D004797 ORTHO05D005752 1.2e-48 198.0 228 46.9
CSS0012701 Camellia sinensis var. sinensis HOM05D004797 ORTHO05D005752 8.0e-48 195.3 225 45.8
HPP92_012392 Vanilla planifolia HOM05D004797 ORTHO05D005752 1.0e-47 194.9 147 59.2
Cc01_g04890 Coffea canephora HOM05D004797 ORTHO05D005752 4.4e-46 189.5 141 62.4
Pp3c12_10080 Physcomitrium patens HOM05D004797 ORTHO05D005752 4.4e-46 189.5 232 44.0
CBR_g54630 Chara braunii HOM05D004797 ORTHO05D005752 4.8e-45 186.0 230 44.8
Mapoly0036s0095 Marchantia polymorpha HOM05D004797 ORTHO05D005752 2.4e-44 183.7 232 45.3
CBR_g19286 Chara braunii HOM05D004797 ORTHO05D005752 7.0e-44 182.2 197 46.2
CiPaw.13G157500 Carya illinoinensis HOM05D004797 ORTHO05D005752 2.7e-43 180.3 208 46.2
Aqoxy3G02211 Aquilegia oxysepala HOM05D004797 ORTHO05D004745 5.2e-39 166.0 177 48.6
CBR_g54627 Chara braunii HOM05D004797 ORTHO05D005752 5.2e-39 166.0 193 46.6
Aqoxy3G03849 Aquilegia oxysepala HOM05D004797 ORTHO05D005752 6.8e-39 165.6 177 48.6
CDE02G1762 Ceratophyllum demersum HOM05D004797 ORTHO05D005752 4.4e-38 162.9 168 50.6
Cre16.g670250 Chlamydomonas reinhardtii HOM05D004797 ORTHO05D005752 2.3e-34 150.6 172 46.5
Pp3c23_9320 Physcomitrium patens HOM05D004797 ORTHO05D005752 8.6e-34 148.7 141 52.5
QL01p004191 Quercus lobata HOM05D004797 ORTHO05D005752 1.9e-33 147.5 115 59.1
CDE06G0667 Ceratophyllum demersum HOM05D004328 ORTHO05D005210 8.0e-32 142.1 233 36.5
PRCOL_00001849 Prasinoderma coloniale HOM05D004797 ORTHO05D005752 2.3e-31 140.6 158 45.6
CDE02G2983 Ceratophyllum demersum HOM05D004797 ORTHO05D005752 6.4e-29 132.5 222 37.4
CDE06G1612 Ceratophyllum demersum HOM05D004797 ORTHO05D005752 2.2e-13 80.9 232 27.6
Sed0024369 Sechium edule HOM05D004797 ORTHO05D005752 1.7e-10 71.2 117 35.0


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