Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0145100 Oryza sativa ssp. japonica HOM05D007273 ORTHO05D009230 1.7e-140 502.7 257 100.0
Os12g0142600 Oryza sativa ssp. japonica HOM05D007273 ORTHO05D009230 4.2e-131 471.5 253 95.3
Zm00001eb163370 Zea mays HOM05D007273 ORTHO05D009230 1.5e-99 366.7 258 73.6
HPP92_016047 Vanilla planifolia HOM05D007273 ORTHO05D009230 8.1e-58 228.0 240 53.3
Nn2g15217 Nelumbo nucifera HOM05D007273 ORTHO05D009230 3.4e-48 196.1 247 47.4
Dinv12487 Davidia involucrata HOM05D007273 ORTHO05D009230 9.3e-46 188.0 245 47.8
TAR369G0984 Trochodendron aralioides HOM05D007273 ORTHO05D009230 3.5e-45 186.0 247 47.0
Actinidia39224 Actinidia chinensis HOM05D007273 ORTHO05D009230 4.6e-45 185.7 264 45.8
Migut.J01756 Erythranthe guttata HOM05D007273 ORTHO05D009230 4.6e-45 185.7 225 48.0
MSTRG.6428 Avicennia marina HOM05D007273 ORTHO05D009230 5.1e-44 182.2 268 44.0
SalBow6G5536 Salvia bowleyana HOM05D007273 ORTHO05D009230 8.7e-44 181.4 235 45.1
vmacro07848 Vaccinium macrocarpon HOM05D007273 ORTHO05D009230 8.7e-44 181.4 239 46.0
Rhsim03G0024900 Rhododendron simsii HOM05D007273 ORTHO05D009230 1.5e-43 180.6 247 45.7
FvH4_6g23860 Fragaria vesca HOM05D007273 ORTHO05D009230 2.5e-43 179.9 238 49.2
PSO384G4400 Papaver somniferum HOM05D007273 ORTHO05D009230 3.3e-43 179.5 254 40.2
FAN05G2271 Fragaria x ananassa HOM05D007273 ORTHO05D009230 7.4e-43 178.3 243 48.6
Haze_19853 Corylus avellana HOM05D007273 ORTHO05D009230 9.6e-43 177.9 239 47.7
Oeu017941.1 Olea europaea HOM05D007273 ORTHO05D009230 1.6e-42 177.2 252 44.8
SGA_v2.0_scaffold69G23119 Striga asiatica HOM05D007273 ORTHO05D009230 1.6e-42 177.2 249 41.8
HanXRQChr05g0128781 Helianthus annuus HOM05D007273 ORTHO05D009230 4.8e-42 175.6 242 44.6
Aqoxy1G00330 Aquilegia oxysepala HOM05D007273 ORTHO05D009230 1.1e-41 174.5 240 45.8
CiPaw.09G038500 Carya illinoinensis HOM05D007273 ORTHO05D009230 2.4e-41 173.3 233 47.2
EL10Ac3g07092 Beta vulgaris HOM05D007273 ORTHO05D009230 4.0e-41 172.6 234 44.4
SEGI_31103 Sequoiadendron giganteum HOM05D007273 ORTHO05D009230 5.3e-41 172.2 258 43.0
PSO339G1789 Papaver somniferum HOM05D007273 ORTHO05D009230 6.9e-41 171.8 256 39.5
arahy.Tifrunner.gnm1.ann1.J7IQUN Arachis hypogaea HOM05D007273 ORTHO05D009230 2.0e-40 170.2 241 46.5
AUR62024452 Chenopodium quinoa HOM05D007273 ORTHO05D009230 5.8e-40 168.7 254 41.3
Cfa016813 Carpinus fangiana HOM05D007273 ORTHO05D009230 1.3e-39 167.5 252 45.2
Cc06_g17580 Coffea canephora HOM05D007273 ORTHO05D009230 1.7e-39 167.2 263 41.8
Prupe.7G059600 Prunus persica HOM05D007273 ORTHO05D009230 1.7e-39 167.2 237 46.0
Psat3g072760 Pisum sativum HOM05D007273 ORTHO05D009230 2.2e-39 166.8 242 46.7
Peaxi162Scf00002g02715 Petunia axillaris HOM05D007273 ORTHO05D009230 2.9e-39 166.4 255 42.4
Sc25g0005300 Simmondsia chinensis HOM05D007273 ORTHO05D009230 2.9e-39 166.4 241 43.6
CAN.G417.4 Capsicum annuum HOM05D007273 ORTHO05D009230 4.9e-39 165.6 249 43.0
CsaV3_4G011670 Cucumis sativus L. HOM05D007273 ORTHO05D009230 4.9e-39 165.6 252 42.1
Nitab4.5_0000082g0140 Nicotiana tabacum HOM05D007273 ORTHO05D009230 4.9e-39 165.6 249 41.4
DCAR_003245 Daucus carota HOM05D007273 ORTHO05D009230 6.5e-39 165.2 249 41.8
Solyc02g087600.3 Solanum lycopersicum HOM05D007273 ORTHO05D009230 6.5e-39 165.2 246 42.7
Lj1g0021019 Lotus japonicus HOM05D007273 ORTHO05D009230 1.4e-38 164.1 259 44.0
AUR62026041 Chenopodium quinoa HOM05D007273 ORTHO05D009230 1.9e-38 163.7 251 40.6
ClCG04G000150 Citrullus lanatus HOM05D007273 ORTHO05D009230 1.9e-38 163.7 243 44.4
Phvul.001G131900 Phaseolus vulgaris HOM05D007273 ORTHO05D009230 1.9e-38 163.7 255 44.7
Glyma.03G136600 Glycine max HOM05D007273 ORTHO05D009230 2.5e-38 163.3 239 45.2
ECA247G0394 Erigeron canadensis HOM05D007273 ORTHO05D009230 3.2e-38 162.9 247 42.1
Lsat_1_v5_gn_9_29100 Lactuca sativa HOM05D007273 ORTHO05D009230 4.2e-38 162.5 243 42.4
Medtr7g091490 Medicago truncatula HOM05D007273 ORTHO05D009230 4.2e-38 162.5 234 44.9
VMungo1383G0084 Vigna mungo HOM05D007273 ORTHO05D009230 4.2e-38 162.5 239 45.2
Nitab4.5_0010316g0010 Nicotiana tabacum HOM05D007273 ORTHO05D009230 5.5e-38 162.2 228 43.4
PGSC0003DMG401001308 Solanum tuberosum HOM05D007273 ORTHO05D009230 9.3e-38 161.4 246 42.3
Ca_08456_v3 Cicer arietinum L. HOM05D007273 ORTHO05D009230 1.2e-37 161.0 228 47.8
RcHm_v2.0_Chr3g0482541 Rosa chinensis HOM05D007273 ORTHO05D009230 1.2e-37 161.0 245 44.5
Sopen02g032350 Solanum pennellii HOM05D007273 ORTHO05D009230 1.2e-37 161.0 246 42.3
Rhsim03G0024700 Rhododendron simsii HOM05D007273 ORTHO05D009230 1.6e-37 160.6 281 40.2
MBI17_g14625_MAGBIO Magnolia biondii HOM05D007273 ORTHO05D009230 4.6e-37 159.1 250 42.8
CANSAT80G0412 Cannabis sativa HOM05D007273 ORTHO05D009230 6.0e-37 158.7 235 43.0
CANSAT80G2704 Cannabis sativa HOM05D007273 ORTHO05D009230 1.0e-36 157.9 247 41.7
Eucgr.A02345 Eucalyptus grandis HOM05D007273 ORTHO05D009230 1.0e-36 157.9 255 42.7
Gohir.A09G121900 Gossypium hirsutum HOM05D007273 ORTHO05D009230 2.3e-36 156.8 235 45.1
Gorai.006G136300 Gossypium raimondii HOM05D007273 ORTHO05D009230 3.0e-36 156.4 249 43.0
Gohir.D09G118000 Gossypium hirsutum HOM05D007273 ORTHO05D009230 5.1e-36 155.6 249 43.0
Sed0019353 Sechium edule HOM05D007273 ORTHO05D009230 8.7e-36 154.8 226 42.9
Cpa.g.sc92.54 Carica papaya HOM05D007273 ORTHO05D009230 1.1e-35 154.5 228 44.7
COL.COLO4_28286 Corchorus olitorius HOM05D007273 ORTHO05D009230 1.1e-35 154.5 225 45.3
PGR004G1947 Punica granatum HOM05D007273 ORTHO05D009230 1.1e-35 154.5 216 45.8
Lalb_Chr01g0017311 Lupinus albus HOM05D007273 ORTHO05D009230 1.9e-35 153.7 260 43.8
Thhalv10017127m.g Eutrema salsugineum HOM05D007273 ORTHO05D009230 3.3e-35 152.9 248 41.9
Mapoly0023s0152 Marchantia polymorpha HOM05D007273 ORTHO05D009230 3.3e-35 152.9 294 37.1
Thecc.05G153100 Theobroma cacao HOM05D007273 ORTHO05D009230 7.4e-35 151.8 237 43.5
QL07p000584 Quercus lobata HOM05D007273 ORTHO05D009230 1.6e-34 150.6 248 41.9
Sp4g24020 Schrenkiella parvula HOM05D007273 ORTHO05D009230 1.6e-34 150.6 247 42.5
AT2G41750 Arabidopsis thaliana HOM05D007273 ORTHO05D009230 1.1e-33 147.9 253 39.5
CARHR136850 Cardamine hirsuta HOM05D007273 ORTHO05D009230 1.1e-33 147.9 250 41.6
ATR0626G250 Amborella trichopoda HOM05D007273 ORTHO05D009230 1.4e-33 147.5 343 33.5
AL4G40060 Arabidopsis lyrata HOM05D007273 ORTHO05D009230 4.1e-33 146.0 243 39.5
BcaNung02834 Brassica carinata HOM05D007273 ORTHO05D009230 1.5e-32 144.1 239 41.0
BolC4t21937H Brassica oleracea HOM05D003650 ORTHO05D004213 2.0e-32 143.7 267 39.0
Aa31LG1G23760 Aethionema arabicum HOM05D007273 ORTHO05D009230 2.6e-32 143.3 249 40.2
Pp3c17_17160 Physcomitrium patens HOM05D007273 ORTHO05D009230 3.4e-32 142.9 293 34.8
C04p02970 Brassica napus HOM05D007273 ORTHO05D009230 5.9e-32 142.1 246 40.2
Carub.0004s2403 Capsella rubella HOM05D007273 ORTHO05D009230 2.2e-31 140.2 247 39.7
A05p02510 Brassica napus HOM05D007273 ORTHO05D009230 3.8e-31 139.4 243 41.6
BraA05t19244Z Brassica rapa HOM05D007273 ORTHO05D009230 3.8e-31 139.4 243 41.6
Manes.09G022200 Manihot esculenta HOM05D007273 ORTHO05D009230 3.8e-31 139.4 251 40.2
Sabra06G0036200 Salix brachista HOM05D007273 ORTHO05D009230 1.9e-30 137.1 248 39.9
TWI74G1215 Tripterygium wilfordii HOM05D007273 ORTHO05D009230 3.2e-30 136.3 254 37.0
SMO240G0020 Selaginella moellendorffii HOM05D007273 ORTHO05D009230 1.6e-29 134.0 192 45.8
THA.LOC104802102 Tarenaya hassleriana HOM05D007273 ORTHO05D009230 2.1e-29 133.7 246 41.9
Potri.006G051600 Populus trichocarpa HOM05D007273 ORTHO05D009230 6.1e-29 132.1 256 37.5
MBI17_g36895_MAGBIO Magnolia biondii HOM05D007273 ORTHO05D009230 6.7e-28 128.6 216 43.5
Ciclev10033324m.g Citrus clementina HOM05D007273 ORTHO05D009230 1.9e-27 127.1 239 38.9
unitig_8.g4551 Utricularia gibba HOM05D007273 ORTHO05D009230 6.9e-25 118.6 131 51.9
FAN09G1358 Fragaria x ananassa HOM05D007273 ORTHO05D009230 3.2e-22 109.8 191 44.0
Rhsim03G0024400 Rhododendron simsii HOM05D007273 ORTHO05D009230 4.6e-21 105.9 122 52.5
Rhsim03G0024300 Rhododendron simsii HOM05D007273 ORTHO05D009230 3.9e-20 102.8 122 50.8
FAN02G1642 Fragaria x ananassa HOM05D007273 ORTHO05D009230 6.9e-17 92.0 133 43.6
Ah.04g151620 Amaranthus hybridus HOM05D007273 ORTHO05D009230 2.0e-16 90.5 220 32.7
Lju124C41T6 Lonicera japonica HOM05D007273 ORTHO05D009230 1.0e-15 88.2 111 47.7
AagrBONN_evm.TU.Sc2ySwM_228.793 Anthoceros agrestis HOM05D007273 ORTHO05D009230 2.9e-15 86.7 192 38.0
Hma1.2p1_1611F.1_g293550 Hydrangea macrophylla HOM05D007273 ORTHO05D009230 2.9e-15 86.7 136 38.2
Glyma.19G139000 Glycine max HOM05D007273 ORTHO05D009230 9.4e-14 81.6 97 50.5
MCO07G627 Micromonas commoda HOM05D007273 ORTHO05D009230 8.8e-12 75.1 268 30.2
CSS0001142 Camellia sinensis var. sinensis HOM05D007273 ORTHO05D009230 3.1e-09 66.6 111 39.6
Rhsim03G0023900 Rhododendron simsii HOM05D007273 ORTHO05D009230 2.0e-08 63.9 82 52.4
SMO339G0013 Selaginella moellendorffii HOM05D007003 ORTHO05D008499 1.9e-06 57.4 160 30.0


User provided reference genes

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