Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0130200 Oryza sativa ssp. japonica HOM05D007528 ORTHO05D008503 1.5e-155 552.7 276 100.0
Zm00001eb195960 Zea mays HOM05D007528 ORTHO05D008503 1.2e-75 287.3 263 60.1
MBI13_g02396_MAGBIO Magnolia biondii HOM05D007528 ORTHO05D008503 2.5e-57 226.5 243 51.0
arahy.Tifrunner.gnm1.ann1.ARK2IX Arachis hypogaea HOM05D007528 ORTHO05D008503 1.8e-55 220.3 198 55.6
TAR623G0014 Trochodendron aralioides HOM05D007528 ORTHO05D008503 4.0e-55 219.2 202 56.4
Aqoxy2G00067 Aquilegia oxysepala HOM05D007528 ORTHO05D008503 5.3e-55 218.8 197 56.9
Sabra06G0018500 Salix brachista HOM05D007528 ORTHO05D008503 6.9e-55 218.4 194 58.2
Ciclev10012580m.g Citrus clementina HOM05D007528 ORTHO05D008503 9.0e-55 218.0 200 57.0
ClCG10G016790 Citrullus lanatus HOM05D007528 ORTHO05D008503 3.4e-54 216.1 270 48.1
PGR042G1749 Punica granatum HOM05D007528 ORTHO05D008503 4.5e-54 215.7 236 51.7
Nn7g37298 Nelumbo nucifera HOM05D007528 ORTHO05D008503 7.6e-54 214.9 269 48.0
THA.LOC104803254 Tarenaya hassleriana HOM05D007528 ORTHO05D008503 1.0e-53 214.5 204 53.9
Carub.0004s2343 Capsella rubella HOM05D007528 ORTHO05D008503 1.3e-53 214.2 200 54.5
Cpa.g.sc33.188 Carica papaya HOM05D007528 ORTHO05D008503 1.7e-53 213.8 175 61.1
AL4G39090 Arabidopsis lyrata HOM05D007528 ORTHO05D008503 2.2e-53 213.4 199 54.3
AT2G41120 Arabidopsis thaliana HOM05D007528 ORTHO05D008503 3.8e-53 212.6 199 53.3
CSS0027135 Camellia sinensis var. sinensis HOM05D007528 ORTHO05D008503 3.8e-53 212.6 210 51.9
vmacro12911 Vaccinium macrocarpon HOM05D007528 ORTHO05D008503 4.9e-53 212.2 207 52.2
Glyma.19G123400 Glycine max HOM05D007528 ORTHO05D008503 6.5e-53 211.8 182 56.6
arahy.Tifrunner.gnm1.ann1.ZMQ31P Arachis hypogaea HOM05D007528 ORTHO05D008503 8.4e-53 211.5 181 55.8
PSO729G0248 Papaver somniferum HOM05D007528 ORTHO05D008503 1.1e-52 211.1 236 49.6
Manes.09G073900 Manihot esculenta HOM05D007528 ORTHO05D008503 1.4e-52 210.7 237 52.3
FvH4_1g29750 Fragaria vesca HOM05D007528 ORTHO05D008503 1.9e-52 210.3 198 56.1
QL11p009983 Quercus lobata HOM05D007528 ORTHO05D008503 1.9e-52 210.3 194 54.6
Sp4g23430 Schrenkiella parvula HOM05D007528 ORTHO05D008503 2.5e-52 209.9 254 47.6
FAN26G0883 Fragaria x ananassa HOM05D007528 ORTHO05D008503 3.2e-52 209.5 198 56.1
Dinv14550 Davidia involucrata HOM05D007528 ORTHO05D008503 4.2e-52 209.1 178 57.3
FAN28G2175 Fragaria x ananassa HOM05D007528 ORTHO05D008503 4.2e-52 209.1 198 56.1
Psat3g082960 Pisum sativum HOM05D007528 ORTHO05D008503 4.2e-52 209.1 196 53.6
Lalb_Chr22g0358311 Lupinus albus HOM05D007528 ORTHO05D008503 5.5e-52 208.8 194 55.2
MD12G1013500 Malus domestica HOM05D007528 ORTHO05D008503 5.5e-52 208.8 180 57.8
Cc06_g21080 Coffea canephora HOM05D007528 ORTHO05D008503 7.1e-52 208.4 189 55.0
Thhalv10017145m.g Eutrema salsugineum HOM05D007528 ORTHO05D008503 7.1e-52 208.4 196 54.6
RcHm_v2.0_Chr3g0495771 Rosa chinensis HOM05D007528 ORTHO05D008503 1.2e-51 207.6 212 52.8
TWI63G0885 Tripterygium wilfordii HOM05D007528 ORTHO05D008503 1.2e-51 207.6 195 54.4
Aa31LG3G960 Aethionema arabicum HOM05D007528 ORTHO05D008503 1.6e-51 207.2 213 50.2
Medtr7g088210 Medicago truncatula HOM05D007528 ORTHO05D008503 2.1e-51 206.8 191 52.9
Thecc.05G128400 Theobroma cacao HOM05D007528 ORTHO05D008503 2.1e-51 206.8 202 54.5
TPR.G23704 Trifolium pratense HOM05D007528 ORTHO05D008503 2.1e-51 206.8 180 55.0
GSVIVG01025860001 Vitis vinifera HOM05D007528 ORTHO05D008503 2.1e-51 206.8 191 55.5
Eucgr.A02169 Eucalyptus grandis HOM05D007528 ORTHO05D008503 3.5e-51 206.1 192 55.2
Potri.006G025200 Populus trichocarpa HOM05D007528 ORTHO05D008503 3.5e-51 206.1 200 55.5
Phvul.001G109000 Phaseolus vulgaris HOM05D007528 ORTHO05D008503 4.6e-51 205.7 215 51.2
BraA04t18594Z Brassica rapa HOM05D007528 ORTHO05D008503 6.0e-51 205.3 246 47.6
Duzib093G0275 Durio zibethinus HOM05D007528 ORTHO05D008503 6.0e-51 205.3 204 53.9
Lj1g0006388 Lotus japonicus HOM05D007528 ORTHO05D008503 1.0e-50 204.5 201 51.2
C04p68770 Brassica napus HOM05D007528 ORTHO05D008503 1.3e-50 204.1 191 55.0
COL.COLO4_08087 Corchorus olitorius HOM05D007528 ORTHO05D008503 1.3e-50 204.1 254 48.4
Ca_08340_v3 Cicer arietinum L. HOM05D007528 ORTHO05D008503 2.3e-50 203.4 187 53.5
Gohir.D01G187600 Gossypium hirsutum HOM05D007528 ORTHO05D008503 3.0e-50 203.0 199 54.3
CsaV3_3G039560 Cucumis sativus L. HOM05D007528 ORTHO05D008503 3.9e-50 202.6 232 49.1
CDE04G0261 Ceratophyllum demersum HOM05D007528 ORTHO05D008503 5.1e-50 202.2 177 55.4
Gorai.002G231000 Gossypium raimondii HOM05D007528 ORTHO05D008503 5.1e-50 202.2 199 54.3
Sed0015046 Sechium edule HOM05D007528 ORTHO05D008503 5.1e-50 202.2 236 48.7
MSTRG.19743 Avicennia marina HOM05D007528 ORTHO05D008503 8.7e-50 201.4 195 52.3
Lj2A414T28 Lonicera japonica HOM05D007528 ORTHO05D008503 8.7e-50 201.4 179 54.7
Gohir.A01G197400 Gossypium hirsutum HOM05D007528 ORTHO05D008503 1.1e-49 201.1 199 53.3
HanXRQChr04g0125621 Helianthus annuus HOM05D007528 ORTHO05D008503 1.1e-49 201.1 196 51.0
SEGI_20851 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 1.1e-49 201.1 187 56.7
BolC4t28382H Brassica oleracea HOM05D007528 ORTHO05D008503 1.9e-49 200.3 191 53.9
A04p31360 Brassica napus HOM05D007528 ORTHO05D008503 2.5e-49 199.9 246 46.7
DCAR_013508 Daucus carota HOM05D007528 ORTHO05D008503 2.5e-49 199.9 234 47.0
Nitab4.5_0000382g0060 Nicotiana tabacum HOM05D007528 ORTHO05D008503 3.3e-49 199.5 207 52.7
PGSC0003DMG400019757 Solanum tuberosum HOM05D007528 ORTHO05D008503 3.3e-49 199.5 192 51.6
Atru.chr8.936 Acer truncatum HOM05D007528 ORTHO05D008503 7.4e-49 198.4 188 53.7
Peaxi162Scf00183g00712 Petunia axillaris HOM05D007528 ORTHO05D008503 7.4e-49 198.4 232 46.6
Haze_09241 Corylus avellana HOM05D007528 ORTHO05D006305 1.6e-48 197.2 207 51.2
ECA236G1579 Erigeron canadensis HOM05D007528 ORTHO05D008503 2.2e-48 196.8 183 54.1
Oeu032951.1 Olea europaea HOM05D007528 ORTHO05D008503 3.7e-48 196.1 181 54.1
CANSAT21G0864 Cannabis sativa HOM05D007528 ORTHO05D008503 4.8e-48 195.7 210 49.0
ATR0307G122 Amborella trichopoda HOM05D007528 ORTHO05D008503 1.1e-47 194.5 197 51.3
Solyc03g044630.2 Solanum lycopersicum HOM05D007528 ORTHO05D008503 1.1e-47 194.5 192 51.0
EL10Ac5g11614 Beta vulgaris HOM05D007528 ORTHO05D008503 1.8e-47 193.7 209 47.8
BcaNung05626 Brassica carinata HOM05D007528 ORTHO05D008503 4.1e-47 192.6 251 46.6
Lsat_1_v5_gn_8_83941 Lactuca sativa HOM05D007528 ORTHO05D008503 4.1e-47 192.6 182 51.6
Prupe.7G017900 Prunus persica HOM05D007528 ORTHO05D008503 2.6e-46 189.9 159 59.1
Mapoly0168s0009 Marchantia polymorpha HOM05D007528 ORTHO05D008503 3.4e-46 189.5 196 50.5
SalBow6G5858 Salvia bowleyana HOM05D007528 ORTHO05D008503 5.9e-46 188.7 180 52.2
SalBow6G5282 Salvia bowleyana HOM05D007528 ORTHO05D008503 2.2e-45 186.8 210 47.6
Migut.J01598 Erythranthe guttata HOM05D007528 ORTHO05D008503 1.9e-44 183.7 178 50.6
AagrBONN_evm.TU.Sc2ySwM_344.4238 Anthoceros agrestis HOM05D007528 ORTHO05D008503 4.2e-44 182.6 199 50.8
CARHR136210 Cardamine hirsuta HOM05D007528 ORTHO05D008503 4.6e-43 179.1 180 53.3
SMO266G0100 Selaginella moellendorffii HOM05D007528 ORTHO05D008503 1.8e-42 177.2 186 51.1
CBR_g37627 Chara braunii HOM05D007528 ORTHO05D008503 9.7e-41 171.4 202 45.5
Pp3c21_6860 Physcomitrium patens HOM05D007528 ORTHO05D008503 5.3e-39 165.6 146 54.1
Rhsim10G0151800 Rhododendron simsii HOM05D007528 ORTHO05D008503 2.5e-36 156.8 125 58.4
CiPaw.13G169300 Carya illinoinensis HOM05D007528 ORTHO05D008503 5.1e-34 149.1 129 56.6
FAN19G0638 Fragaria x ananassa HOM05D007528 ORTHO05D008503 1.2e-27 127.9 130 53.1
BcaC02g12850 Brassica carinata HOM05D007528 ORTHO05D008503 2.2e-24 117.1 161 42.9
CAN.G1129.33 Capsicum annuum HOM05D007528 ORTHO05D008503 1.4e-23 114.4 124 50.0
Sopen03g008910 Solanum pennellii HOM05D007528 ORTHO05D008503 4.5e-22 109.4 124 47.6
unitig_21.g20663 Utricularia gibba HOM05D007528 ORTHO05D008503 7.7e-22 108.6 156 41.0
Glyma.03G119000 Glycine max HOM05D007528 ORTHO05D008503 2.8e-16 90.1 52 73.1
Glyma.03G119100 Glycine max HOM05D007528 ORTHO05D008503 2.8e-16 90.1 126 40.5
VMungo1383G2363 Vigna mungo HOM05D007528 ORTHO05D008503 7.0e-15 85.5 55 65.5
SEGI_18622 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 2.7e-14 83.6 62 61.3
FAN23G1305 Fragaria x ananassa HOM05D007528 ORTHO05D029410 2.7e-06 57.0 72 45.8


User provided reference genes

Program Settings