Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0107450 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 3.5e-32 141.0 69 100.0
Os12g0106550 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 3.3e-30 134.4 68 94.1
Zm00001eb163280 Zea mays HOM05D006941 ORTHO05D008361 3.1e-28 127.9 68 89.7
Zm00001eb094170 Zea mays HOM05D006941 ORTHO05D008361 1.2e-27 125.9 68 88.2
Gorai.005G056700 Gossypium raimondii HOM05D006941 ORTHO05D008361 4.9e-26 120.6 68 83.8
Gohir.A02G045400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 1.4e-25 119.0 68 82.4
Gohir.D02G051400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 1.4e-25 119.0 68 82.4
Manes.14G117300 Manihot esculenta HOM05D006941 ORTHO05D008361 1.6e-24 115.5 68 79.4
Manes.03G190000 Manihot esculenta HOM05D006941 ORTHO05D008361 2.7e-24 114.8 68 77.9
Duzib151G0434 Durio zibethinus HOM05D006941 ORTHO05D008361 6.0e-24 113.6 68 80.9
Thecc.04G275300 Theobroma cacao HOM05D006941 ORTHO05D008361 6.0e-24 113.6 68 77.9
FvH4_4g16990 Fragaria vesca HOM05D006941 ORTHO05D008361 1.0e-23 112.8 68 79.4
FAN07G2315 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.0e-23 112.8 68 79.4
FAN12G1403 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.0e-23 112.8 68 79.4
FAN12G3786 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.0e-23 112.8 68 79.4
CANSAT78G0092 Cannabis sativa HOM05D006941 ORTHO05D008361 1.7e-23 112.1 69 79.7
Atru.chr4.2738 Acer truncatum HOM05D006941 ORTHO05D008361 2.3e-23 111.7 66 77.3
Oeu010965.1 Olea europaea HOM05D006941 ORTHO05D008361 2.3e-23 111.7 66 80.3
EL10As5g23584 Beta vulgaris HOM05D006941 ORTHO05D008361 6.6e-23 110.2 67 80.6
Oeu029280.1 Olea europaea HOM05D006941 ORTHO05D008361 6.6e-23 110.2 68 77.9
Potri.005G071700 Populus trichocarpa HOM05D006941 ORTHO05D008361 8.6e-23 109.8 68 75.0
Carub.0005s2918 Capsella rubella HOM05D006941 ORTHO05D008361 1.1e-22 109.4 65 78.5
RcHm_v2.0_Chr4g0420661 Rosa chinensis HOM05D006941 ORTHO05D008361 1.1e-22 109.4 68 77.9
TWI53G0190 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 1.1e-22 109.4 65 76.9
PGR004G2827 Punica granatum HOM05D006941 ORTHO05D008361 1.5e-22 109.0 68 76.5
CiPaw.02G087700 Carya illinoinensis HOM05D006941 ORTHO05D008361 1.9e-22 108.6 68 75.0
FAN22G2172 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.9e-22 108.6 68 77.9
TWI09G0325 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 1.9e-22 108.6 66 75.8
ECA233G1626 Erigeron canadensis HOM05D006941 ORTHO05D008361 2.5e-22 108.2 68 77.9
FAN17G2868 Fragaria x ananassa HOM05D006941 ORTHO05D008361 2.5e-22 108.2 68 76.5
Lalb_Chr22g0358511 Lupinus albus HOM05D006941 ORTHO05D008361 2.5e-22 108.2 66 77.3
PSO302G0016 Papaver somniferum HOM05D006941 ORTHO05D008361 2.5e-22 108.2 68 76.5
Prupe.1G143700 Prunus persica HOM05D006941 ORTHO05D008361 2.5e-22 108.2 68 73.5
Ca_09608_v3 Cicer arietinum L. HOM05D006941 ORTHO05D008361 3.3e-22 107.8 67 76.1
HanXRQChr05g0154771 Helianthus annuus HOM05D006941 ORTHO05D008361 3.3e-22 107.8 64 81.2
Lj5g0014316 Lotus japonicus HOM05D006941 ORTHO05D008361 4.3e-22 107.5 66 78.8
Phvul.010G109000 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 4.3e-22 107.5 68 73.5
Phvul.L002281 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 4.3e-22 107.5 68 73.5
Glyma.13G132200 Glycine max HOM05D006941 ORTHO05D008361 5.6e-22 107.1 67 76.1
Phvul.007G158300 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 5.6e-22 107.1 67 74.6
Rhsim02G0014500 Rhododendron simsii HOM05D006941 ORTHO05D008361 5.6e-22 107.1 68 76.5
Glyma.10G044600 Glycine max HOM05D006941 ORTHO05D008361 9.6e-22 106.3 67 74.6
Sed0004518 Sechium edule HOM05D006941 ORTHO05D008361 9.6e-22 106.3 67 74.6
unitig_22.g6332 Utricularia gibba HOM05D006941 ORTHO05D008361 9.6e-22 106.3 67 74.6
QL06p006942 Quercus lobata HOM05D006941 ORTHO05D008361 1.2e-21 105.9 68 72.1
Eucgr.H03682 Eucalyptus grandis HOM05D006941 ORTHO05D008361 1.6e-21 105.5 68 73.5
Psat6g067840 Pisum sativum HOM05D006941 ORTHO05D008361 1.6e-21 105.5 67 73.1
Migut.G00223 Erythranthe guttata HOM05D006941 ORTHO05D008361 2.1e-21 105.1 67 74.6
Lalb_Chr14g0364951 Lupinus albus HOM05D006941 ORTHO05D008361 2.8e-21 104.8 66 75.8
vmacro15274 Vaccinium macrocarpon HOM05D006941 ORTHO05D008361 2.8e-21 104.8 71 73.2
SalBow1G8344 Salvia bowleyana HOM05D006941 ORTHO05D008361 3.6e-21 104.4 68 73.5
C08p37290 Brassica napus HOM05D006941 ORTHO05D008361 4.7e-21 104.0 65 75.4
BolC8t51307H Brassica oleracea HOM05D006941 ORTHO05D008361 4.7e-21 104.0 65 75.4
CARHR172790 Cardamine hirsuta HOM05D006941 ORTHO05D008361 4.7e-21 104.0 66 69.7
Eucgr.H03704 Eucalyptus grandis HOM05D006941 ORTHO05D008361 4.7e-21 104.0 68 72.1
Thhalv10006352m.g Eutrema salsugineum HOM05D006941 ORTHO05D008361 4.7e-21 104.0 65 75.4
Sp5g00970 Schrenkiella parvula HOM05D006941 ORTHO05D008361 4.7e-21 104.0 65 75.4
BcaC07g42761 Brassica carinata HOM05D006941 ORTHO05D008361 6.2e-21 103.6 65 75.4
Peaxi162Scf01067g00024 Petunia axillaris HOM05D006941 ORTHO05D008361 6.2e-21 103.6 66 74.2
Actinidia32379 Actinidia chinensis HOM05D006941 ORTHO05D008361 1.1e-20 102.8 68 72.1
A09p54410 Brassica napus HOM05D006941 ORTHO05D008361 1.4e-20 102.4 65 72.3
BraA09t40854Z Brassica rapa HOM05D006941 ORTHO05D008361 1.4e-20 102.4 65 72.3
Sabra07G0080600 Salix brachista HOM05D006941 ORTHO05D008361 1.4e-20 102.4 78 65.4
Aa31LG10G16360 Aethionema arabicum HOM05D006941 ORTHO05D008361 2.4e-20 101.7 64 75.0
AL5G45260 Arabidopsis lyrata HOM05D006941 ORTHO05D008361 2.4e-20 101.7 65 73.8
Nitab4.5_0001624g0050 Nicotiana tabacum HOM05D006941 ORTHO05D008361 3.1e-20 101.3 66 72.7
Solyc01g067820.3 Solanum lycopersicum HOM05D006941 ORTHO05D008361 3.1e-20 101.3 68 70.6
PGSC0003DMG400022846 Solanum tuberosum HOM05D006941 ORTHO05D008361 3.1e-20 101.3 68 70.6
CSS0029112 Camellia sinensis var. sinensis HOM05D006941 ORTHO05D008361 4.0e-20 100.9 66 71.2
Medtr1g068580 Medicago truncatula HOM05D006941 ORTHO05D008361 4.0e-20 100.9 66 74.2
AT3G62450 Arabidopsis thaliana HOM05D006941 ORTHO05D008361 6.9e-20 100.1 65 72.3
BcaB02g07336 Brassica carinata HOM05D006941 ORTHO05D008361 6.9e-20 100.1 59 79.7
Sopen01g029770 Solanum pennellii HOM05D006941 ORTHO05D008361 6.9e-20 100.1 67 73.1
Hund22020 Selenicereus undatus HOM05D006941 ORTHO05D008361 1.5e-19 99.0 66 75.8
THA.LOC104820449 Tarenaya hassleriana HOM05D006941 ORTHO05D008361 1.5e-19 99.0 63 71.4
Medtr2g005070 Medicago truncatula HOM05D006941 ORTHO05D008361 2.0e-19 98.6 65 73.8
DCAR_030574 Daucus carota HOM05D006941 ORTHO05D008361 4.4e-19 97.4 68 67.6
CAN.G1327.4 Capsicum annuum HOM05D006941 ORTHO05D008361 9.9e-19 96.3 68 67.6
SGA_v2.0_scaffold57G20266 Striga asiatica HOM05D006941 ORTHO05D008361 1.3e-18 95.9 97 55.7
ClCG06G005480 Citrullus lanatus HOM05D006941 ORTHO05D008361 2.9e-18 94.7 78 62.8
arahy.Tifrunner.gnm1.ann1.DDI179 Arachis hypogaea HOM05D006941 ORTHO05D008361 6.4e-18 93.6 81 64.2
Lj4g0022805 Lotus japonicus HOM05D006941 ORTHO05D008361 6.4e-18 93.6 66 72.7
arahy.Tifrunner.gnm1.ann1.UB09PE Arachis hypogaea HOM05D006941 ORTHO05D008361 8.4e-18 93.2 67 74.6
SHI00325 Sapria himalayana HOM05D006941 ORTHO05D008361 1.9e-17 92.0 64 70.3
SEGI_10041 Sequoiadendron giganteum HOM05D006941 ORTHO05D008361 1.9e-17 92.0 64 67.2
CDE02G1545 Ceratophyllum demersum HOM05D006941 ORTHO05D008361 3.0e-15 84.7 67 59.7
Haze_01039 Corylus avellana HOM05D006941 ORTHO05D008361 5.6e-14 80.5 68 63.2
RcHm_v2.0_Chr1g0363231 Rosa chinensis HOM05D006941 ORTHO05D008361 2.1e-13 78.6 50 76.0
MD16G1176900 Malus domestica HOM05D006941 ORTHO05D008361 2.8e-13 78.2 46 80.4
VMungo0464G0431 Vigna mungo HOM05D006941 ORTHO05D008361 3.6e-13 77.8 126 39.7
HanXRQChr15g0466771 Helianthus annuus HOM05D006941 ORTHO05D008361 6.2e-13 77.0 129 39.5
PGSC0003DMG400029912 Solanum tuberosum HOM05D006941 ORTHO05D008361 8.1e-13 76.6 50 72.0
Cfa015511 Carpinus fangiana HOM05D006941 ORTHO05D008361 1.8e-12 75.5 68 58.8
Sabra05G0058700 Salix brachista HOM05D006941 ORTHO05D008361 3.4e-11 71.2 162 32.7
SGA_v2.0_scaffold114G31931 Striga asiatica HOM05D006941 ORTHO05D008361 5.8e-11 70.5 49 67.3
vmacro16859 Vaccinium macrocarpon HOM05D000537 ORTHO05D000415 7.6e-11 70.1 38 81.6
BcaC07g40728 Brassica carinata HOM05D006941 ORTHO05D008361 3.8e-10 67.8 65 56.9
Atru.chr2.2418 Acer truncatum HOM05D006941 ORTHO05D008361 4.9e-10 67.4 36 83.3
Sc19g0004830 Simmondsia chinensis HOM05D006941 ORTHO05D008361 4.9e-10 67.4 37 83.8
COL.COLO4_13955 Corchorus olitorius HOM05D006941 ORTHO05D008361 8.4e-10 66.6 37 83.8
MSTRG.24772 Avicennia marina HOM05D006941 ORTHO05D008361 1.9e-09 65.5 38 76.3
Eucgr.H03709 Eucalyptus grandis HOM05D006941 ORTHO05D008361 2.4e-09 65.1 38 78.9
Lsat_1_v5_gn_2_28060 Lactuca sativa HOM05D006941 ORTHO05D008361 7.1e-09 63.5 56 58.9
VMungo0720G2266 Vigna mungo HOM05D006941 ORTHO05D008361 1.2e-08 62.8 37 78.4
Ciclev10006724m.g Citrus clementina HOM05D006941 ORTHO05D008361 1.6e-08 62.4 38 73.7
AagrBONN_evm.TU.Sc2ySwM_344.628 Anthoceros agrestis HOM05D006941 ORTHO05D008361 2.1e-08 62.0 40 70.0
Eucgr.H03675 Eucalyptus grandis HOM05D006941 ORTHO05D008361 2.7e-08 61.6 37 75.7
Oeu048197.1 Olea europaea HOM05D010625 ORTHO05D008361 6.0e-08 60.5 35 77.1
Medtr2g048470 Medicago truncatula HOM05D006941 ORTHO05D008361 1.0e-07 59.7 37 78.4
Dinv16400 Davidia involucrata HOM05D006941 ORTHO05D008361 2.3e-07 58.5 35 74.3
Mapoly0142s0032 Marchantia polymorpha HOM05D006941 ORTHO05D008361 6.7e-07 57.0 52 57.7
Pp3c4_20400 Physcomitrium patens HOM05D006941 ORTHO05D008361 1.9e-06 55.5 66 45.5
Eucgr.H03674 Eucalyptus grandis HOM05D025724 ORTHO05D008361 9.6e-06 53.1 37 67.6


User provided reference genes

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