Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0104240 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D011126 1.2e-164 583.2 308 100.0
Os12g0104200 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D011126 1.4e-101 373.6 279 73.5
Os04g0689800 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D011126 2.1e-52 210.3 308 41.9
Os10g0487600 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D011126 5.2e-51 205.7 302 45.4
Os10g0487500 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D011126 7.5e-50 201.8 241 49.8
Zm00001eb434210 Zea mays HOM05D010301 ORTHO05D011126 1.4e-48 197.6 301 43.9
Os01g0885500 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D011126 3.8e-46 189.5 308 41.2
Os08g0140700 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D011126 1.0e-43 181.4 327 41.0
Os08g0141000 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D011126 1.8e-43 180.6 322 40.4
Os11g0104220 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D011126 7.7e-39 165.2 174 54.6
Os11g0103800 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D011126 1.0e-35 154.8 129 61.2
Os12g0103150 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D011126 1.0e-35 154.8 126 63.5
Os12g0534700 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D011126 1.3e-33 147.9 241 40.7
Os12g0535300 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D011126 4.1e-32 142.9 249 40.6
Os12g0173400 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D011126 5.9e-31 139.0 298 36.9
Zm00001eb115980 Zea mays HOM05D010301 ORTHO05D011126 1.5e-26 124.4 297 34.7
Os11g0103550 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D298220 1.3e-22 111.3 137 50.4
Os03g0150700 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D011126 6.2e-20 102.4 258 36.4
Os05g0109400 Oryza sativa ssp. japonica HOM05D013011 ORTHO05D011126 5.8e-18 95.9 260 30.8
Os08g0140600 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D301186 7.5e-18 95.5 226 37.6
Os09g0120100 Oryza sativa ssp. japonica HOM05D013011 ORTHO05D011126 1.1e-16 91.7 250 30.0
Os12g0619700 Oryza sativa ssp. japonica HOM05D013011 ORTHO05D011126 2.1e-15 87.4 208 35.6
Os04g0640300 Oryza sativa ssp. japonica HOM05D013011 ORTHO05D011126 2.3e-14 84.0 196 33.7
Os03g0141700 Oryza sativa ssp. japonica HOM05D013011 ORTHO05D011126 1.1e-13 81.6 294 27.6
Os08g0134900 Oryza sativa ssp. japonica HOM05D013011 ORTHO05D011126 1.1e-13 81.6 195 32.8
Os08g0133600 Oryza sativa ssp. japonica HOM05D013011 ORTHO05D011126 2.5e-13 80.5 196 31.6
Os08g0555400 Oryza sativa ssp. japonica HOM05D013011 ORTHO05D011126 1.2e-12 78.2 256 30.5
Os07g0486400 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D295108 6.8e-11 72.4 79 45.6
Os08g0132600 Oryza sativa ssp. japonica HOM05D013011 ORTHO05D011126 5.8e-10 69.3 227 28.6
Os08g0132100 Oryza sativa ssp. japonica HOM05D013011 ORTHO05D011126 2.9e-09 67.0 227 28.6
Zm00001eb348360 Zea mays HOM05D037177 ORTHO05D011126 3.7e-09 66.6 205 28.3
Zm00001eb348380 Zea mays HOM05D037177 ORTHO05D011126 3.7e-09 66.6 205 28.3
Os12g0171600 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D293899 1.4e-08 64.7 78 44.9
Os12g0127500 Oryza sativa ssp. japonica HOM05D010127 ORTHO05D011126 3.2e-08 63.5 173 27.2
Os01g0187000 Oryza sativa ssp. japonica HOM05D013011 ORTHO05D011126 7.1e-08 62.4 142 32.4
Os12g0228350 Oryza sativa ssp. japonica HOM05D010127 ORTHO05D011126 1.2e-07 61.6 153 26.8
Os01g0590200 Oryza sativa ssp. japonica HOM05D030290 ORTHO05D030346 1.6e-07 61.2 256 27.0
Os12g0211000 Oryza sativa ssp. japonica HOM05D010127 ORTHO05D297194 1.3e-06 58.2 162 28.4
Zm00001eb348480 Zea mays HOM05D037177 ORTHO05D011126 1.7e-06 57.8 177 27.1
Os03g0107500 Oryza sativa ssp. japonica HOM05D010127 ORTHO05D011126 6.6e-06 55.8 151 25.2
Os08g0499400 Oryza sativa ssp. japonica HOM05D010127 ORTHO05D011126 8.6e-06 55.5 156 28.8


User provided reference genes

Program Settings