Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0104220 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D011126 6.7e-90 334.0 163 100.0
Os12g0104200 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D011126 3.6e-67 258.5 131 94.7
Os11g0104240 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D011126 8.3e-40 167.5 174 54.6
Os04g0689800 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D011126 2.4e-31 139.4 169 46.7
Os11g0103800 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D011126 1.0e-26 124.0 104 60.6
Os12g0103150 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D011126 1.4e-26 123.6 104 61.5
Os10g0487500 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D011126 1.7e-24 116.7 165 40.0
Os10g0487600 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D011126 1.4e-23 113.6 165 38.2
Zm00001eb434210 Zea mays HOM05D010301 ORTHO05D011126 3.5e-22 109.0 146 42.5
Os12g0173400 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D011126 1.7e-21 106.7 153 43.1
Os12g0534700 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D011126 7.3e-20 101.3 168 38.7
Os12g0535300 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D011126 9.5e-20 100.9 130 42.3
Os08g0140700 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D011126 1.8e-18 96.7 165 37.6
Os01g0885500 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D011126 8.9e-18 94.4 87 49.4
Os08g0141000 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D011126 8.9e-18 94.4 163 38.0
Zm00001eb115980 Zea mays HOM05D010301 ORTHO05D011126 1.2e-17 94.0 121 43.0
Os03g0150700 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D011126 1.2e-14 84.0 104 49.0
Os04g0640300 Oryza sativa ssp. japonica HOM05D013011 ORTHO05D011126 1.0e-13 80.9 163 31.3
Os09g0120100 Oryza sativa ssp. japonica HOM05D013011 ORTHO05D011126 8.0e-11 71.2 106 34.9
Os12g0619700 Oryza sativa ssp. japonica HOM05D013011 ORTHO05D011126 1.1e-10 70.9 71 46.5
Os12g0228350 Oryza sativa ssp. japonica HOM05D010127 ORTHO05D011126 1.8e-10 70.1 142 30.3
Os08g0133600 Oryza sativa ssp. japonica HOM05D013011 ORTHO05D011126 5.2e-10 68.6 153 30.7
Os01g0187000 Oryza sativa ssp. japonica HOM05D013011 ORTHO05D011126 1.2e-09 67.4 159 31.4
Os05g0109400 Oryza sativa ssp. japonica HOM05D013011 ORTHO05D011126 4.4e-09 65.5 81 38.3
Os08g0499400 Oryza sativa ssp. japonica HOM05D010127 ORTHO05D011126 9.8e-09 64.3 147 32.0
Os11g0103550 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D298220 1.3e-08 63.9 97 40.2
Os01g0590200 Oryza sativa ssp. japonica HOM05D030290 ORTHO05D030346 1.7e-08 63.5 93 37.6
Os08g0555400 Oryza sativa ssp. japonica HOM05D013011 ORTHO05D011126 3.7e-08 62.4 78 38.5
Os12g0127500 Oryza sativa ssp. japonica HOM05D010127 ORTHO05D011126 4.9e-08 62.0 149 30.9
Os12g0211000 Oryza sativa ssp. japonica HOM05D010127 ORTHO05D297194 6.4e-08 61.6 144 31.2
Os08g0134900 Oryza sativa ssp. japonica HOM05D013011 ORTHO05D011126 8.3e-08 61.2 102 34.3
Os09g0442000 Oryza sativa ssp. japonica HOM05D010127 ORTHO05D011126 8.3e-08 61.2 103 34.0
Os03g0107500 Oryza sativa ssp. japonica HOM05D010127 ORTHO05D011126 1.1e-07 60.8 140 29.3
Os03g0141700 Oryza sativa ssp. japonica HOM05D013011 ORTHO05D011126 1.1e-07 60.8 76 38.2
Os08g0132600 Oryza sativa ssp. japonica HOM05D013011 ORTHO05D011126 1.1e-07 60.8 99 34.3
Zm00001eb348480 Zea mays HOM05D037177 ORTHO05D011126 1.9e-07 60.1 165 28.5
Os08g0132100 Oryza sativa ssp. japonica HOM05D013011 ORTHO05D011126 3.2e-07 59.3 104 32.7
Os07g0486400 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D295108 5.4e-07 58.5 68 38.2
Zm00001eb348360 Zea mays HOM05D037177 ORTHO05D011126 5.4e-07 58.5 110 31.8
Zm00001eb348380 Zea mays HOM05D037177 ORTHO05D011126 5.4e-07 58.5 110 31.8
Zm00001eb232510 Zea mays HOM05D010127 ORTHO05D442809 2.7e-06 56.2 146 28.1
Os12g0171600 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D293899 7.8e-06 54.7 55 49.1


User provided reference genes

Program Settings