Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0103800 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D011126 4.3e-80 301.2 146 100.0
Os12g0103150 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D011126 2.7e-66 255.4 137 89.8
Os04g0689800 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D011126 1.3e-39 166.8 126 60.3
Os11g0104240 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D011126 3.8e-36 155.2 129 61.2
Os10g0487500 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D011126 2.8e-31 139.0 112 58.0
Os12g0534700 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D011126 1.8e-30 136.3 113 54.0
Os12g0535300 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D011126 3.1e-30 135.6 115 52.2
Os10g0487600 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D011126 6.9e-30 134.4 125 49.6
Zm00001eb434210 Zea mays HOM05D010301 ORTHO05D011126 2.6e-29 132.5 126 50.8
Os01g0885500 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D011126 1.0e-28 130.6 120 50.8
Os12g0173400 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D011126 2.2e-28 129.4 128 52.3
Os11g0104220 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D011126 1.2e-26 123.6 104 60.6
Os08g0140700 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D011126 6.1e-26 121.3 114 53.5
Os08g0141000 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D011126 2.6e-24 115.9 114 50.9
Os12g0104200 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D011126 1.8e-22 109.8 66 77.3
Zm00001eb115980 Zea mays HOM05D010301 ORTHO05D011126 3.4e-21 105.5 122 44.3
Os03g0150700 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D011126 3.8e-20 102.1 100 53.0
Os07g0486400 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D295108 3.0e-17 92.4 77 53.2
Os09g0120100 Oryza sativa ssp. japonica HOM05D013011 ORTHO05D011126 2.8e-15 85.9 109 35.8
Os11g0103550 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D298220 2.8e-15 85.9 53 77.4
Os05g0109400 Oryza sativa ssp. japonica HOM05D013011 ORTHO05D011126 6.3e-15 84.7 114 36.0
Os04g0640300 Oryza sativa ssp. japonica HOM05D013011 ORTHO05D011126 8.2e-15 84.3 120 36.7
Os12g0619700 Oryza sativa ssp. japonica HOM05D013011 ORTHO05D011126 6.5e-12 74.7 117 35.9
Os08g0555400 Oryza sativa ssp. japonica HOM05D013011 ORTHO05D011126 1.9e-11 73.2 101 37.6
Os03g0141700 Oryza sativa ssp. japonica HOM05D013011 ORTHO05D011126 1.6e-10 70.1 105 40.0
Os08g0134900 Oryza sativa ssp. japonica HOM05D013011 ORTHO05D011126 2.1e-10 69.7 88 39.8
Os12g0171600 Oryza sativa ssp. japonica HOM05D010301 ORTHO05D293899 3.6e-10 68.9 69 46.4
Zm00001eb348360 Zea mays HOM05D037177 ORTHO05D011126 3.6e-10 68.9 95 35.8
Zm00001eb348380 Zea mays HOM05D037177 ORTHO05D011126 3.6e-10 68.9 95 35.8
Zm00001eb348480 Zea mays HOM05D037177 ORTHO05D011126 3.6e-10 68.9 95 35.8
Os08g0132600 Oryza sativa ssp. japonica HOM05D013011 ORTHO05D011126 1.0e-09 67.4 89 40.4
Os01g0187000 Oryza sativa ssp. japonica HOM05D013011 ORTHO05D011126 1.4e-09 67.0 124 33.1
Os08g0132100 Oryza sativa ssp. japonica HOM05D013011 ORTHO05D011126 4.0e-09 65.5 89 39.3
Os08g0133600 Oryza sativa ssp. japonica HOM05D013011 ORTHO05D011126 3.3e-08 62.4 82 39.0
Os01g0590200 Oryza sativa ssp. japonica HOM05D030290 ORTHO05D030346 1.3e-07 60.5 99 36.4
Os12g0228350 Oryza sativa ssp. japonica HOM05D010127 ORTHO05D011126 1.7e-07 60.1 87 33.3
Os12g0127500 Oryza sativa ssp. japonica HOM05D010127 ORTHO05D011126 8.2e-07 57.8 94 34.0
Os10g0327800 Oryza sativa ssp. japonica HOM05D010127 ORTHO05D011126 2.4e-06 56.2 93 33.3


User provided reference genes

Program Settings