Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0103100 Oryza sativa ssp. japonica HOM05D006507 ORTHO05D007296 9.5e-201 703.4 371 100.0
Os12g0102700 Oryza sativa ssp. japonica HOM05D006507 ORTHO05D007296 2.2e-125 453.0 265 91.7
Zm00001eb246740 Zea mays HOM05D006507 ORTHO05D007296 6.5e-40 169.1 275 46.5
Nn2g12985 Nelumbo nucifera HOM05D006507 ORTHO05D007296 4.4e-12 76.6 322 29.2
Duzib170G0831 Durio zibethinus HOM05D006507 ORTHO05D007296 2.2e-08 64.3 228 30.3
CsaV3_6G021880 Cucumis sativus L. HOM05D006507 ORTHO05D007296 5.0e-08 63.2 179 33.0
Cc01_g11720 Coffea canephora HOM05D006507 ORTHO05D007296 1.1e-07 62.0 45 62.2
MELO3C025723.2 Cucumis melo HOM05D006507 ORTHO05D007296 1.5e-07 61.6 147 32.0
Medtr4g061110 Medicago truncatula HOM05D006507 ORTHO05D007296 2.5e-07 60.8 263 30.4
Gorai.001G129300 Gossypium raimondii HOM05D006507 ORTHO05D007296 3.2e-07 60.5 246 27.6
ClCG02G020740 Citrullus lanatus HOM05D006507 ORTHO05D007296 4.2e-07 60.1 185 33.5
Lj3g0018374 Lotus japonicus HOM05D006507 ORTHO05D007296 4.2e-07 60.1 40 67.5
Lalb_Chr19g0137491 Lupinus albus HOM05D006507 ORTHO05D007296 7.2e-07 59.3 41 68.3
Manes.11G139900 Manihot esculenta HOM05D006507 ORTHO05D007296 7.2e-07 59.3 233 28.8
Cpa.g.sc139.58 Carica papaya HOM05D006507 ORTHO05D007296 1.6e-06 58.2 69 50.7
SGA_v2.0_scaffold80G25739 Striga asiatica HOM05D006507 ORTHO05D007296 1.6e-06 58.2 84 40.5
PGR102G3212 Punica granatum HOM05D006507 ORTHO05D007296 2.1e-06 57.8 38 65.8
Gohir.D07G120101 Gossypium hirsutum HOM05D006507 ORTHO05D007296 2.7e-06 57.4 246 27.2
AL8G36760 Arabidopsis lyrata HOM05D006507 ORTHO05D007296 4.7e-06 56.6 233 30.5
RcHm_v2.0_Chr5g0061351 Rosa chinensis HOM05D006507 ORTHO05D007296 4.7e-06 56.6 49 55.1
Gohir.A07G115600 Gossypium hirsutum HOM05D006507 ORTHO05D007296 6.1e-06 56.2 212 28.3
TPR.G2995 Trifolium pratense HOM05D006507 ORTHO05D007296 6.1e-06 56.2 241 28.6
Aqoxy2G01879 Aquilegia oxysepala HOM05D006507 ORTHO05D007296 8.0e-06 55.8 207 31.4
HanXRQChr06g0183291 Helianthus annuus HOM05D006507 ORTHO05D007296 8.0e-06 55.8 101 29.7
Hma1.2p1_2156F.1_g315450 Hydrangea macrophylla HOM05D006507 ORTHO05D007296 8.0e-06 55.8 68 45.6


User provided reference genes

Program Settings