Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0102500 Oryza sativa ssp. japonica HOM05D003732 ORTHO05D004965 1.3e-10 68.2 31 100.0
HanXRQChr06g0175491 Helianthus annuus HOM05D003732 ORTHO05D004965 7.1e-09 62.4 31 87.1
Psat5g281400 Pisum sativum HOM05D003732 ORTHO05D004965 1.2e-08 61.6 31 87.1
Hund18963 Selenicereus undatus HOM05D003732 ORTHO05D004965 1.2e-08 61.6 31 87.1
ECA236G0640 Erigeron canadensis HOM05D003732 ORTHO05D004965 3.5e-08 60.1 31 87.1
CSS0010801 Camellia sinensis var. sinensis HOM05D003732 ORTHO05D004965 6.0e-08 59.3 31 87.1
Dinv06348 Davidia involucrata HOM05D003732 ORTHO05D004965 6.0e-08 59.3 31 83.9
vmacro14491 Vaccinium macrocarpon HOM05D003732 ORTHO05D004965 6.0e-08 59.3 31 87.1
GSVIVG01025089001 Vitis vinifera HOM05D003732 ORTHO05D004965 1.3e-07 58.2 31 83.9
CSS0019034 Camellia sinensis var. sinensis HOM05D003732 ORTHO05D004965 2.3e-07 57.4 31 83.9
Gohir.A03G035700 Gossypium hirsutum HOM05D003732 ORTHO05D004965 2.3e-07 57.4 31 80.6
Gohir.D03G132600 Gossypium hirsutum HOM05D003732 ORTHO05D004965 2.3e-07 57.4 31 80.6
Gorai.003G139600 Gossypium raimondii HOM05D003732 ORTHO05D004965 2.3e-07 57.4 31 80.6
Lj3g0021313 Lotus japonicus HOM05D003732 ORTHO05D004965 2.3e-07 57.4 31 83.9
Medtr2g095840 Medicago truncatula HOM05D003732 ORTHO05D004965 2.3e-07 57.4 31 83.9
TPR.G11613 Trifolium pratense HOM05D003732 ORTHO05D004965 2.3e-07 57.4 31 83.9
CSS0050219 Camellia sinensis var. sinensis HOM05D003732 ORTHO05D004965 3.0e-07 57.0 30 86.7
FAN11G1631 Fragaria x ananassa HOM05D003732 ORTHO05D004965 3.0e-07 57.0 31 80.6
Manes.11G138400 Manihot esculenta HOM05D003732 ORTHO05D004965 3.9e-07 56.6 31 83.9
RcHm_v2.0_Chr5g0061771 Rosa chinensis HOM05D003732 ORTHO05D004965 3.9e-07 56.6 31 80.6
arahy.Tifrunner.gnm1.ann1.B493EM Arachis hypogaea HOM05D003732 ORTHO05D004965 5.1e-07 56.2 31 80.6
COL.COLO4_18395 Corchorus olitorius HOM05D003732 ORTHO05D004965 5.1e-07 56.2 31 77.4
QL01p035526 Quercus lobata HOM05D003732 ORTHO05D004965 5.1e-07 56.2 30 83.3
TWI79G1305 Tripterygium wilfordii HOM05D003732 ORTHO05D004965 5.1e-07 56.2 31 77.4
Cpa.g.sc139.33 Carica papaya HOM05D003732 ORTHO05D004965 6.7e-07 55.8 31 80.6
AUR62009702 Chenopodium quinoa HOM05D003732 ORTHO05D004965 6.7e-07 55.8 31 80.6
HanXRQChr05g0133971 Helianthus annuus HOM05D003732 ORTHO05D004965 6.7e-07 55.8 31 77.4
Thecc.09G335200 Theobroma cacao HOM05D003732 ORTHO05D004965 6.7e-07 55.8 31 80.6
arahy.Tifrunner.gnm1.ann1.58CB50 Arachis hypogaea HOM05D003732 ORTHO05D004965 8.7e-07 55.5 31 80.6
EL10Ac7g15885 Beta vulgaris HOM05D003732 ORTHO05D004965 8.7e-07 55.5 31 80.6
Cfa011398 Carpinus fangiana HOM05D003732 ORTHO05D004965 8.7e-07 55.5 31 80.6
Ca_01368_v3 Cicer arietinum L. HOM05D003732 ORTHO05D004965 8.7e-07 55.5 31 80.6
FvH4_3g34120 Fragaria vesca HOM05D003732 ORTHO05D004965 8.7e-07 55.5 31 77.4
Potri.001G233300 Populus trichocarpa HOM05D003732 ORTHO05D004965 8.7e-07 55.5 31 83.9
Rhsim01G0223000 Rhododendron simsii HOM05D003732 ORTHO05D004965 8.7e-07 55.5 31 83.9
Sabra16G0139500 Salix brachista HOM05D003732 ORTHO05D004965 8.7e-07 55.5 31 83.9
TAR633G0632 Trochodendron aralioides HOM05D003732 ORTHO05D004965 8.7e-07 55.5 31 80.6
MELO3C026850.2 Cucumis melo HOM05D003732 ORTHO05D004965 1.1e-06 55.1 31 74.2
CsaV3_1G012760 Cucumis sativus L. HOM05D003732 ORTHO05D004965 1.1e-06 55.1 31 74.2
DCAR_005290 Daucus carota HOM05D003732 ORTHO05D004965 1.5e-06 54.7 31 77.4
Hma1.2p1_2042F.1_g312240 Hydrangea macrophylla HOM05D003732 ORTHO05D004965 1.5e-06 54.7 31 77.4
Nitab4.5_0003743g0020 Nicotiana tabacum HOM05D003732 ORTHO05D004965 1.5e-06 54.7 31 74.2
Peaxi162Scf00616g00312 Petunia axillaris HOM05D003732 ORTHO05D004965 1.5e-06 54.7 31 74.2
HPP92_018603 Vanilla planifolia HOM05D003732 ORTHO05D004965 1.5e-06 54.7 31 74.2
ATR0594G008 Amborella trichopoda HOM05D003732 ORTHO05D004965 1.9e-06 54.3 31 77.4
Haze_23969 Corylus avellana HOM05D003732 ORTHO05D004965 1.9e-06 54.3 31 80.6
VMungo1080G0314 Vigna mungo HOM05D003732 ORTHO05D004965 1.9e-06 54.3 31 80.6
CAN.G84.23 Capsicum annuum HOM05D003732 ORTHO05D004965 2.5e-06 53.9 31 77.4
FAN21G0728 Fragaria x ananassa HOM05D003732 ORTHO05D004965 2.5e-06 53.9 31 77.4
Glyma.13G330100 Glycine max HOM05D003732 ORTHO05D004965 2.5e-06 53.9 31 77.4
Lalb_Chr24g0394381 Lupinus albus HOM05D003732 ORTHO05D004965 2.5e-06 53.9 31 77.4
PGR102G1443 Punica granatum HOM05D003732 ORTHO05D004965 2.5e-06 53.9 31 80.6
Sopen12g032610 Solanum pennellii HOM05D003732 ORTHO05D004965 2.5e-06 53.9 31 71.0
CAN.G84.24 Capsicum annuum HOM05D003732 ORTHO05D004965 3.3e-06 53.5 31 71.0
CAN.G84.25 Capsicum annuum HOM05D003732 ORTHO05D004965 3.3e-06 53.5 31 71.0
FAN25G0838 Fragaria x ananassa HOM05D003732 ORTHO05D004965 3.3e-06 53.5 31 77.4
SalBow3G0013 Salvia bowleyana HOM05D003732 ORTHO05D004965 3.3e-06 53.5 31 80.6
Solyc11g072640.3 Solanum lycopersicum HOM05D003732 ORTHO05D004965 3.3e-06 53.5 31 71.0
AUR62036244 Chenopodium quinoa HOM05D003732 ORTHO05D004965 4.3e-06 53.1 31 77.4
Lj2C1044T10 Lonicera japonica HOM05D003732 ORTHO05D004965 4.3e-06 53.1 31 77.4
Nn2g10611 Nelumbo nucifera HOM05D003732 ORTHO05D004965 4.3e-06 53.1 31 77.4
Nitab4.5_0003743g0010 Nicotiana tabacum HOM05D003732 ORTHO05D004965 4.3e-06 53.1 31 74.2
Nitab4.5_0004465g0030 Nicotiana tabacum HOM05D003732 ORTHO05D004965 4.3e-06 53.1 31 71.0
PGSC0003DMG400025357 Solanum tuberosum HOM05D003732 ORTHO05D004965 4.3e-06 53.1 31 71.0
Aqoxy4G03155 Aquilegia oxysepala HOM05D003732 ORTHO05D004965 5.6e-06 52.8 31 74.2
Duzib168G0288 Durio zibethinus HOM05D003732 ORTHO05D004965 5.6e-06 52.8 31 77.4
HanXRQChr05g0133981 Helianthus annuus HOM05D003732 ORTHO05D004965 5.6e-06 52.8 30 76.7
Phvul.L001386 Phaseolus vulgaris HOM05D003732 ORTHO05D004965 5.6e-06 52.8 31 77.4
Sopen11g030310 Solanum pennellii HOM05D003732 ORTHO05D004965 5.6e-06 52.8 31 67.7
Ciclev10028610m.g Citrus clementina HOM05D003732 ORTHO05D004965 7.4e-06 52.4 31 74.2
Migut.D02165 Erythranthe guttata HOM05D003732 ORTHO05D004965 9.6e-06 52.0 31 77.4
FAN16G2257 Fragaria x ananassa HOM05D003732 ORTHO05D004965 9.6e-06 52.0 31 74.2
SGA_v2.0_scaffold316G48397 Striga asiatica HOM05D003732 ORTHO05D004965 9.6e-06 52.0 31 77.4


User provided reference genes

Program Settings