Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os10g0568000 Oryza sativa ssp. japonica HOM05D012024 ORTHO05D012692 1.2e-211 739.6 362 100.0
Os07g0578125 Oryza sativa ssp. japonica HOM05D012024 ORTHO05D012692 4.7e-51 206.1 329 44.1
Os04g0279700 Oryza sativa ssp. japonica HOM05D012024 ORTHO05D012692 2.2e-48 197.2 235 52.3
Os03g0792300 Oryza sativa ssp. japonica HOM05D012024 ORTHO05D012692 4.5e-46 189.5 246 47.2
Zm00001eb330670 Zea mays HOM05D039943 ORTHO05D012692 1.0e-29 135.2 315 33.7
Os07g0530400 Oryza sativa ssp. japonica HOM05D012024 ORTHO05D012692 3.6e-27 126.7 332 34.0
Os08g0363000 Oryza sativa ssp. japonica HOM05D012024 ORTHO05D012692 2.7e-22 110.5 363 32.0
Os11g0549665 Oryza sativa ssp. japonica HOM05D012024 ORTHO05D012692 1.1e-20 105.1 220 35.9
Os08g0285100 Oryza sativa ssp. japonica HOM05D012024 ORTHO05D012692 2.3e-18 97.4 135 45.9
Os05g0123400 Oryza sativa ssp. japonica HOM05D012024 ORTHO05D012692 8.9e-18 95.5 188 38.3
Os03g0113200 Oryza sativa ssp. japonica HOM05D012024 ORTHO05D012692 1.5e-17 94.7 374 29.4
Os07g0591300 Oryza sativa ssp. japonica HOM05D012024 ORTHO05D012692 1.2e-14 85.1 121 44.6
TAR628G1200 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.6e-14 84.7 352 27.6
PSO170G4594 Papaver somniferum HOM05D000151 ORTHO05D000074 1.3e-13 81.6 353 27.5
Zm00001eb318110 Zea mays HOM05D026349 ORTHO05D012692 3.8e-13 80.1 331 29.0
Dinv39566 Davidia involucrata HOM05D000151 ORTHO05D000074 6.6e-13 79.3 345 27.5
Os04g0486300 Oryza sativa ssp. japonica HOM05D012024 ORTHO05D012692 1.5e-12 78.2 209 34.4
Os11g0231400 Oryza sativa ssp. japonica HOM05D012024 ORTHO05D012692 1.9e-12 77.8 323 28.2
Migut.C00911 Erythranthe guttata HOM05D000151 ORTHO05D000074 7.3e-12 75.9 343 25.9
Zm00001eb318130 Zea mays HOM05D026349 ORTHO05D012692 2.1e-11 74.3 124 43.5
Os07g0177000 Oryza sativa ssp. japonica HOM05D012024 ORTHO05D012692 1.0e-10 72.0 222 32.4
Nn6g31858 Nelumbo nucifera HOM05D000151 ORTHO05D000074 1.4e-10 71.6 344 25.6
Cc10_g00920 Coffea canephora HOM05D000151 ORTHO05D000074 3.0e-10 70.5 358 26.5
SGA_v2.0_scaffold351G49652 Striga asiatica HOM05D000151 ORTHO05D000074 6.8e-10 69.3 350 25.7
TAR376G0686 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.2e-09 68.6 313 26.8
MSTRG.1137 Avicennia marina HOM05D000151 ORTHO05D000074 2.0e-09 67.8 347 26.2
CSS0022996 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 3.4e-09 67.0 350 27.1
Prupe.1G358000 Prunus persica HOM05D000151 ORTHO05D000074 4.4e-09 66.6 350 25.7
MD15G1005500 Malus domestica HOM05D000151 ORTHO05D000074 5.8e-09 66.2 355 26.2
Zm00001eb302450 Zea mays HOM05D026349 ORTHO05D012692 2.2e-08 64.3 335 26.9
MD08G1006100 Malus domestica HOM05D000151 ORTHO05D000074 2.9e-08 63.9 352 26.1
CANSAT25G2327 Cannabis sativa HOM05D000151 ORTHO05D000074 4.9e-08 63.2 265 29.1
Zm00001eb037910 Zea mays HOM05D039943 ORTHO05D012692 6.4e-08 62.8 96 41.7
Os11g0593100 Oryza sativa ssp. japonica HOM05D000151 ORTHO05D000074 1.4e-07 61.6 390 25.4
PGSC0003DMG400012149 Solanum tuberosum HOM05D000151 ORTHO05D000074 7.0e-07 59.3 348 24.4
Os03g0783800 Oryza sativa ssp. japonica HOM05D026349 ORTHO05D012692 1.6e-06 58.2 79 45.6
Rhsim13G0207700 Rhododendron simsii HOM05D004351 ORTHO05D005196 2.0e-06 57.8 348 25.3
PGSC0003DMG400012282 Solanum tuberosum HOM05D000151 ORTHO05D000074 2.0e-06 57.8 341 24.6
Sopen03g032220 Solanum pennellii HOM05D000151 ORTHO05D000074 3.5e-06 57.0 333 24.9
TWI12G0155 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 3.5e-06 57.0 152 32.9
PGSC0003DMG400018078 Solanum tuberosum HOM05D000151 ORTHO05D000074 4.6e-06 56.6 336 24.4
Glyma.04G019900 Glycine max HOM05D000151 ORTHO05D000074 7.8e-06 55.8 316 24.7


User provided reference genes

Program Settings