Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os10g0534600 Oryza sativa ssp. japonica HOM05D008480 ORTHO05D014227 4.5e-231 804.3 422 100.0
Os06g0126100 Oryza sativa ssp. japonica HOM05D008480 ORTHO05D014227 3.6e-71 273.1 297 58.2
Zm00001eb378670 Zea mays HOM05D008480 ORTHO05D014227 3.5e-58 229.9 315 48.9
Zm00001eb269340 Zea mays HOM05D008480 ORTHO05D014227 2.1e-55 220.7 299 48.2
Os01g0253050 Oryza sativa ssp. japonica HOM05D008480 ORTHO05D014227 2.7e-42 177.2 265 48.3
Zm00001eb117800 Zea mays HOM05D008480 ORTHO05D029783 7.9e-26 122.5 305 36.4
Os01g0136850 Oryza sativa ssp. japonica HOM05D008480 ORTHO05D025987 4.6e-18 96.7 303 34.3
Os12g0609025 Oryza sativa ssp. japonica HOM05D008480 ORTHO05D037103 7.9e-18 95.9 287 39.0
Os01g0689975 Oryza sativa ssp. japonica HOM05D008480 ORTHO05D025987 6.7e-17 92.8 258 35.7
Os09g0531650 Oryza sativa ssp. japonica HOM05D008480 ORTHO05D014227 6.7e-17 92.8 177 42.4
Os06g0253350 Oryza sativa ssp. japonica HOM05D008480 ORTHO05D029783 5.7e-16 89.7 350 36.3
Os12g0595900 Oryza sativa ssp. japonica HOM05D008480 ORTHO05D016367 2.2e-15 87.8 178 41.6
SHI12945 Sapria himalayana HOM05D008480 ORTHO05D014227 2.8e-15 87.4 248 32.7
Zm00001eb124850 Zea mays HOM05D008480 ORTHO05D443079 1.4e-14 85.1 297 35.4
Os02g0787250 Oryza sativa ssp. japonica HOM05D017598 ORTHO05D016367 5.3e-14 83.2 312 36.9
Zm00001eb312090 Zea mays HOM05D021010 ORTHO05D037253 3.2e-11 73.9 300 33.7
SGA_v2.0_scaffold75G25029 Striga asiatica HOM05D008480 ORTHO05D014227 1.6e-10 71.6 266 29.7
Os09g0455000 Oryza sativa ssp. japonica HOM05D008480 ORTHO05D030372 7.9e-10 69.3 109 46.8
Os05g0550900 Oryza sativa ssp. japonica HOM05D008480 ORTHO05D025987 1.8e-09 68.2 162 39.5
Zm00001eb266120 Zea mays HOM05D008480 ORTHO05D014227 3.0e-09 67.4 96 44.8
Os12g0608633 Oryza sativa ssp. japonica HOM05D008480 ORTHO05D037103 6.7e-09 66.2 259 32.8
Os03g0776150 Oryza sativa ssp. japonica HOM05D022215 ORTHO05D049817 2.5e-08 64.3 146 40.4
Os08g0514033 Oryza sativa ssp. japonica HOM05D008480 ORTHO05D016367 3.3e-08 63.9 169 35.5
Zm00001eb029480 Zea mays HOM05D008480 ORTHO05D029783 3.3e-08 63.9 257 32.7
Zm00001eb335480 Zea mays HOM05D008480 ORTHO05D025987 4.3e-08 63.5 191 33.5
Os04g0584201 Oryza sativa ssp. japonica HOM05D008480 ORTHO05D049950 7.4e-08 62.8 229 34.9
SGA_v2.0_scaffold3G01803 Striga asiatica HOM05D008480 ORTHO05D030372 9.7e-08 62.4 145 36.6
Os02g0712650 Oryza sativa ssp. japonica HOM05D008480 ORTHO05D016367 2.2e-07 61.2 175 36.6
Os03g0825850 Oryza sativa ssp. japonica HOM05D045666 ORTHO05D293117 3.7e-07 60.5 140 40.0
Os08g0427550 Oryza sativa ssp. japonica HOM05D021010 ORTHO05D037253 3.7e-07 60.5 160 36.9
Zm00001eb283410 Zea mays HOM05D008480 ORTHO05D037059 3.7e-07 60.5 207 34.3
Zm00001eb377360 Zea mays HOM05D008480 ORTHO05D030372 6.3e-07 59.7 310 31.6
Os03g0228901 Oryza sativa ssp. japonica HOM05D008480 ORTHO05D049821 1.1e-06 58.9 148 36.5
Zm00001eb043600 Zea mays HOM05D008480 ORTHO05D443241 1.1e-06 58.9 258 33.7
Zm00001eb316140 Zea mays HOM05D008480 ORTHO05D049821 1.1e-06 58.9 142 36.6
Os11g0232400 Oryza sativa ssp. japonica HOM05D008480 ORTHO05D295517 1.8e-06 58.2 164 36.0
Zm00001eb009860 Zea mays HOM05D022215 ORTHO05D049817 9.1e-06 55.8 85 48.2


User provided reference genes

Program Settings