Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os10g0514550 Oryza sativa ssp. japonica HOM05D012244 ORTHO05D016550 3.4e-153 545.0 289 100.0
Os10g0514425 Oryza sativa ssp. japonica HOM05D012244 ORTHO05D016550 1.4e-61 240.7 135 91.1
Os10g0515100 Oryza sativa ssp. japonica HOM05D012244 ORTHO05D015673 7.7e-49 198.4 169 68.0
Os01g0350100 Oryza sativa ssp. japonica HOM05D012244 ORTHO05D016550 4.7e-30 136.0 149 56.4
Os10g0516000 Oryza sativa ssp. japonica HOM05D012244 ORTHO05D015673 2.3e-29 133.7 90 84.4
Potri.013G076501 Populus trichocarpa HOM05D012244 ORTHO05D016550 2.2e-27 127.1 113 62.8
Manes.08G163522 Manihot esculenta HOM05D012244 ORTHO05D016550 1.4e-21 107.8 119 54.6
Aqoxy1G00985 Aquilegia oxysepala HOM05D012244 ORTHO05D016550 4.1e-18 96.3 99 61.6
SGA_v2.0_scaffold90G27727 Striga asiatica HOM05D012244 ORTHO05D016550 1.1e-15 88.2 75 60.0
Zm00001eb245970 Zea mays HOM05D029904 ORTHO05D013369 1.6e-14 84.3 252 36.1
Os08g0547951 Oryza sativa ssp. japonica HOM05D012244 ORTHO05D013369 2.9e-11 73.6 99 47.5
ClCG02G007730 Citrullus lanatus HOM05D012244 ORTHO05D016550 4.2e-10 69.7 161 36.0
HanXRQChr14g0456371 Helianthus annuus HOM05D012244 ORTHO05D016550 6.0e-09 65.9 73 49.3
SGA_v2.0_scaffold90G27816 Striga asiatica HOM05D013340 ORTHO05D013369 5.1e-08 62.8 186 36.6
RcHm_v2.0_Chr7g0200261 Rosa chinensis HOM05D013340 ORTHO05D013369 1.5e-07 61.2 104 38.5
Lsat_1_v5_gn_2_102440 Lactuca sativa HOM05D012244 ORTHO05D016550 2.5e-07 60.5 69 49.3


User provided reference genes

Program Settings