Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os10g0514425 Oryza sativa ssp. japonica HOM05D012244 ORTHO05D016550 2.2e-70 268.9 136 100.0
Os10g0514550 Oryza sativa ssp. japonica HOM05D012244 ORTHO05D016550 2.2e-62 242.3 135 91.1
Potri.013G076501 Populus trichocarpa HOM05D012244 ORTHO05D016550 4.3e-26 121.7 124 57.3
Os01g0350100 Oryza sativa ssp. japonica HOM05D012244 ORTHO05D016550 2.8e-25 119.0 135 53.3
Manes.08G163522 Manihot esculenta HOM05D012244 ORTHO05D016550 4.2e-21 105.1 119 52.9
SGA_v2.0_scaffold90G27727 Striga asiatica HOM05D012244 ORTHO05D016550 3.4e-15 85.5 75 58.7
Zm00001eb245970 Zea mays HOM05D029904 ORTHO05D013369 5.5e-13 78.2 99 49.5
Os08g0547951 Oryza sativa ssp. japonica HOM05D012244 ORTHO05D013369 9.4e-13 77.4 98 49.0
Aqoxy1G00985 Aquilegia oxysepala HOM05D012244 ORTHO05D016550 2.8e-09 65.9 72 56.9
ClCG02G007730 Citrullus lanatus HOM05D012244 ORTHO05D016550 1.1e-08 63.9 103 42.7
RcHm_v2.0_Chr7g0200261 Rosa chinensis HOM05D013340 ORTHO05D013369 1.8e-08 63.2 104 40.4
HanXRQChr14g0456371 Helianthus annuus HOM05D012244 ORTHO05D016550 1.0e-06 57.4 72 44.4
Lsat_1_v5_gn_2_102440 Lactuca sativa HOM05D012244 ORTHO05D016550 8.5e-06 54.3 66 47.0


User provided reference genes

Program Settings