Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os10g0495200 Oryza sativa ssp. japonica HOM05D009701 ORTHO05D012112 2.9e-90 337.4 233 100.0
Os10g0497432 Oryza sativa ssp. japonica HOM05D009701 ORTHO05D012112 1.5e-75 288.5 233 88.4
Os10g0497300 Oryza sativa ssp. japonica HOM05D009701 ORTHO05D012112 9.1e-68 262.7 233 73.4
Os10g0495100 Oryza sativa ssp. japonica HOM05D009701 ORTHO05D012112 1.5e-67 261.9 233 70.4
Os10g0499500 Oryza sativa ssp. japonica HOM05D009701 ORTHO05D012112 5.9e-59 233.4 195 74.9
Os08g0248400 Oryza sativa ssp. japonica HOM05D009701 ORTHO05D012112 3.0e-55 221.1 241 71.8
Os08g0107800 Oryza sativa ssp. japonica HOM05D009701 ORTHO05D012112 7.0e-36 156.8 197 57.4
Os08g0107700 Oryza sativa ssp. japonica HOM05D009701 ORTHO05D012112 5.2e-31 140.6 202 56.9
Os08g0110200 Oryza sativa ssp. japonica HOM05D009701 ORTHO05D012112 5.0e-26 124.0 207 54.1
Zm00001eb345170 Zea mays HOM05D009701 ORTHO05D012112 6.1e-24 117.1 137 48.9
Zm00001eb345130 Zea mays HOM05D009701 ORTHO05D012112 7.5e-22 110.2 137 47.4
Zm00001eb065260 Zea mays HOM05D009701 ORTHO05D012112 4.6e-19 100.9 172 39.5
Zm00001eb114490 Zea mays HOM05D009701 ORTHO05D012112 3.9e-18 97.8 172 38.4
Zm00001eb114660 Zea mays HOM05D009701 ORTHO05D012112 5.0e-18 97.4 172 38.4
Zm00001eb114520 Zea mays HOM05D009701 ORTHO05D012112 1.1e-17 96.3 140 43.6
Zm00001eb114600 Zea mays HOM05D009701 ORTHO05D012112 1.1e-17 96.3 172 37.8
Zm00001eb114690 Zea mays HOM05D009701 ORTHO05D012112 1.1e-17 96.3 172 37.8
Aqoxy4G01012 Aquilegia oxysepala HOM05D000162 ORTHO05D000090 3.5e-11 74.7 130 33.8
Actinidia06229 Actinidia chinensis HOM05D000162 ORTHO05D000090 1.3e-10 72.8 120 34.2
Nn3g18307 Nelumbo nucifera HOM05D000162 ORTHO05D000090 2.3e-10 72.0 114 31.6
Os10g0497366 Oryza sativa ssp. japonica HOM05D009701 ORTHO05D012112 1.5e-09 69.3 152 34.9
Os04g0350000 Oryza sativa ssp. japonica HOM05D009701 ORTHO05D012112 2.5e-09 68.6 102 43.1
Zm00001eb301710 Zea mays HOM05D009701 ORTHO05D012112 1.6e-08 65.9 95 40.0
Nn5g28361 Nelumbo nucifera HOM05D000162 ORTHO05D000090 2.1e-08 65.5 117 31.6
PSO063G5422 Papaver somniferum HOM05D000162 ORTHO05D000090 2.8e-08 65.1 80 41.2
Lsat_1_v5_gn_2_107460 Lactuca sativa HOM05D000162 ORTHO05D000090 4.7e-08 64.3 115 33.0
Lj1g0012010 Lotus japonicus HOM05D000162 ORTHO05D000090 6.2e-08 63.9 108 33.3
Aqoxy4G00879 Aquilegia oxysepala HOM05D000162 ORTHO05D000090 8.1e-08 63.5 75 40.0
SGA_v2.0_scaffold225G43016 Striga asiatica HOM05D000162 ORTHO05D000090 8.1e-08 63.5 124 36.3
PSO017G5411 Papaver somniferum HOM05D000162 ORTHO05D000090 1.1e-07 63.2 103 34.0
Actinidia04473 Actinidia chinensis HOM05D000162 ORTHO05D000090 1.4e-07 62.8 121 28.1
Nn1g02624 Nelumbo nucifera HOM05D000162 ORTHO05D000090 1.4e-07 62.8 122 27.9
CiPaw.08G119900 Carya illinoinensis HOM05D000162 ORTHO05D000090 1.8e-07 62.4 108 28.7
QL03p008266 Quercus lobata HOM05D000162 ORTHO05D000090 1.8e-07 62.4 126 33.3
QL05p070010 Quercus lobata HOM05D000162 ORTHO05D000090 1.8e-07 62.4 126 33.3
Dinv41259 Davidia involucrata HOM05D000162 ORTHO05D000090 2.3e-07 62.0 124 28.2
Gorai.009G377900 Gossypium raimondii HOM05D000162 ORTHO05D000090 2.3e-07 62.0 112 31.2
Migut.G01199 Erythranthe guttata HOM05D000162 ORTHO05D000090 4.0e-07 61.2 111 35.1
Dinv06480 Davidia involucrata HOM05D000162 ORTHO05D000090 5.2e-07 60.8 128 29.7
Migut.G01191 Erythranthe guttata HOM05D000162 ORTHO05D000090 5.2e-07 60.8 111 31.5
Migut.G01207 Erythranthe guttata HOM05D000162 ORTHO05D000090 5.2e-07 60.8 85 36.5
Lalb_Chr05g0220111 Lupinus albus HOM05D000162 ORTHO05D000090 5.2e-07 60.8 108 33.3
MBI11_g34857_MAGBIO Magnolia biondii HOM05D000162 ORTHO05D000090 5.2e-07 60.8 72 40.3
RcHm_v2.0_Chr4g0414121 Rosa chinensis HOM05D000162 ORTHO05D000090 5.2e-07 60.8 69 42.0
Glyma.18G228500 Glycine max HOM05D000162 ORTHO05D000090 6.8e-07 60.5 115 33.0
Gorai.009G376400 Gossypium raimondii HOM05D000162 ORTHO05D000090 6.8e-07 60.5 126 30.2
Hma1.2p1_0310F.1_g120980 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 6.8e-07 60.5 124 32.3
Hma1.2p1_1276F.1_g272140 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 6.8e-07 60.5 124 32.3
Migut.G01171 Erythranthe guttata HOM05D000162 ORTHO05D000090 8.9e-07 60.1 63 42.9
Lsat_1_v5_gn_2_107320 Lactuca sativa HOM05D002667 ORTHO05D002909 8.9e-07 60.1 109 35.8
SalBow1G5498 Salvia bowleyana HOM05D000162 ORTHO05D000090 8.9e-07 60.1 115 34.8
VMungo1383G3689 Vigna mungo HOM05D000162 ORTHO05D000090 8.9e-07 60.1 114 31.6
Cc07_g18940 Coffea canephora HOM05D000162 ORTHO05D000090 1.2e-06 59.7 125 28.0
Migut.G01162 Erythranthe guttata HOM05D000162 ORTHO05D000090 1.2e-06 59.7 63 42.9
Migut.A01142 Erythranthe guttata HOM05D000162 ORTHO05D000090 1.5e-06 59.3 85 36.5
Phvul.008G069700 Phaseolus vulgaris HOM05D000162 ORTHO05D000090 1.5e-06 59.3 114 31.6
SalBow1G0248 Salvia bowleyana HOM05D000162 ORTHO05D000090 1.5e-06 59.3 115 34.8
Migut.G01172 Erythranthe guttata HOM05D000162 ORTHO05D000090 2.0e-06 58.9 85 36.5
QL04p064892 Quercus lobata HOM05D000162 ORTHO05D000090 2.0e-06 58.9 109 31.2
Aqoxy2G01058 Aquilegia oxysepala HOM05D000162 ORTHO05D000090 2.6e-06 58.5 62 43.5
Migut.G01156 Erythranthe guttata HOM05D000162 ORTHO05D000090 2.6e-06 58.5 76 39.5
Migut.G01181 Erythranthe guttata HOM05D000162 ORTHO05D000090 2.6e-06 58.5 54 48.1
Lsat_1_v5_gn_1_11600 Lactuca sativa HOM05D000162 ORTHO05D000090 2.6e-06 58.5 60 40.0
vmacro08418 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 2.6e-06 58.5 66 42.4
Aqoxy2G00962 Aquilegia oxysepala HOM05D000162 ORTHO05D000090 3.4e-06 58.2 121 33.9
Hma1.2p1_1276F.1_g272060 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 3.4e-06 58.2 114 31.6
Migut.G01173 Erythranthe guttata HOM05D000162 ORTHO05D000090 4.4e-06 57.8 123 29.3
Peaxi162Scf00129g00156 Petunia axillaris HOM05D000162 ORTHO05D000090 4.4e-06 57.8 126 30.2
SalBow2G3114 Salvia bowleyana HOM05D000162 ORTHO05D000090 4.4e-06 57.8 109 33.9
SalBow8G4095 Salvia bowleyana HOM05D003489 ORTHO05D004109 4.4e-06 57.8 80 40.0
Cc07_g18980 Coffea canephora HOM05D000162 ORTHO05D000090 5.8e-06 57.4 66 39.4
Cc07_g19010 Coffea canephora HOM05D000162 ORTHO05D000090 5.8e-06 57.4 66 39.4
Migut.G01182 Erythranthe guttata HOM05D000162 ORTHO05D000090 5.8e-06 57.4 122 28.7
Glyma.09G263602 Glycine max HOM05D000162 ORTHO05D000090 5.8e-06 57.4 114 30.7
QL04p064912 Quercus lobata HOM05D000162 ORTHO05D000090 5.8e-06 57.4 63 38.1
SalBow4G2488 Salvia bowleyana HOM05D000162 ORTHO05D000090 5.8e-06 57.4 94 35.1
AUR62000326 Chenopodium quinoa HOM05D000162 ORTHO05D000090 7.5e-06 57.0 51 47.1
Ciclev10007125m.g Citrus clementina HOM05D024618 ORTHO05D000090 7.5e-06 57.0 72 34.7
Migut.F00849 Erythranthe guttata HOM05D000162 ORTHO05D000090 7.5e-06 57.0 127 28.3
Migut.G00713 Erythranthe guttata HOM05D000162 ORTHO05D000090 7.5e-06 57.0 112 32.1
Migut.G01168 Erythranthe guttata HOM05D000162 ORTHO05D000090 7.5e-06 57.0 63 41.3
Lsat_1_v5_gn_3_111261 Lactuca sativa HOM05D000162 ORTHO05D000090 7.5e-06 57.0 124 31.5
Nn7g36861 Nelumbo nucifera HOM05D000162 ORTHO05D000090 7.5e-06 57.0 125 28.8
Rhsim04G0181600 Rhododendron simsii HOM05D000162 ORTHO05D000090 7.5e-06 57.0 139 28.1
Migut.G00832 Erythranthe guttata HOM05D000162 ORTHO05D000090 9.9e-06 56.6 54 46.3
Migut.G01052 Erythranthe guttata HOM05D000162 ORTHO05D000090 9.9e-06 56.6 63 41.3
Migut.G01161 Erythranthe guttata HOM05D000162 ORTHO05D000090 9.9e-06 56.6 122 27.9
Migut.G01166 Erythranthe guttata HOM05D000162 ORTHO05D000090 9.9e-06 56.6 63 42.9
Migut.G01170 Erythranthe guttata HOM05D000162 ORTHO05D000090 9.9e-06 56.6 85 35.3
Migut.G01184 Erythranthe guttata HOM05D000162 ORTHO05D000090 9.9e-06 56.6 124 29.0
PGR044G1745 Punica granatum HOM05D000162 ORTHO05D000090 9.9e-06 56.6 135 30.4
TWI75G1134 Tripterygium wilfordii HOM05D000162 ORTHO05D000090 9.9e-06 56.6 68 36.8


User provided reference genes

Program Settings