Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os10g0484300 Oryza sativa ssp. japonica HOM05D065286 ORTHO05D008371 1.0e-129 468.0 579 100.0
Zm00001eb121820 Zea mays HOM05D065286 ORTHO05D008371 2.3e-68 264.2 261 68.2
CsaV3_2G007050 Cucumis sativus L. HOM05D006888 ORTHO05D008371 2.9e-23 114.4 255 45.1
Thecc.05G322900 Theobroma cacao HOM05D006888 ORTHO05D008371 9.2e-17 92.8 165 49.7
Prupe.7G165800 Prunus persica HOM05D006888 ORTHO05D008371 5.9e-16 90.1 257 42.0
Psat5g196040 Pisum sativum HOM05D006888 ORTHO05D008371 2.3e-15 88.2 167 37.1
ATR0618G019 Amborella trichopoda HOM05D006888 ORTHO05D008371 1.9e-14 85.1 258 40.3
FvH4_6g07430 Fragaria vesca HOM05D006888 ORTHO05D008371 1.6e-13 82.0 219 45.2
A06p06540 Brassica napus HOM05D006888 ORTHO05D008371 2.8e-13 81.3 230 38.3
Cfa006701 Carpinus fangiana HOM05D006888 ORTHO05D008371 5.2e-12 77.0 179 34.6
FAN14G0975 Fragaria x ananassa HOM05D006888 ORTHO05D008371 6.8e-12 76.6 180 42.2
RcHm_v2.0_Chr3g0457031 Rosa chinensis HOM05D006888 ORTHO05D008371 2.0e-11 75.1 257 40.1
Ah.06g195940 Amaranthus hybridus HOM05D006888 ORTHO05D008371 2.6e-11 74.7 147 36.1
BolC5t29545H Brassica oleracea HOM05D006888 ORTHO05D008371 3.4e-11 74.3 192 33.3
C05p07930 Brassica napus HOM05D006888 ORTHO05D008371 7.5e-11 73.2 192 32.8
FAN02G2736 Fragaria x ananassa HOM05D006888 ORTHO05D008371 7.5e-11 73.2 137 54.7
SHI18058 Sapria himalayana HOM05D006888 ORTHO05D008371 7.5e-11 73.2 155 34.2
AUR62000398 Chenopodium quinoa HOM05D006888 ORTHO05D008371 2.2e-10 71.6 146 34.2
FAN09G2872 Fragaria x ananassa HOM05D006888 ORTHO05D008371 2.2e-10 71.6 170 47.6
Haze_04061 Corylus avellana HOM05D004265 ORTHO05D005175 2.9e-10 71.2 171 36.3
BcaC05g24842 Brassica carinata HOM05D006888 ORTHO05D008371 4.9e-10 70.5 134 37.3
EL10Ac4g09424 Beta vulgaris HOM05D006888 ORTHO05D008371 1.1e-09 69.3 173 30.1
MELO3C004188.2 Cucumis melo HOM05D006888 ORTHO05D008371 1.4e-09 68.9 184 31.0
THA.LOC104820294 Tarenaya hassleriana HOM05D006888 ORTHO05D008371 1.4e-09 68.9 226 38.5
Lsat_1_v5_gn_7_74401 Lactuca sativa HOM05D006888 ORTHO05D008371 1.9e-09 68.6 202 37.1
Psat5g195640 Pisum sativum HOM05D006888 ORTHO05D019275 4.1e-09 67.4 75 58.7
Thhalv10000737m.g Eutrema salsugineum HOM05D006888 ORTHO05D008371 9.2e-09 66.2 102 35.3
COL.COLO4_05553 Corchorus olitorius HOM05D004265 ORTHO05D005175 1.2e-08 65.9 179 34.6
Thhalv10009487m.g Eutrema salsugineum HOM05D006888 ORTHO05D008371 1.2e-08 65.9 177 31.6
BraA06t23865Z Brassica rapa HOM05D006888 ORTHO05D008371 1.6e-08 65.5 193 32.1
Carub.0001s0920 Capsella rubella HOM05D006888 ORTHO05D008371 2.0e-08 65.1 177 31.6
AUR62006754 Chenopodium quinoa HOM05D006888 ORTHO05D008371 2.7e-08 64.7 145 33.1
Sp1g08450 Schrenkiella parvula HOM05D006888 ORTHO05D008371 7.8e-08 63.2 177 32.8
GSVIVG01031237001 Vitis vinifera HOM05D006888 ORTHO05D008371 7.8e-08 63.2 166 31.3
AT1G09820 Arabidopsis thaliana HOM05D006888 ORTHO05D008371 1.3e-07 62.4 177 31.1
Cpa.g.sc113.34 Carica papaya HOM05D006888 ORTHO05D008371 1.3e-07 62.4 113 58.4
AL1G20420 Arabidopsis lyrata HOM05D006888 ORTHO05D008371 1.7e-07 62.0 157 32.5
CARHR009830 Cardamine hirsuta HOM05D006888 ORTHO05D008371 3.9e-07 60.8 169 32.5
Nn1g08113 Nelumbo nucifera HOM05D006888 ORTHO05D008371 3.9e-07 60.8 141 36.2
FAN19G0192 Fragaria x ananassa HOM05D006888 ORTHO05D008371 8.6e-07 59.7 166 34.3
FAN23G2816 Fragaria x ananassa HOM05D006888 ORTHO05D008371 8.6e-07 59.7 166 34.9
FAN28G0085 Fragaria x ananassa HOM05D006888 ORTHO05D008371 8.6e-07 59.7 166 34.3
ECA236G2032 Erigeron canadensis HOM05D004601 ORTHO05D005806 7.3e-06 56.6 190 45.3


User provided reference genes

Program Settings